RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PDE6GP18545 87 aa11.79□□□□□ -0.52
UBQLN4-201ENST00000368309 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
UBQLN4-201ENST00000368309 GHRHP01286 108 aa11.79□□□□□ -0.52
UBQLN4-201ENST00000368309 BAHCC1Q9P281 2608 aa11.79□□□□□ -0.52
UBQLN4-201ENST00000368309 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
UBQLN4-201ENST00000368309 RPL37AP8A6NKH3 93 aa11.78□□□□□ -0.52
UBQLN4-201ENST00000368309 DEFB105AQ8NG35 78 aa11.78□□□□□ -0.52
UBQLN4-201ENST00000368309 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
UBQLN4-201ENST00000368309 F8WDY8 70 aa11.76□□□□□ -0.53
UBQLN4-201ENST00000368309 KCNQ1DNQ9H478 68 aa11.76□□□□□ -0.53
UBQLN4-201ENST00000368309 K7EIL1 84 aa11.72□□□□□ -0.53
UBQLN4-201ENST00000368309 HUWE1Q7Z6Z7 4374 aaKnown RBP11.72□□□□□ -0.53
UBQLN4-201ENST00000368309 TM2D3Q9BRN9 247 aa11.72□□□□□ -0.53
UBQLN4-201ENST00000368309 STAB2Q8WWQ8 2551 aa11.7□□□□□ -0.54
UBQLN4-201ENST00000368309 TLX1NBP0CAT3 122 aa11.69□□□□□ -0.54
UBQLN4-201ENST00000368309 Q8N377 158 aa11.69□□□□□ -0.54
UBQLN4-201ENST00000368309 KRTAP7-1Q8IUC3 87 aa11.69□□□□□ -0.54
UBQLN4-201ENST00000368309 CXCL6P80162 114 aa11.67□□□□□ -0.54
UBQLN4-201ENST00000368309 FAM19A5Q7Z5A7 132 aaPredicted RBP11.67□□□□□ -0.54
UBQLN4-201ENST00000368309 Q9BRP9 147 aa11.66□□□□□ -0.54
UBQLN4-201ENST00000368309 IGLV1-50A0A075B6I6 118 aa11.66□□□□□ -0.54
UBQLN4-201ENST00000368309 DNAH1Q9P2D7 4330 aa11.66□□□□□ -0.54
UBQLN4-201ENST00000368309 LYSTQ99698 3801 aa11.66□□□□□ -0.54
UBQLN4-201ENST00000368309 LOC107984640A0A0U1RRK4 108 aa11.65□□□□□ -0.54
UBQLN4-201ENST00000368309 C3orf84H3BNL1 204 aa11.65□□□□□ -0.54
UBQLN4-201ENST00000368309 Q6ZRX8 168 aa11.65□□□□□ -0.54
UBQLN4-201ENST00000368309 C20orf197Q8N268 126 aa11.65□□□□□ -0.54
UBQLN4-201ENST00000368309 ETDCA0A1B0GVM5 59 aa11.64□□□□□ -0.55
UBQLN4-201ENST00000368309 ST20-AS1Q8NBB2 130 aa11.64□□□□□ -0.55
UBQLN4-201ENST00000368309 RMI2Q96E14 147 aa11.64□□□□□ -0.55
UBQLN4-201ENST00000368309 PLA2G2DQ9UNK4 145 aa11.64□□□□□ -0.55
UBQLN4-201ENST00000368309 Q8N9L7 120 aa11.64□□□□□ -0.55
UBQLN4-201ENST00000368309 KRTAP4-16G5E9R7 235 aaPredicted RBP11.63□□□□□ -0.55
UBQLN4-201ENST00000368309 COL7A1Q02388 2944 aa11.62□□□□□ -0.55
UBQLN4-201ENST00000368309 DHRS4-AS1Q9P1J3 65 aa11.61□□□□□ -0.55
UBQLN4-201ENST00000368309 DNAH10Q8IVF4 4471 aa11.61□□□□□ -0.55
UBQLN4-201ENST00000368309 MRPL55Q7Z7F7 128 aaKnown RBP11.61□□□□□ -0.55
UBQLN4-201ENST00000368309 TENM2Q9NT68 2774 aa11.61□□□□□ -0.55
UBQLN4-201ENST00000368309 NREPQ16612 68 aa11.61□□□□□ -0.55
UBQLN4-201ENST00000368309 PRYO14603 147 aa11.6□□□□□ -0.55
UBQLN4-201ENST00000368309 ERC2-IT1O76042 136 aa11.6□□□□□ -0.55
UBQLN4-201ENST00000368309 IGLV5-37A0A075B6J1 123 aa11.59□□□□□ -0.55
UBQLN4-201ENST00000368309 KRTAP1-5Q9BYS1 174 aa11.59□□□□□ -0.55
UBQLN4-201ENST00000368309 SPRR1AP35321 89 aa11.59□□□□□ -0.55
UBQLN4-201ENST00000368309 TMEM258P61165 79 aa11.58□□□□□ -0.56
UBQLN4-201ENST00000368309 TRAV7A0A075B6U4 112 aa11.58□□□□□ -0.56
UBQLN4-201ENST00000368309 IGLV5-48A0A075B6I7 105 aa11.57□□□□□ -0.56
UBQLN4-201ENST00000368309 UBE2BP63146 152 aa11.57□□□□□ -0.56
UBQLN4-201ENST00000368309 IGKV2-24A0A0C4DH68 120 aa11.57□□□□□ -0.56
UBQLN4-201ENST00000368309 CSMD3Q7Z407 3707 aa11.55□□□□□ -0.56
UBQLN4-201ENST00000368309 DPH3Q96FX2 82 aa11.54□□□□□ -0.56
UBQLN4-201ENST00000368309 J3KT08 172 aa11.54□□□□□ -0.56
UBQLN4-201ENST00000368309 BPY2O14599 106 aa11.54□□□□□ -0.56
UBQLN4-201ENST00000368309 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
UBQLN4-201ENST00000368309 A0A1W2PNM2 257 aa11.53□□□□□ -0.56
UBQLN4-201ENST00000368309 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
UBQLN4-201ENST00000368309 PSCAO43653 123 aa11.52□□□□□ -0.56
UBQLN4-201ENST00000368309 BCE1O60756 84 aa11.52□□□□□ -0.56
UBQLN4-201ENST00000368309 A0A096LNI7 61 aa11.52□□□□□ -0.57
UBQLN4-201ENST00000368309 REG3GQ6UW15 175 aa11.52□□□□□ -0.57
UBQLN4-201ENST00000368309 FUSP35637 526 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBQLN4-201ENST00000368309 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.51□□□□□ -0.57
UBQLN4-201ENST00000368309 IGKV4-1P06312 121 aa11.51□□□□□ -0.57
UBQLN4-201ENST00000368309 DNAH9Q9NYC9 4486 aa11.5□□□□□ -0.57
UBQLN4-201ENST00000368309 A0A1W2PNN7 141 aa11.49□□□□□ -0.57
UBQLN4-201ENST00000368309 TNP2Q05952 138 aa11.49□□□□□ -0.57
UBQLN4-201ENST00000368309 UBE2DNLQ8IWF7 75 aa11.49□□□□□ -0.57
UBQLN4-201ENST00000368309 A0A0G2JQZ4 141 aa11.48□□□□□ -0.57
UBQLN4-201ENST00000368309 RPS28P62857 69 aaKnown RBP11.47□□□□□ -0.57
UBQLN4-201ENST00000368309 PRLHP81277 87 aa11.47□□□□□ -0.57
UBQLN4-201ENST00000368309 SRRM2Q9UQ35 2752 aaKnown RBP11.46□□□□□ -0.57
UBQLN4-201ENST00000368309 H7BZZ5 65 aa11.46□□□□□ -0.58
UBQLN4-201ENST00000368309 OXTP01178 125 aa11.45□□□□□ -0.58
UBQLN4-201ENST00000368309 C16orf90A8MZG2 172 aa11.45□□□□□ -0.58
UBQLN4-201ENST00000368309 Q8NBF4 154 aa11.44□□□□□ -0.58
UBQLN4-201ENST00000368309 CHTF8P0CG12 524 aa11.44□□□□□ -0.58
UBQLN4-201ENST00000368309 SMIM29Q86T20 159 aa11.43□□□□□ -0.58
UBQLN4-201ENST00000368309 KLKP1Q107X0 134 aa11.43□□□□□ -0.58
UBQLN4-201ENST00000368309 HIGD2AQ9BW72 106 aa11.43□□□□□ -0.58
UBQLN4-201ENST00000368309 APLNQ9ULZ1 77 aa11.43□□□□□ -0.58
UBQLN4-201ENST00000368309 DNAH7Q8WXX0 4024 aa11.43□□□□□ -0.58
UBQLN4-201ENST00000368309 CNBPP62633 177 aaKnown RBP11.42□□□□□ -0.58
UBQLN4-201ENST00000368309 LINC00476Q8WZB0 136 aa11.4□□□□□ -0.58
UBQLN4-201ENST00000368309 FAM236DA0A1B0GTK5 79 aa11.39□□□□□ -0.59
UBQLN4-201ENST00000368309 FAM236CP0DP71 79 aa11.39□□□□□ -0.59
UBQLN4-201ENST00000368309 F8WEM9 126 aa11.39□□□□□ -0.59
UBQLN4-201ENST00000368309 KRTAP11-1Q8IUC1 163 aa11.39□□□□□ -0.59
UBQLN4-201ENST00000368309 PHF5AQ7RTV0 110 aaKnown RBP11.38□□□□□ -0.59
UBQLN4-201ENST00000368309 SPRR4Q96PI1 79 aa11.38□□□□□ -0.59
UBQLN4-201ENST00000368309 SVIPQ8NHG7 77 aa11.38□□□□□ -0.59
UBQLN4-201ENST00000368309 A0A1B0GW54 56 aa11.36□□□□□ -0.59
UBQLN4-201ENST00000368309 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
UBQLN4-201ENST00000368309 MDFIQ99750 246 aa11.36□□□□□ -0.59
UBQLN4-201ENST00000368309 OCR1Q9BZK8 76 aa11.36□□□□□ -0.59
UBQLN4-201ENST00000368309 IGFL1Q6UW32 110 aa11.34□□□□□ -0.59
UBQLN4-201ENST00000368309 PLECQ15149 4684 aaKnown RBP11.34□□□□□ -0.59
UBQLN4-201ENST00000368309 DEFB116Q30KQ4 102 aa11.34□□□□□ -0.59
UBQLN4-201ENST00000368309 DSCR10P59022 87 aa11.33□□□□□ -0.6
UBQLN4-201ENST00000368309 FAM30AQ9NZY2 134 aa11.32□□□□□ -0.6
UBQLN4-201ENST00000368309 K7EQZ3 153 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms