RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MRPL55Q7Z7F7 128 aaKnown RBP11.46□□□□□ -0.58
SMARCD3-202ENST00000356800 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
SMARCD3-202ENST00000356800 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
SMARCD3-202ENST00000356800 LINC00167Q96N53 147 aa11.45□□□□□ -0.58
SMARCD3-202ENST00000356800 C9JAW5 83 aa11.44□□□□□ -0.58
SMARCD3-202ENST00000356800 M0QXV9 152 aa11.44□□□□□ -0.58
SMARCD3-202ENST00000356800 MTURNQ8N3F0 131 aa11.44□□□□□ -0.58
SMARCD3-202ENST00000356800 IGLV1-50A0A075B6I6 118 aa11.43□□□□□ -0.58
SMARCD3-202ENST00000356800 A0A087WYN8 130 aa11.43□□□□□ -0.58
SMARCD3-202ENST00000356800 TRBV7-6A0A0J9YX20 115 aa11.43□□□□□ -0.58
SMARCD3-202ENST00000356800 A0A1B0GVY2 172 aa11.43□□□□□ -0.58
SMARCD3-202ENST00000356800 A0A1B0GX51 115 aa11.43□□□□□ -0.58
SMARCD3-202ENST00000356800 RPL37AP8A6NKH3 93 aa11.43□□□□□ -0.58
SMARCD3-202ENST00000356800 EPM2AB3EWF7 344 aa11.43□□□□□ -0.58
SMARCD3-202ENST00000356800 SLC25A20O43772 301 aa11.42□□□□□ -0.58
SMARCD3-202ENST00000356800 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
SMARCD3-202ENST00000356800 KRTAP10-1P60331 282 aa11.42□□□□□ -0.58
SMARCD3-202ENST00000356800 DPH3Q96FX2 82 aa11.42□□□□□ -0.58
SMARCD3-202ENST00000356800 LINC01600Q96MT4 127 aa11.42□□□□□ -0.58
SMARCD3-202ENST00000356800 PKHD1P08F94 4074 aa11.41□□□□□ -0.58
SMARCD3-202ENST00000356800 PHF5AQ7RTV0 110 aaKnown RBP11.4□□□□□ -0.58
SMARCD3-202ENST00000356800 FAM30AQ9NZY2 134 aa11.4□□□□□ -0.58
SMARCD3-202ENST00000356800 PRYO14603 147 aa11.39□□□□□ -0.59
SMARCD3-202ENST00000356800 ELOF1P60002 83 aaKnown RBP11.39□□□□□ -0.59
SMARCD3-202ENST00000356800 LINC00575Q6W349 94 aa11.39□□□□□ -0.59
SMARCD3-202ENST00000356800 H3BT86 120 aa11.38□□□□□ -0.59
SMARCD3-202ENST00000356800 ANKRD29Q8N6D5 301 aa11.38□□□□□ -0.59
SMARCD3-202ENST00000356800 PLAC8Q9NZF1 115 aa11.38□□□□□ -0.59
SMARCD3-202ENST00000356800 SNCGO76070 127 aa11.37□□□□□ -0.59
SMARCD3-202ENST00000356800 DNAL4O96015 105 aa11.37□□□□□ -0.59
SMARCD3-202ENST00000356800 COX7BP24311 80 aa11.37□□□□□ -0.59
SMARCD3-202ENST00000356800 SPRR1AP35321 89 aa11.37□□□□□ -0.59
SMARCD3-202ENST00000356800 Q6ZSA8 131 aa11.37□□□□□ -0.59
SMARCD3-202ENST00000356800 KRTAP11-1Q8IUC1 163 aa11.37□□□□□ -0.59
SMARCD3-202ENST00000356800 KRTAP4-16G5E9R7 235 aaPredicted RBP11.34□□□□□ -0.59
SMARCD3-202ENST00000356800 hADV29S1A0JD25 119 aa11.33□□□□□ -0.6
SMARCD3-202ENST00000356800 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
SMARCD3-202ENST00000356800 LINC00528Q8N1L1 170 aa11.33□□□□□ -0.6
SMARCD3-202ENST00000356800 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
SMARCD3-202ENST00000356800 LRP1BQ9NZR2 4599 aa11.32□□□□□ -0.6
SMARCD3-202ENST00000356800 BAALC-AS2P0C853 105 aa11.32□□□□□ -0.6
SMARCD3-202ENST00000356800 TEN1Q86WV5 123 aa11.32□□□□□ -0.6
SMARCD3-202ENST00000356800 UBE2BP63146 152 aa11.31□□□□□ -0.6
SMARCD3-202ENST00000356800 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
SMARCD3-202ENST00000356800 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
SMARCD3-202ENST00000356800 B5MCH6 92 aa11.3□□□□□ -0.6
SMARCD3-202ENST00000356800 INAFM2P0DMQ5 153 aa11.3□□□□□ -0.6
SMARCD3-202ENST00000356800 Q6ZRX8 168 aa11.3□□□□□ -0.6
SMARCD3-202ENST00000356800 ORMDL1Q9P0S3 153 aa11.3□□□□□ -0.6
SMARCD3-202ENST00000356800 ETDCA0A1B0GVM5 59 aa11.29□□□□□ -0.6
SMARCD3-202ENST00000356800 SCXQ7RTU7 201 aa11.29□□□□□ -0.6
SMARCD3-202ENST00000356800 HAMPP81172 84 aa11.28□□□□□ -0.6
SMARCD3-202ENST00000356800 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.27□□□□□ -0.61
SMARCD3-202ENST00000356800 DHRS4-AS1Q9P1J3 65 aa11.27□□□□□ -0.61
SMARCD3-202ENST00000356800 H3BQ85 93 aa11.24□□□□□ -0.61
SMARCD3-202ENST00000356800 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
SMARCD3-202ENST00000356800 OCIAD2Q56VL3 154 aa11.24□□□□□ -0.61
SMARCD3-202ENST00000356800 Q6ZQY7 126 aa11.24□□□□□ -0.61
SMARCD3-202ENST00000356800 PPDPFLQ8WWR9 84 aa11.24□□□□□ -0.61
SMARCD3-202ENST00000356800 Q9BRP9 147 aa11.24□□□□□ -0.61
SMARCD3-202ENST00000356800 GHRHP01286 108 aa11.22□□□□□ -0.61
SMARCD3-202ENST00000356800 TEX49A0A1B0GTD5 131 aa11.21□□□□□ -0.61
SMARCD3-202ENST00000356800 FAM19A1Q7Z5A9 133 aa11.2□□□□□ -0.62
SMARCD3-202ENST00000356800 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
SMARCD3-202ENST00000356800 H0Y9J4 135 aa11.2□□□□□ -0.62
SMARCD3-202ENST00000356800 K7ERU9 68 aa11.2□□□□□ -0.62
SMARCD3-202ENST00000356800 PRLHP81277 87 aa11.2□□□□□ -0.62
SMARCD3-202ENST00000356800 BCE1O60756 84 aa11.19□□□□□ -0.62
SMARCD3-202ENST00000356800 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
SMARCD3-202ENST00000356800 J3QR89 54 aa11.17□□□□□ -0.62
SMARCD3-202ENST00000356800 XGP55808 180 aa11.17□□□□□ -0.62
SMARCD3-202ENST00000356800 SMCR5Q8TEV8 140 aa11.17□□□□□ -0.62
SMARCD3-202ENST00000356800 OBSCN-AS1Q96MR7 158 aa11.17□□□□□ -0.62
SMARCD3-202ENST00000356800 KRTAP13-1Q8IUC0 172 aa11.16□□□□□ -0.62
SMARCD3-202ENST00000356800 ERC2-IT1O76042 136 aa11.15□□□□□ -0.62
SMARCD3-202ENST00000356800 C1orf137Q5JT78 98 aa11.14□□□□□ -0.63
SMARCD3-202ENST00000356800 JMJD7-PLA2G4BH0Y9G9 81 aa11.13□□□□□ -0.63
SMARCD3-202ENST00000356800 UBE2AP49459 152 aa11.13□□□□□ -0.63
SMARCD3-202ENST00000356800 LINC01547P58512 204 aaPredicted RBP11.12□□□□□ -0.63
SMARCD3-202ENST00000356800 SRRM2Q9UQ35 2752 aaKnown RBP11.11□□□□□ -0.63
SMARCD3-202ENST00000356800 IGLV5-48A0A075B6I7 105 aa11.11□□□□□ -0.63
SMARCD3-202ENST00000356800 HIGD2AQ9BW72 106 aa11.11□□□□□ -0.63
SMARCD3-202ENST00000356800 Q8N377 158 aa11.1□□□□□ -0.63
SMARCD3-202ENST00000356800 ST20-AS1Q8NBB2 130 aa11.1□□□□□ -0.63
SMARCD3-202ENST00000356800 LAMTOR3Q9UHA4 124 aa11.09□□□□□ -0.63
SMARCD3-202ENST00000356800 DEFB105AQ8NG35 78 aa11.08□□□□□ -0.64
SMARCD3-202ENST00000356800 VPS13BQ7Z7G8 4022 aa11.07□□□□□ -0.64
SMARCD3-202ENST00000356800 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
SMARCD3-202ENST00000356800 NDUFV3P56181 108 aaKnown RBP11.07□□□□□ -0.64
SMARCD3-202ENST00000356800 C14orf132Q9NPU4 83 aa11.06□□□□□ -0.64
SMARCD3-202ENST00000356800 EPPK1P58107 5090 aaKnown RBP11.05□□□□□ -0.64
SMARCD3-202ENST00000356800 RBM3P98179 157 aaKnown RBP11.05□□□□□ -0.64
SMARCD3-202ENST00000356800 ZNF861PO60384 105 aa11.04□□□□□ -0.64
SMARCD3-202ENST00000356800 A0A1B0GV72 72 aa11.03□□□□□ -0.64
SMARCD3-202ENST00000356800 SMR3BP02814 79 aaPredicted RBP11.03□□□□□ -0.64
SMARCD3-202ENST00000356800 FAM240AA0A1B0GVK7 77 aa11.02□□□□□ -0.64
SMARCD3-202ENST00000356800 LOC110117498A0A087WWA1 95 aa11.01□□□□□ -0.65
SMARCD3-202ENST00000356800 SPRR1BP22528 89 aa11□□□□□ -0.65
SMARCD3-202ENST00000356800 DSCR8Q96T75 97 aa11□□□□□ -0.65
SMARCD3-202ENST00000356800 PDE6GP18545 87 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms