RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 A0A087WTM6 91 aa10.97□□□□□ -0.65
VPS13B-201ENST00000355155 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.97□□□□□ -0.65
VPS13B-201ENST00000355155 FAM168BA1KXE4 195 aa10.96□□□□□ -0.66
VPS13B-201ENST00000355155 MRPL55Q7Z7F7 128 aaKnown RBP10.96□□□□□ -0.66
VPS13B-201ENST00000355155 LINC00476Q8WZB0 136 aa10.96□□□□□ -0.66
VPS13B-201ENST00000355155 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
VPS13B-201ENST00000355155 DNAH17Q9UFH2 4485 aa10.95□□□□□ -0.66
VPS13B-201ENST00000355155 FBN3Q75N90 2809 aa10.95□□□□□ -0.66
VPS13B-201ENST00000355155 LINC00474Q9P2X8 69 aa10.94□□□□□ -0.66
VPS13B-201ENST00000355155 GHRHP01286 108 aa10.93□□□□□ -0.66
VPS13B-201ENST00000355155 CDIP1Q9H305 208 aa10.93□□□□□ -0.66
VPS13B-201ENST00000355155 B5MCH6 92 aa10.91□□□□□ -0.66
VPS13B-201ENST00000355155 JMJD7-PLA2G4BH0Y9G9 81 aa10.91□□□□□ -0.66
VPS13B-201ENST00000355155 ACYP1P07311 99 aa10.91□□□□□ -0.66
VPS13B-201ENST00000355155 VPS25Q9BRG1 176 aa10.9□□□□□ -0.66
VPS13B-201ENST00000355155 A0A1W2PNN7 141 aa10.9□□□□□ -0.66
VPS13B-201ENST00000355155 M0R2N4 97 aa10.9□□□□□ -0.67
VPS13B-201ENST00000355155 C1orf134Q5TEV5 83 aa10.9□□□□□ -0.67
VPS13B-201ENST00000355155 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.89□□□□□ -0.67
VPS13B-201ENST00000355155 Q6ZRX8 168 aa10.89□□□□□ -0.67
VPS13B-201ENST00000355155 FAM19A5Q7Z5A7 132 aaPredicted RBP10.89□□□□□ -0.67
VPS13B-201ENST00000355155 DHRS4-AS1Q9P1J3 65 aa10.89□□□□□ -0.67
VPS13B-201ENST00000355155 KMT2AQ03164 3969 aa10.87□□□□□ -0.67
VPS13B-201ENST00000355155 Q6ZQY7 126 aa10.86□□□□□ -0.67
VPS13B-201ENST00000355155 SPACA4Q8TDM5 124 aa10.86□□□□□ -0.67
VPS13B-201ENST00000355155 C21orf62-AS1Q17RA5 79 aa10.85□□□□□ -0.67
VPS13B-201ENST00000355155 REG3GQ6UW15 175 aa10.85□□□□□ -0.67
VPS13B-201ENST00000355155 FRAS1Q86XX4 4008 aa10.85□□□□□ -0.67
VPS13B-201ENST00000355155 HECTD4Q9Y4D8 3996 aa10.84□□□□□ -0.67
VPS13B-201ENST00000355155 LOC110117498A0A087WWA1 95 aa10.83□□□□□ -0.68
VPS13B-201ENST00000355155 H0Y9J4 135 aa10.83□□□□□ -0.68
VPS13B-201ENST00000355155 LY6G6CO95867 125 aa10.83□□□□□ -0.68
VPS13B-201ENST00000355155 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
VPS13B-201ENST00000355155 Q9BRP9 147 aa10.82□□□□□ -0.68
VPS13B-201ENST00000355155 IGLV5-48A0A075B6I7 105 aa10.81□□□□□ -0.68
VPS13B-201ENST00000355155 LINC01547P58512 204 aaPredicted RBP10.81□□□□□ -0.68
VPS13B-201ENST00000355155 TENM2Q9NT68 2774 aa10.81□□□□□ -0.68
VPS13B-201ENST00000355155 IGKV2-24A0A0C4DH68 120 aa10.81□□□□□ -0.68
VPS13B-201ENST00000355155 ETDCA0A1B0GVM5 59 aa10.81□□□□□ -0.68
VPS13B-201ENST00000355155 RTL8CO15255 209 aa10.81□□□□□ -0.68
VPS13B-201ENST00000355155 CCKP06307 115 aa10.8□□□□□ -0.68
VPS13B-201ENST00000355155 CHTF8P0CG12 524 aa10.8□□□□□ -0.68
VPS13B-201ENST00000355155 SIGMAR1Q99720 223 aa10.8□□□□□ -0.68
VPS13B-201ENST00000355155 PDE6GP18545 87 aa10.79□□□□□ -0.68
VPS13B-201ENST00000355155 PANO1I0J062 215 aa10.77□□□□□ -0.68
VPS13B-201ENST00000355155 C14orf132Q9NPU4 83 aa10.77□□□□□ -0.68
VPS13B-201ENST00000355155 DNAH8Q96JB1 4490 aa10.76□□□□□ -0.69
VPS13B-201ENST00000355155 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
VPS13B-201ENST00000355155 RBM3P98179 157 aaKnown RBP10.76□□□□□ -0.69
VPS13B-201ENST00000355155 TRBV7-4A0A0J9YYF1 115 aa10.76□□□□□ -0.69
VPS13B-201ENST00000355155 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
VPS13B-201ENST00000355155 Q6ZQT0 140 aa10.76□□□□□ -0.69
VPS13B-201ENST00000355155 SMCR5Q8TEV8 140 aa10.76□□□□□ -0.69
VPS13B-201ENST00000355155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.76□□□□□ -0.69
VPS13B-201ENST00000355155 XGP55808 180 aa10.75□□□□□ -0.69
VPS13B-201ENST00000355155 PHF5AQ7RTV0 110 aaKnown RBP10.75□□□□□ -0.69
VPS13B-201ENST00000355155 DNAH11Q96DT5 4516 aa10.75□□□□□ -0.69
VPS13B-201ENST00000355155 Q8N377 158 aa10.75□□□□□ -0.69
VPS13B-201ENST00000355155 NDUFV3P56181 108 aaKnown RBP10.74□□□□□ -0.69
VPS13B-201ENST00000355155 KRTAP11-1Q8IUC1 163 aa10.74□□□□□ -0.69
VPS13B-201ENST00000355155 TNP2Q05952 138 aa10.73□□□□□ -0.69
VPS13B-201ENST00000355155 KRTAP13-1Q8IUC0 172 aa10.73□□□□□ -0.69
VPS13B-201ENST00000355155 IGLV5-52A0A0A0MRZ9 124 aa10.72□□□□□ -0.69
VPS13B-201ENST00000355155 LAMTOR3Q9UHA4 124 aa10.71□□□□□ -0.69
VPS13B-201ENST00000355155 Q6Q795 121 aa10.71□□□□□ -0.7
VPS13B-201ENST00000355155 GAGE2AQ6NT46 116 aa10.7□□□□□ -0.7
VPS13B-201ENST00000355155 LINC00643Q86TS7 51 aa10.7□□□□□ -0.7
VPS13B-201ENST00000355155 BCE1O60756 84 aa10.69□□□□□ -0.7
VPS13B-201ENST00000355155 SPRR1BP22528 89 aa10.69□□□□□ -0.7
VPS13B-201ENST00000355155 ERC2-IT1O76042 136 aa10.69□□□□□ -0.7
VPS13B-201ENST00000355155 MT-ATP8P03928 68 aa10.69□□□□□ -0.7
VPS13B-201ENST00000355155 DSCR8Q96T75 97 aa10.68□□□□□ -0.7
VPS13B-201ENST00000355155 FAT2Q9NYQ8 4349 aa10.68□□□□□ -0.7
VPS13B-201ENST00000355155 TRBV7-7A0A0K0K1E9 115 aa10.67□□□□□ -0.7
VPS13B-201ENST00000355155 UBE2BP63146 152 aa10.67□□□□□ -0.7
VPS13B-201ENST00000355155 FAM19A1Q7Z5A9 133 aa10.67□□□□□ -0.7
VPS13B-201ENST00000355155 A0A1B0GW54 56 aa10.66□□□□□ -0.7
VPS13B-201ENST00000355155 IMUPQ9GZP8 106 aa10.65□□□□□ -0.7
VPS13B-201ENST00000355155 PKD1P98161 4303 aa10.65□□□□□ -0.7
VPS13B-201ENST00000355155 DNAH5Q8TE73 4624 aa10.65□□□□□ -0.7
VPS13B-201ENST00000355155 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.71
VPS13B-201ENST00000355155 Q6ZSA8 131 aa10.65□□□□□ -0.71
VPS13B-201ENST00000355155 SMIM29Q86T20 159 aa10.65□□□□□ -0.71
VPS13B-201ENST00000355155 LINC00846Q9NV44 126 aa10.65□□□□□ -0.71
VPS13B-201ENST00000355155 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
VPS13B-201ENST00000355155 LCE6AA0A183 80 aa10.63□□□□□ -0.71
VPS13B-201ENST00000355155 Q6JHZ5 121 aa10.62□□□□□ -0.71
VPS13B-201ENST00000355155 SACSQ9NZJ4 4579 aa10.61□□□□□ -0.71
VPS13B-201ENST00000355155 HYDINQ4G0P3 5121 aa10.61□□□□□ -0.71
VPS13B-201ENST00000355155 PRLHP81277 87 aa10.61□□□□□ -0.71
VPS13B-201ENST00000355155 KRTAP10-2P60368 255 aa10.61□□□□□ -0.71
VPS13B-201ENST00000355155 ATP5EP2Q5VTU8 51 aa10.58□□□□□ -0.72
VPS13B-201ENST00000355155 FUSP35637 526 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS13B-201ENST00000355155 DEFB105AQ8NG35 78 aa10.57□□□□□ -0.72
VPS13B-201ENST00000355155 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
VPS13B-201ENST00000355155 UBE2AP49459 152 aa10.56□□□□□ -0.72
VPS13B-201ENST00000355155 A0A1B0GV72 72 aa10.55□□□□□ -0.72
VPS13B-201ENST00000355155 DPH3Q96FX2 82 aa10.55□□□□□ -0.72
VPS13B-201ENST00000355155 LINC00483Q53H64 154 aa10.55□□□□□ -0.72
VPS13B-201ENST00000355155 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms