RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 SERTAD4-AS1Q5TG53 156 aa8.36□□□□□ -1.07
LDB3-203ENST00000372056 C9orf163Q8N9P6 203 aa8.36□□□□□ -1.07
LDB3-203ENST00000372056 TGP01266 2768 aa8.35□□□□□ -1.07
LDB3-203ENST00000372056 LINC00643Q86TS7 51 aa8.34□□□□□ -1.07
LDB3-203ENST00000372056 TRBV7-6A0A0J9YX20 115 aa8.34□□□□□ -1.07
LDB3-203ENST00000372056 hADV29S1A0JD25 119 aa8.34□□□□□ -1.07
LDB3-203ENST00000372056 NKAPP1Q8N9T2 125 aa8.34□□□□□ -1.07
LDB3-203ENST00000372056 STARD9Q9P2P6 4700 aa8.33□□□□□ -1.08
LDB3-203ENST00000372056 C16orf90A8MZG2 172 aa8.33□□□□□ -1.08
LDB3-203ENST00000372056 ELOF1P60002 83 aaKnown RBP8.33□□□□□ -1.08
LDB3-203ENST00000372056 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
LDB3-203ENST00000372056 IGLV5-37A0A075B6J1 123 aa8.32□□□□□ -1.08
LDB3-203ENST00000372056 INAFM2P0DMQ5 153 aa8.32□□□□□ -1.08
LDB3-203ENST00000372056 COX7BP24311 80 aa8.32□□□□□ -1.08
LDB3-203ENST00000372056 C7orf33Q8WU49 177 aa8.32□□□□□ -1.08
LDB3-203ENST00000372056 DNAH10Q8IVF4 4471 aa8.32□□□□□ -1.08
LDB3-203ENST00000372056 SMCR5Q8TEV8 140 aa8.32□□□□□ -1.08
LDB3-203ENST00000372056 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
LDB3-203ENST00000372056 LINC00336Q6ZUF6 198 aa8.31□□□□□ -1.08
LDB3-203ENST00000372056 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.3□□□□□ -1.08
LDB3-203ENST00000372056 TMEM256-PLSCR3K7ERE1 68 aa8.3□□□□□ -1.08
LDB3-203ENST00000372056 KRTAP7-1Q8IUC3 87 aa8.3□□□□□ -1.08
LDB3-203ENST00000372056 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
LDB3-203ENST00000372056 FAM236AA0A1B0GUQ0 79 aa8.3□□□□□ -1.08
LDB3-203ENST00000372056 FAM236BA0A1B0GV22 79 aa8.3□□□□□ -1.08
LDB3-203ENST00000372056 SMIM20Q8N5G0 67 aa8.29□□□□□ -1.08
LDB3-203ENST00000372056 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
LDB3-203ENST00000372056 VPS13DQ5THJ4 4388 aa8.28□□□□□ -1.08
LDB3-203ENST00000372056 Q6ZQY7 126 aa8.28□□□□□ -1.08
LDB3-203ENST00000372056 C14orf132Q9NPU4 83 aa8.28□□□□□ -1.08
LDB3-203ENST00000372056 C3orf22Q8N5N4 141 aa8.27□□□□□ -1.09
LDB3-203ENST00000372056 IGLV1-50A0A075B6I6 118 aa8.26□□□□□ -1.09
LDB3-203ENST00000372056 A0A096LNI7 61 aa8.26□□□□□ -1.09
LDB3-203ENST00000372056 RTL8CO15255 209 aa8.26□□□□□ -1.09
LDB3-203ENST00000372056 FAM19A5Q7Z5A7 132 aaPredicted RBP8.26□□□□□ -1.09
LDB3-203ENST00000372056 IGLV5-52A0A0A0MRZ9 124 aa8.26□□□□□ -1.09
LDB3-203ENST00000372056 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
LDB3-203ENST00000372056 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
LDB3-203ENST00000372056 RPL37AP8A6NKH3 93 aa8.25□□□□□ -1.09
LDB3-203ENST00000372056 JMJD7-PLA2G4BH0Y9G9 81 aa8.25□□□□□ -1.09
LDB3-203ENST00000372056 H3BQ85 93 aa8.25□□□□□ -1.09
LDB3-203ENST00000372056 UQCRQO14949 82 aa8.25□□□□□ -1.09
LDB3-203ENST00000372056 HIST1H4AP62805 103 aaKnown RBP8.25□□□□□ -1.09
LDB3-203ENST00000372056 PRYO14603 147 aa8.24□□□□□ -1.09
LDB3-203ENST00000372056 GAGE2AQ6NT46 116 aa8.24□□□□□ -1.09
LDB3-203ENST00000372056 TNP2Q05952 138 aa8.23□□□□□ -1.09
LDB3-203ENST00000372056 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
LDB3-203ENST00000372056 SPRR1AP35321 89 aa8.23□□□□□ -1.09
LDB3-203ENST00000372056 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
LDB3-203ENST00000372056 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
LDB3-203ENST00000372056 C9orf153Q5TBE3 101 aa8.21□□□□□ -1.09
LDB3-203ENST00000372056 GHRHP01286 108 aa8.21□□□□□ -1.1
LDB3-203ENST00000372056 COX7CP15954 63 aa8.21□□□□□ -1.1
LDB3-203ENST00000372056 DNAH6Q9C0G6 4158 aa8.2□□□□□ -1.1
LDB3-203ENST00000372056 A0A1W2PNN7 141 aa8.2□□□□□ -1.1
LDB3-203ENST00000372056 Q6ZRX8 168 aa8.2□□□□□ -1.1
LDB3-203ENST00000372056 LAMTOR3Q9UHA4 124 aa8.2□□□□□ -1.1
LDB3-203ENST00000372056 CCKP06307 115 aa8.19□□□□□ -1.1
LDB3-203ENST00000372056 DPH3Q96FX2 82 aa8.19□□□□□ -1.1
LDB3-203ENST00000372056 EPM2AB3EWF7 344 aa8.19□□□□□ -1.1
LDB3-203ENST00000372056 ATOX1O00244 68 aa8.19□□□□□ -1.1
LDB3-203ENST00000372056 Q6JHZ5 121 aa8.19□□□□□ -1.1
LDB3-203ENST00000372056 ETDCA0A1B0GVM5 59 aa8.18□□□□□ -1.1
LDB3-203ENST00000372056 CHTF8P0CG12 524 aa8.18□□□□□ -1.1
LDB3-203ENST00000372056 CRYGAP11844 174 aa8.18□□□□□ -1.1
LDB3-203ENST00000372056 RBM3P98179 157 aaKnown RBP8.18□□□□□ -1.1
LDB3-203ENST00000372056 SPACA4Q8TDM5 124 aa8.18□□□□□ -1.1
LDB3-203ENST00000372056 DHRS4-AS1Q9P1J3 65 aa8.18□□□□□ -1.1
LDB3-203ENST00000372056 Q9BRP9 147 aa8.17□□□□□ -1.1
LDB3-203ENST00000372056 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
LDB3-203ENST00000372056 LOC110117498A0A087WWA1 95 aa8.16□□□□□ -1.1
LDB3-203ENST00000372056 Q6ZQT0 140 aa8.15□□□□□ -1.11
LDB3-203ENST00000372056 LINC00846Q9NV44 126 aa8.15□□□□□ -1.11
LDB3-203ENST00000372056 PLAC8Q9NZF1 115 aa8.14□□□□□ -1.11
LDB3-203ENST00000372056 KMT2AQ03164 3969 aa8.14□□□□□ -1.11
LDB3-203ENST00000372056 DSCR8Q96T75 97 aa8.13□□□□□ -1.11
LDB3-203ENST00000372056 RPS28P62857 69 aaKnown RBP8.13□□□□□ -1.11
LDB3-203ENST00000372056 TRBV7-4A0A0J9YYF1 115 aa8.12□□□□□ -1.11
LDB3-203ENST00000372056 PANO1I0J062 215 aa8.12□□□□□ -1.11
LDB3-203ENST00000372056 PDE6GP18545 87 aa8.12□□□□□ -1.11
LDB3-203ENST00000372056 LINC01547P58512 204 aaPredicted RBP8.12□□□□□ -1.11
LDB3-203ENST00000372056 UBE2BP63146 152 aa8.11□□□□□ -1.11
LDB3-203ENST00000372056 PHF5AQ7RTV0 110 aaKnown RBP8.11□□□□□ -1.11
LDB3-203ENST00000372056 Q8N377 158 aa8.11□□□□□ -1.11
LDB3-203ENST00000372056 DNAH2Q9P225 4427 aa8.11□□□□□ -1.11
LDB3-203ENST00000372056 J3KT08 172 aa8.11□□□□□ -1.11
LDB3-203ENST00000372056 KRTAP10-2P60368 255 aa8.11□□□□□ -1.11
LDB3-203ENST00000372056 DEFB105AQ8NG35 78 aa8.11□□□□□ -1.11
LDB3-203ENST00000372056 IGLV5-48A0A075B6I7 105 aa8.1□□□□□ -1.11
LDB3-203ENST00000372056 ERC2-IT1O76042 136 aa8.1□□□□□ -1.11
LDB3-203ENST00000372056 KRTAP11-1Q8IUC1 163 aa8.1□□□□□ -1.11
LDB3-203ENST00000372056 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
LDB3-203ENST00000372056 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
LDB3-203ENST00000372056 ST20-AS1Q8NBB2 130 aa8.09□□□□□ -1.11
LDB3-203ENST00000372056 IGKV3D-7A0A0C4DH55 119 aa8.09□□□□□ -1.12
LDB3-203ENST00000372056 H0Y9J4 135 aa8.09□□□□□ -1.12
LDB3-203ENST00000372056 Q6ZSA8 131 aa8.09□□□□□ -1.12
LDB3-203ENST00000372056 HECTD4Q9Y4D8 3996 aa8.07□□□□□ -1.12
LDB3-203ENST00000372056 PRLHP81277 87 aa8.07□□□□□ -1.12
LDB3-203ENST00000372056 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms