RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
NPAS3-202ENST00000356141 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
NPAS3-202ENST00000356141 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
NPAS3-202ENST00000356141 KMT2AQ03164 3969 aa11.56□□□□□ -0.56
NPAS3-202ENST00000356141 PSCAO43653 123 aa11.55□□□□□ -0.56
NPAS3-202ENST00000356141 BRK1Q8WUW1 75 aa11.53□□□□□ -0.56
NPAS3-202ENST00000356141 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
NPAS3-202ENST00000356141 NDUFC2-KCTD14E9PQ53 114 aa11.52□□□□□ -0.57
NPAS3-202ENST00000356141 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
NPAS3-202ENST00000356141 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
NPAS3-202ENST00000356141 A0A087WVE0 104 aa11.51□□□□□ -0.57
NPAS3-202ENST00000356141 IGKV3D-7A0A0C4DH55 119 aa11.51□□□□□ -0.57
NPAS3-202ENST00000356141 SERP2Q8N6R1 65 aa11.51□□□□□ -0.57
NPAS3-202ENST00000356141 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
NPAS3-202ENST00000356141 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
NPAS3-202ENST00000356141 GVQW2A0A096LPI5 108 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-202ENST00000356141 NDUFC2O95298 119 aa11.49□□□□□ -0.57
NPAS3-202ENST00000356141 CD164Q04900 197 aa11.49□□□□□ -0.57
NPAS3-202ENST00000356141 UPK3BQ9BT76 320 aa11.49□□□□□ -0.57
NPAS3-202ENST00000356141 PMAIP1Q13794 54 aa11.48□□□□□ -0.57
NPAS3-202ENST00000356141 C14orf132Q9NPU4 83 aa11.48□□□□□ -0.57
NPAS3-202ENST00000356141 SRRM2Q9UQ35 2752 aaKnown RBP11.48□□□□□ -0.57
NPAS3-202ENST00000356141 VPREB1P12018 145 aa11.47□□□□□ -0.57
NPAS3-202ENST00000356141 HIST1H4AP62805 103 aaKnown RBP11.47□□□□□ -0.57
NPAS3-202ENST00000356141 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
NPAS3-202ENST00000356141 H0YGX0 51 aa11.45□□□□□ -0.58
NPAS3-202ENST00000356141 DYNC2H1Q8NCM8 4307 aaKnown RBP11.44□□□□□ -0.58
NPAS3-202ENST00000356141 Q8N814 137 aa11.44□□□□□ -0.58
NPAS3-202ENST00000356141 IGLV6-57P01721 117 aa11.43□□□□□ -0.58
NPAS3-202ENST00000356141 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
NPAS3-202ENST00000356141 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
NPAS3-202ENST00000356141 CHTF8P0CG12 524 aa11.41□□□□□ -0.58
NPAS3-202ENST00000356141 Q6ZQY7 126 aa11.41□□□□□ -0.58
NPAS3-202ENST00000356141 RMI2Q96E14 147 aa11.41□□□□□ -0.58
NPAS3-202ENST00000356141 ORMDL1Q9P0S3 153 aa11.4□□□□□ -0.58
NPAS3-202ENST00000356141 PRR26Q8N8Z3 221 aa11.4□□□□□ -0.59
NPAS3-202ENST00000356141 C7orf33Q8WU49 177 aa11.39□□□□□ -0.59
NPAS3-202ENST00000356141 DIRC1Q969H9 104 aa11.39□□□□□ -0.59
NPAS3-202ENST00000356141 LINC00575Q6W349 94 aa11.38□□□□□ -0.59
NPAS3-202ENST00000356141 C20orf197Q8N268 126 aa11.37□□□□□ -0.59
NPAS3-202ENST00000356141 DNAH2Q9P225 4427 aa11.37□□□□□ -0.59
NPAS3-202ENST00000356141 KRTAP7-1Q8IUC3 87 aa11.37□□□□□ -0.59
NPAS3-202ENST00000356141 DEFB105AQ8NG35 78 aa11.37□□□□□ -0.59
NPAS3-202ENST00000356141 VPS13DQ5THJ4 4388 aa11.37□□□□□ -0.59
NPAS3-202ENST00000356141 M0R378 163 aa11.36□□□□□ -0.59
NPAS3-202ENST00000356141 NUPR2A6NF83 97 aa11.36□□□□□ -0.59
NPAS3-202ENST00000356141 FP248Q71RG6 208 aaPredicted RBP11.36□□□□□ -0.59
NPAS3-202ENST00000356141 A0A096LNI7 61 aa11.35□□□□□ -0.59
NPAS3-202ENST00000356141 KRTAP21-3Q3LHN1 58 aa11.35□□□□□ -0.59
NPAS3-202ENST00000356141 NBDYA0A0U1RRE5 68 aa11.34□□□□□ -0.59
NPAS3-202ENST00000356141 LAMTOR3Q9UHA4 124 aa11.34□□□□□ -0.59
NPAS3-202ENST00000356141 COX7BP24311 80 aa11.34□□□□□ -0.59
NPAS3-202ENST00000356141 SERP1Q9Y6X1 66 aa11.33□□□□□ -0.6
NPAS3-202ENST00000356141 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
NPAS3-202ENST00000356141 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
NPAS3-202ENST00000356141 GHRHP01286 108 aa11.31□□□□□ -0.6
NPAS3-202ENST00000356141 LINC00167Q96N53 147 aa11.31□□□□□ -0.6
NPAS3-202ENST00000356141 LINC00846Q9NV44 126 aa11.3□□□□□ -0.6
NPAS3-202ENST00000356141 LY6G6CO95867 125 aa11.29□□□□□ -0.6
NPAS3-202ENST00000356141 SMIM26A0A096LP01 95 aa11.29□□□□□ -0.6
NPAS3-202ENST00000356141 A0A1W2PNN7 141 aa11.29□□□□□ -0.6
NPAS3-202ENST00000356141 MUC7Q8TAX7 377 aa11.28□□□□□ -0.6
NPAS3-202ENST00000356141 EPM2AB3EWF7 344 aa11.27□□□□□ -0.6
NPAS3-202ENST00000356141 MRPL55Q7Z7F7 128 aaKnown RBP11.27□□□□□ -0.6
NPAS3-202ENST00000356141 HYDINQ4G0P3 5121 aa11.27□□□□□ -0.61
NPAS3-202ENST00000356141 ELOF1P60002 83 aaKnown RBP11.27□□□□□ -0.61
NPAS3-202ENST00000356141 PANO1I0J062 215 aa11.26□□□□□ -0.61
NPAS3-202ENST00000356141 Q6JHZ5 121 aa11.26□□□□□ -0.61
NPAS3-202ENST00000356141 TMEM256-PLSCR3K7ERE1 68 aa11.25□□□□□ -0.61
NPAS3-202ENST00000356141 ST20-AS1Q8NBB2 130 aa11.24□□□□□ -0.61
NPAS3-202ENST00000356141 PHF5AQ7RTV0 110 aaKnown RBP11.23□□□□□ -0.61
NPAS3-202ENST00000356141 LRCOL1A6NCL2 159 aa11.22□□□□□ -0.61
NPAS3-202ENST00000356141 TLX1NBP0CAT3 122 aa11.22□□□□□ -0.61
NPAS3-202ENST00000356141 PRLHP81277 87 aa11.22□□□□□ -0.61
NPAS3-202ENST00000356141 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
NPAS3-202ENST00000356141 LINC00528Q8N1L1 170 aa11.22□□□□□ -0.61
NPAS3-202ENST00000356141 KRTAP11-1Q8IUC1 163 aa11.22□□□□□ -0.61
NPAS3-202ENST00000356141 HECTD4Q9Y4D8 3996 aa11.22□□□□□ -0.61
NPAS3-202ENST00000356141 ETDCA0A1B0GVM5 59 aa11.21□□□□□ -0.61
NPAS3-202ENST00000356141 IGLV1-50A0A075B6I6 118 aa11.21□□□□□ -0.62
NPAS3-202ENST00000356141 ERC2-IT1O76042 136 aa11.21□□□□□ -0.62
NPAS3-202ENST00000356141 UBE2BP63146 152 aa11.21□□□□□ -0.62
NPAS3-202ENST00000356141 MPLKIPQ8TAP9 179 aa11.21□□□□□ -0.62
NPAS3-202ENST00000356141 H7BZZ5 65 aa11.2□□□□□ -0.62
NPAS3-202ENST00000356141 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
NPAS3-202ENST00000356141 SNURFQ9Y675 71 aa11.2□□□□□ -0.62
NPAS3-202ENST00000356141 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
NPAS3-202ENST00000356141 Q9BRP9 147 aa11.19□□□□□ -0.62
NPAS3-202ENST00000356141 FRAS1Q86XX4 4008 aa11.19□□□□□ -0.62
NPAS3-202ENST00000356141 KCNQ1DNQ9H478 68 aa11.18□□□□□ -0.62
NPAS3-202ENST00000356141 DNAH6Q9C0G6 4158 aa11.18□□□□□ -0.62
NPAS3-202ENST00000356141 A0A0G2JQZ4 141 aa11.17□□□□□ -0.62
NPAS3-202ENST00000356141 KMT2CQ8NEZ4 4911 aaKnown RBP11.17□□□□□ -0.62
NPAS3-202ENST00000356141 C16orf90A8MZG2 172 aa11.16□□□□□ -0.62
NPAS3-202ENST00000356141 HIGD2AQ9BW72 106 aa11.16□□□□□ -0.62
NPAS3-202ENST00000356141 OBSCN-AS1Q96MR7 158 aa11.15□□□□□ -0.62
NPAS3-202ENST00000356141 TRBV7-6A0A0J9YX20 115 aa11.15□□□□□ -0.62
NPAS3-202ENST00000356141 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
NPAS3-202ENST00000356141 F8WEM9 126 aa11.14□□□□□ -0.63
NPAS3-202ENST00000356141 CCKP06307 115 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms