RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 JOSD1Q15040 202 aaPredicted RBP6.06□□□□□ -1.44
CAPN3-204ENST00000356316 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
CAPN3-204ENST00000356316 LOC107984156A0A0G2JMH3 177 aa6.05□□□□□ -1.44
CAPN3-204ENST00000356316 SERF1AO75920 110 aa6.05□□□□□ -1.44
CAPN3-204ENST00000356316 FABP4P15090 132 aa6.05□□□□□ -1.44
CAPN3-204ENST00000356316 NMUP48645 174 aa6.05□□□□□ -1.44
CAPN3-204ENST00000356316 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
CAPN3-204ENST00000356316 ARL17AQ8IVW1 177 aa6.05□□□□□ -1.44
CAPN3-204ENST00000356316 SPANXB1Q9NS25 103 aaPredicted RBP6.05□□□□□ -1.44
CAPN3-204ENST00000356316 IGKCP01834 107 aa6.04□□□□□ -1.44
CAPN3-204ENST00000356316 TSPEAR-AS2P59090 65 aa6.04□□□□□ -1.44
CAPN3-204ENST00000356316 MOBPQ13875 183 aa6.04□□□□□ -1.44
CAPN3-204ENST00000356316 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
CAPN3-204ENST00000356316 NDUFC2O95298 119 aa6.03□□□□□ -1.44
CAPN3-204ENST00000356316 HINT1P49773 126 aaPredicted RBP6.03□□□□□ -1.44
CAPN3-204ENST00000356316 Q6ZRX8 168 aa6.03□□□□□ -1.44
CAPN3-204ENST00000356316 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
CAPN3-204ENST00000356316 FAT4Q6V0I7 4981 aa6.03□□□□□ -1.44
CAPN3-204ENST00000356316 SLC25A20O43772 301 aa6.02□□□□□ -1.45
CAPN3-204ENST00000356316 ERC2-IT1O76042 136 aa6.02□□□□□ -1.45
CAPN3-204ENST00000356316 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
CAPN3-204ENST00000356316 PMCHL2Q9BQD1 86 aa6.02□□□□□ -1.45
CAPN3-204ENST00000356316 Q9BRP9 147 aa6.02□□□□□ -1.45
CAPN3-204ENST00000356316 TRAV23DV6A0A075B6W5 121 aa6.01□□□□□ -1.45
CAPN3-204ENST00000356316 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
CAPN3-204ENST00000356316 IGLV6-57P01721 117 aa6.01□□□□□ -1.45
CAPN3-204ENST00000356316 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
CAPN3-204ENST00000356316 RPS29P62273 56 aaKnown RBP6.01□□□□□ -1.45
CAPN3-204ENST00000356316 C9orf153Q5TBE3 101 aa6.01□□□□□ -1.45
CAPN3-204ENST00000356316 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
CAPN3-204ENST00000356316 NPC2P61916 151 aa6□□□□□ -1.45
CAPN3-204ENST00000356316 MUC17Q685J3 4493 aa6□□□□□ -1.45
CAPN3-204ENST00000356316 ZNF73O43830 326 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-204ENST00000356316 ASB16-AS1Q495Z4 193 aa5.99□□□□□ -1.45
CAPN3-204ENST00000356316 Q8N377 158 aa5.99□□□□□ -1.45
CAPN3-204ENST00000356316 A0A0J9YXY3 114 aa5.98□□□□□ -1.45
CAPN3-204ENST00000356316 C5orf52A6NGY3 159 aa5.98□□□□□ -1.45
CAPN3-204ENST00000356316 LINC01547P58512 204 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-204ENST00000356316 ADAMTSL4-AS1Q5T5F5 129 aa5.98□□□□□ -1.45
CAPN3-204ENST00000356316 OR13C6PQ8NH95 151 aa5.98□□□□□ -1.45
CAPN3-204ENST00000356316 E9PLD3 99 aa5.97□□□□□ -1.45
CAPN3-204ENST00000356316 SLC25A34Q6PIV7 304 aa5.96□□□□□ -1.46
CAPN3-204ENST00000356316 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.46
CAPN3-204ENST00000356316 COLCA2A8K830 154 aa5.95□□□□□ -1.46
CAPN3-204ENST00000356316 ST20-AS1Q8NBB2 130 aa5.95□□□□□ -1.46
CAPN3-204ENST00000356316 SPANXCQ9NY87 97 aa5.95□□□□□ -1.46
CAPN3-204ENST00000356316 SYS1-DBNDD2H3BUS1 97 aa5.94□□□□□ -1.46
CAPN3-204ENST00000356316 LINC00308Q8TCZ7 52 aa5.94□□□□□ -1.46
CAPN3-204ENST00000356316 DHRS4-AS1Q9P1J3 65 aa5.94□□□□□ -1.46
CAPN3-204ENST00000356316 TIMM17BO60830 172 aa5.93□□□□□ -1.46
CAPN3-204ENST00000356316 SLC7A5P1Q8MH63 180 aa5.93□□□□□ -1.46
CAPN3-204ENST00000356316 LIMD2Q9BT23 127 aa5.93□□□□□ -1.46
CAPN3-204ENST00000356316 LAMTOR3Q9UHA4 124 aa5.93□□□□□ -1.46
CAPN3-204ENST00000356316 TAL2Q16559 108 aa5.92□□□□□ -1.46
CAPN3-204ENST00000356316 LINC00518Q8N0U6 118 aa5.92□□□□□ -1.46
CAPN3-204ENST00000356316 SPANXDQ9BXN6 97 aa5.92□□□□□ -1.46
CAPN3-204ENST00000356316 ZNF815PA8K554 130 aa5.91□□□□□ -1.46
CAPN3-204ENST00000356316 PET117Q6UWS5 81 aa5.91□□□□□ -1.46
CAPN3-204ENST00000356316 HRCT1Q6UXD1 115 aa5.91□□□□□ -1.46
CAPN3-204ENST00000356316 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
CAPN3-204ENST00000356316 COX7BP24311 80 aa5.9□□□□□ -1.46
CAPN3-204ENST00000356316 DEFB105AQ8NG35 78 aa5.9□□□□□ -1.46
CAPN3-204ENST00000356316 SPRR1BP22528 89 aa5.89□□□□□ -1.47
CAPN3-204ENST00000356316 C6orf99Q4VX62 202 aa5.89□□□□□ -1.47
CAPN3-204ENST00000356316 LINC01545Q5VT33 79 aa5.89□□□□□ -1.47
CAPN3-204ENST00000356316 COPS9Q8WXC6 57 aa5.89□□□□□ -1.47
CAPN3-204ENST00000356316 LITAFQ99732 161 aa5.89□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BKO60814 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BJP06899 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BOP23527 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BBP33778 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BDP58876 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BCP62807 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST2H2BEQ16778 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-204ENST00000356316 SCGB1D4Q6XE38 83 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BHQ93079 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BNQ99877 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 HIST1H2BMQ99879 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 PRO1933Q9H354 126 aa5.88□□□□□ -1.47
CAPN3-204ENST00000356316 TEX49A0A1B0GTD5 131 aa5.87□□□□□ -1.47
CAPN3-204ENST00000356316 ELOF1P60002 83 aaKnown RBP5.87□□□□□ -1.47
CAPN3-204ENST00000356316 Q1RN00 199 aa5.87□□□□□ -1.47
CAPN3-204ENST00000356316 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
CAPN3-204ENST00000356316 TRBV7-6A0A0J9YX20 115 aa5.86□□□□□ -1.47
CAPN3-204ENST00000356316 A6NDN8 102 aa5.86□□□□□ -1.47
CAPN3-204ENST00000356316 CD164Q04900 197 aa5.86□□□□□ -1.47
CAPN3-204ENST00000356316 C9orf92A6NGG3 77 aa5.85□□□□□ -1.47
CAPN3-204ENST00000356316 H7C2G1 150 aa5.85□□□□□ -1.47
CAPN3-204ENST00000356316 C3orf79P0CE67 100 aa5.85□□□□□ -1.47
CAPN3-204ENST00000356316 AKR1D1P51857 326 aa5.85□□□□□ -1.47
CAPN3-204ENST00000356316 KRTDAPP60985 99 aa5.85□□□□□ -1.47
CAPN3-204ENST00000356316 TTTY13Q9BZ97 58 aa5.85□□□□□ -1.47
CAPN3-204ENST00000356316 A0A1B0GWB2 263 aa5.84□□□□□ -1.47
CAPN3-204ENST00000356316 C20orf202A1L168 122 aa5.84□□□□□ -1.47
CAPN3-204ENST00000356316 IGLV8-61A0A075B6I0 122 aa5.83□□□□□ -1.48
CAPN3-204ENST00000356316 A4D1N5 150 aa5.83□□□□□ -1.48
CAPN3-204ENST00000356316 IFITM1P13164 125 aa5.83□□□□□ -1.48
CAPN3-204ENST00000356316 PCOTHQ58A44 107 aa5.83□□□□□ -1.48
CAPN3-204ENST00000356316 Q6ZVH6 145 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms