RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 RGPD8O14715 1765 aaPredicted RBP-3.64□□□□□ -2.99
RNU6-340P-201ENST00000364005 RGPD4Q7Z3J3 1758 aa-3.64□□□□□ -2.99
RNU6-340P-201ENST00000364005 RGPD5Q99666 1765 aa-3.64□□□□□ -2.99
RNU6-340P-201ENST00000364005 SERPINB1P30740 379 aa-3.65□□□□□ -2.99
RNU6-340P-201ENST00000364005 OR9Q1Q8NGQ5 310 aa-3.65□□□□□ -2.99
RNU6-340P-201ENST00000364005 ATP6V1G3Q96LB4 118 aa-3.65□□□□□ -2.99
RNU6-340P-201ENST00000364005 LLPHQ9BRT6 129 aaKnown RBP-3.65□□□□□ -2.99
RNU6-340P-201ENST00000364005 UQCR10Q9UDW1 63 aa-3.65□□□□□ -2.99
RNU6-340P-201ENST00000364005 UBR1Q8IWV7 1749 aa-3.65□□□□□ -2.99
RNU6-340P-201ENST00000364005 KIF20BQ96Q89 1820 aa-3.65□□□□□ -2.99
RNU6-340P-201ENST00000364005 A2ML1A8K2U0 1454 aa-3.66□□□□□ -2.99
RNU6-340P-201ENST00000364005 ABCC5O15440 1437 aa-3.66□□□□□ -3
RNU6-340P-201ENST00000364005 PTRHD1Q6GMV3 140 aaKnown RBP-3.66□□□□□ -3
RNU6-340P-201ENST00000364005 MLH3Q9UHC1 1453 aa-3.67□□□□□ -3
RNU6-340P-201ENST00000364005 H0Y9P7 68 aa-3.67□□□□□ -3
RNU6-340P-201ENST00000364005 GNGT1P63211 74 aa-3.67□□□□□ -3
RNU6-340P-201ENST00000364005 DEFB107AQ8IZN7 70 aa-3.67□□□□□ -3
RNU6-340P-201ENST00000364005 PPP1R14BQ96C90 147 aa-3.67□□□□□ -3
RNU6-340P-201ENST00000364005 ERVK-7P63135 1459 aa-3.67□□□□□ -3
RNU6-340P-201ENST00000364005 TEX14Q8IWB6 1497 aa-3.67□□□□□ -3
RNU6-340P-201ENST00000364005 SYNMO15061 1565 aa-3.68□□□□□ -3
RNU6-340P-201ENST00000364005 LRRC7Q96NW7 1537 aa-3.68□□□□□ -3
RNU6-340P-201ENST00000364005 CDK5RAP2Q96SN8 1893 aa-3.68□□□□□ -3
RNU6-340P-201ENST00000364005 H3BQF6 201 aa-3.68□□□□□ -3
RNU6-340P-201ENST00000364005 TPM4P67936 248 aa-3.68□□□□□ -3
RNU6-340P-201ENST00000364005 PLIN4Q96Q06 1357 aa-3.68□□□□□ -3
RNU6-340P-201ENST00000364005 TNFSF15O95150 251 aa-3.69□□□□□ -3
RNU6-340P-201ENST00000364005 TMEM35BQ8NCS4 154 aa-3.69□□□□□ -3
RNU6-340P-201ENST00000364005 NCOA2Q15596 1464 aa-3.7□□□□□ -3
RNU6-340P-201ENST00000364005 SCTP09683 121 aa-3.7□□□□□ -3
RNU6-340P-201ENST00000364005 PSMG4Q5JS54 123 aa-3.7□□□□□ -3
RNU6-340P-201ENST00000364005 QSER1Q2KHR3 1735 aa-3.7□□□□□ -3
RNU6-340P-201ENST00000364005 NDUFC1O43677 76 aa-3.71□□□□□ -3
RNU6-340P-201ENST00000364005 SFTA2Q6UW10 78 aa-3.71□□□□□ -3
RNU6-340P-201ENST00000364005 HIGD1AQ9Y241 93 aa-3.71□□□□□ -3
RNU6-340P-201ENST00000364005 CDH23Q9H251 3354 aa-3.72□□□□□ -3
RNU6-340P-201ENST00000364005 PHLPP1O60346 1717 aa-3.72□□□□□ -3
RNU6-340P-201ENST00000364005 MRC2Q9UBG0 1479 aa-3.73□□□□□ -3.01
RNU6-340P-201ENST00000364005 UBR3Q6ZT12 1888 aa-3.73□□□□□ -3.01
RNU6-340P-201ENST00000364005 SHPRHQ149N8 1683 aa-3.73□□□□□ -3.01
RNU6-340P-201ENST00000364005 PLCH1Q4KWH8 1693 aa-3.73□□□□□ -3.01
RNU6-340P-201ENST00000364005 H3BUA1 57 aa-3.73□□□□□ -3.01
RNU6-340P-201ENST00000364005 CTXN2P0C2S0 81 aa-3.73□□□□□ -3.01
RNU6-340P-201ENST00000364005 SERP1Q9Y6X1 66 aa-3.73□□□□□ -3.01
RNU6-340P-201ENST00000364005 TRAV36DV7A0A075B6V5 113 aa-3.74□□□□□ -3.01
RNU6-340P-201ENST00000364005 HSD52Q0P140 79 aa-3.74□□□□□ -3.01
RNU6-340P-201ENST00000364005 BVES-AS1Q5T3Y7 98 aa-3.74□□□□□ -3.01
RNU6-340P-201ENST00000364005 C12orf73Q69YU5 71 aa-3.74□□□□□ -3.01
RNU6-340P-201ENST00000364005 MON2Q7Z3U7 1717 aa-3.74□□□□□ -3.01
RNU6-340P-201ENST00000364005 ARL11Q969Q4 196 aa-3.74□□□□□ -3.01
RNU6-340P-201ENST00000364005 MED14O60244 1454 aa-3.74□□□□□ -3.01
RNU6-340P-201ENST00000364005 ZFYVE16Q7Z3T8 1539 aa-3.75□□□□□ -3.01
RNU6-340P-201ENST00000364005 EIF4G3O43432 1585 aaKnown RBP-3.75□□□□□ -3.01
RNU6-340P-201ENST00000364005 SAMD9Q5K651 1589 aa-3.75□□□□□ -3.01
RNU6-340P-201ENST00000364005 TRAPPC2P0DI81 140 aa-3.75□□□□□ -3.01
RNU6-340P-201ENST00000364005 TRAPPC2BP0DI82 140 aa-3.75□□□□□ -3.01
RNU6-340P-201ENST00000364005 BRCA2P51587 3418 aa-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 IGLC6P0CF74 106 aa-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 RPS27P42677 84 aaKnown RBP-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 MRPS10P82664 201 aaKnown RBP-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 SAMD13Q5VXD3 122 aa-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 TOMM20LQ6UXN7 152 aa-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 RPS27LQ71UM5 84 aaKnown RBP-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 BOLA2Q9H3K6 86 aa-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 LINC00474Q9P2X8 69 aa-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 AP4S1Q9Y587 144 aa-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 SUPT6HQ7KZ85 1726 aaKnown RBP-3.76□□□□□ -3.01
RNU6-340P-201ENST00000364005 NRXN3Q9Y4C0 1643 aa-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 CPSF1Q10570 1443 aaKnown RBP-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 LRRC9Q6ZRR7 1453 aa-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 RPL38P63173 70 aaKnown RBP-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 RGS21Q2M5E4 152 aa-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 SMIM21Q3B7S5 101 aa-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 KCNRGQ8N5I3 272 aa-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 HOPXQ9BPY8 73 aaPredicted RBP-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 THOC2Q8NI27 1593 aaKnown RBP-3.77□□□□□ -3.01
RNU6-340P-201ENST00000364005 ROBO1Q9Y6N7 1651 aa-3.78□□□□□ -3.01
RNU6-340P-201ENST00000364005 SPHKAPQ2M3C7 1700 aa-3.78□□□□□ -3.01
RNU6-340P-201ENST00000364005 C7orf77A4D0Y5 90 aa-3.78□□□□□ -3.01
RNU6-340P-201ENST00000364005 COX6CP09669 75 aa-3.78□□□□□ -3.01
RNU6-340P-201ENST00000364005 GUCA1AP43080 201 aaPredicted RBP-3.78□□□□□ -3.01
RNU6-340P-201ENST00000364005 SPANXDQ9BXN6 97 aa-3.78□□□□□ -3.01
RNU6-340P-201ENST00000364005 ATPIF1Q9UII2 106 aa-3.78□□□□□ -3.01
RNU6-340P-201ENST00000364005 TOP2BQ02880 1626 aa-3.78□□□□□ -3.01
RNU6-340P-201ENST00000364005 C5P01031 1676 aa-3.78□□□□□ -3.02
RNU6-340P-201ENST00000364005 TOPAZ1Q8N9V7 1692 aa-3.78□□□□□ -3.02
RNU6-340P-201ENST00000364005 ITSN2Q9NZM3 1697 aa-3.8□□□□□ -3.02
RNU6-340P-201ENST00000364005 MRPS25P82663 173 aaKnown RBP-3.8□□□□□ -3.02
RNU6-340P-201ENST00000364005 Q56UQ5 140 aa-3.8□□□□□ -3.02
RNU6-340P-201ENST00000364005 ZNF436-AS1Q8NC38 126 aaPredicted RBP-3.8□□□□□ -3.02
RNU6-340P-201ENST00000364005 LSM10Q969L4 123 aaKnown RBP-3.8□□□□□ -3.02
RNU6-340P-201ENST00000364005 C12orf57Q99622 126 aa-3.8□□□□□ -3.02
RNU6-340P-201ENST00000364005 MANBALQ9NQG1 85 aa-3.8□□□□□ -3.02
RNU6-340P-201ENST00000364005 LINC00694P0DN24 101 aa-3.81□□□□□ -3.02
RNU6-340P-201ENST00000364005 OVOS2A0A0J9YW53 1432 aa-3.81□□□□□ -3.02
RNU6-340P-201ENST00000364005 OVOS2Q6IE36 1432 aa-3.81□□□□□ -3.02
RNU6-340P-201ENST00000364005 ZC3H13Q5T200 1668 aaKnown RBP-3.81□□□□□ -3.02
RNU6-340P-201ENST00000364005 TFAMQ00059 246 aaKnown RBP-3.82□□□□□ -3.02
RNU6-340P-201ENST00000364005 TCEAL4Q96EI5 215 aa-3.82□□□□□ -3.02
RNU6-340P-201ENST00000364005 KIF1AQ12756 1690 aa-3.82□□□□□ -3.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms