RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 FRAS1Q86XX4 4008 aa13.04□□□□□ -0.32
TRIM4-202ENST00000354241 SLC25A20O43772 301 aa13.03□□□□□ -0.32
TRIM4-202ENST00000354241 IGLV1-50A0A075B6I6 118 aa13.02□□□□□ -0.32
TRIM4-202ENST00000354241 PANO1I0J062 215 aa13.02□□□□□ -0.32
TRIM4-202ENST00000354241 KCNQ1DNQ9H478 68 aa13.02□□□□□ -0.32
TRIM4-202ENST00000354241 DPH3Q96FX2 82 aa13.01□□□□□ -0.33
TRIM4-202ENST00000354241 DNAL4O96015 105 aa13□□□□□ -0.33
TRIM4-202ENST00000354241 COX7BP24311 80 aa13□□□□□ -0.33
TRIM4-202ENST00000354241 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
TRIM4-202ENST00000354241 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
TRIM4-202ENST00000354241 SCGB1A1P11684 91 aa12.99□□□□□ -0.33
TRIM4-202ENST00000354241 SPACA4Q8TDM5 124 aa12.99□□□□□ -0.33
TRIM4-202ENST00000354241 SIGMAR1Q99720 223 aa12.99□□□□□ -0.33
TRIM4-202ENST00000354241 HECTD4Q9Y4D8 3996 aa12.99□□□□□ -0.33
TRIM4-202ENST00000354241 PRYO14603 147 aa12.98□□□□□ -0.33
TRIM4-202ENST00000354241 LINC00575Q6W349 94 aa12.98□□□□□ -0.33
TRIM4-202ENST00000354241 ELOF1P60002 83 aaKnown RBP12.98□□□□□ -0.33
TRIM4-202ENST00000354241 ANKRD29Q8N6D5 301 aa12.98□□□□□ -0.33
TRIM4-202ENST00000354241 TRBV7-6A0A0J9YX20 115 aa12.97□□□□□ -0.33
TRIM4-202ENST00000354241 KRTAP10-2P60368 255 aa12.97□□□□□ -0.33
TRIM4-202ENST00000354241 PHF5AQ7RTV0 110 aaKnown RBP12.97□□□□□ -0.33
TRIM4-202ENST00000354241 A0A1B0GX51 115 aa12.96□□□□□ -0.33
TRIM4-202ENST00000354241 H3BT86 120 aa12.96□□□□□ -0.34
TRIM4-202ENST00000354241 SNCGO76070 127 aa12.96□□□□□ -0.34
TRIM4-202ENST00000354241 hADV29S1A0JD25 119 aa12.94□□□□□ -0.34
TRIM4-202ENST00000354241 TEN1Q86WV5 123 aa12.94□□□□□ -0.34
TRIM4-202ENST00000354241 BAALC-AS2P0C853 105 aa12.93□□□□□ -0.34
TRIM4-202ENST00000354241 UBE2BP63146 152 aa12.93□□□□□ -0.34
TRIM4-202ENST00000354241 REG3GQ6UW15 175 aa12.92□□□□□ -0.34
TRIM4-202ENST00000354241 LINC00528Q8N1L1 170 aa12.92□□□□□ -0.34
TRIM4-202ENST00000354241 PPDPFLQ8WWR9 84 aa12.92□□□□□ -0.34
TRIM4-202ENST00000354241 ETDCA0A1B0GVM5 59 aa12.91□□□□□ -0.34
TRIM4-202ENST00000354241 SPRR1AP35321 89 aa12.91□□□□□ -0.34
TRIM4-202ENST00000354241 LINC01600Q96MT4 127 aa12.9□□□□□ -0.34
TRIM4-202ENST00000354241 ORMDL1Q9P0S3 153 aa12.9□□□□□ -0.35
TRIM4-202ENST00000354241 KRTAP4-16G5E9R7 235 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-202ENST00000354241 FAT2Q9NYQ8 4349 aa12.89□□□□□ -0.35
TRIM4-202ENST00000354241 DNAH11Q96DT5 4516 aa12.88□□□□□ -0.35
TRIM4-202ENST00000354241 B5MCH6 92 aa12.88□□□□□ -0.35
TRIM4-202ENST00000354241 KRTAP11-1Q8IUC1 163 aa12.87□□□□□ -0.35
TRIM4-202ENST00000354241 Q6ZRX8 168 aa12.86□□□□□ -0.35
TRIM4-202ENST00000354241 EPM2AB3EWF7 344 aa12.86□□□□□ -0.35
TRIM4-202ENST00000354241 Q6ZQY7 126 aa12.85□□□□□ -0.35
TRIM4-202ENST00000354241 CDIP1Q9H305 208 aa12.84□□□□□ -0.35
TRIM4-202ENST00000354241 PLAC8Q9NZF1 115 aa12.84□□□□□ -0.35
TRIM4-202ENST00000354241 LINC00336Q6ZUF6 198 aa12.84□□□□□ -0.35
TRIM4-202ENST00000354241 DNAH5Q8TE73 4624 aa12.83□□□□□ -0.36
TRIM4-202ENST00000354241 INAFM2P0DMQ5 153 aa12.82□□□□□ -0.36
TRIM4-202ENST00000354241 FAM19A1Q7Z5A9 133 aa12.82□□□□□ -0.36
TRIM4-202ENST00000354241 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.82□□□□□ -0.36
TRIM4-202ENST00000354241 DHRS4-AS1Q9P1J3 65 aa12.82□□□□□ -0.36
TRIM4-202ENST00000354241 TEX49A0A1B0GTD5 131 aa12.81□□□□□ -0.36
TRIM4-202ENST00000354241 Q9BRP9 147 aa12.81□□□□□ -0.36
TRIM4-202ENST00000354241 PKD1P98161 4303 aa12.8□□□□□ -0.36
TRIM4-202ENST00000354241 TMEM256-PLSCR3K7ERE1 68 aa12.8□□□□□ -0.36
TRIM4-202ENST00000354241 KRTAP10-1P60331 282 aa12.8□□□□□ -0.36
TRIM4-202ENST00000354241 FAM30AQ9NZY2 134 aa12.8□□□□□ -0.36
TRIM4-202ENST00000354241 PRLHP81277 87 aa12.78□□□□□ -0.36
TRIM4-202ENST00000354241 RYR2Q92736 4967 aa12.76□□□□□ -0.37
TRIM4-202ENST00000354241 A0A1B0GV72 72 aa12.74□□□□□ -0.37
TRIM4-202ENST00000354241 H3BQ85 93 aa12.74□□□□□ -0.37
TRIM4-202ENST00000354241 SMCR5Q8TEV8 140 aa12.74□□□□□ -0.37
TRIM4-202ENST00000354241 BCE1O60756 84 aa12.73□□□□□ -0.37
TRIM4-202ENST00000354241 ERC2-IT1O76042 136 aa12.73□□□□□ -0.37
TRIM4-202ENST00000354241 GHRHP01286 108 aa12.73□□□□□ -0.37
TRIM4-202ENST00000354241 UBE2AP49459 152 aa12.73□□□□□ -0.37
TRIM4-202ENST00000354241 CIRBP-AS1Q8TBR5 109 aa12.73□□□□□ -0.37
TRIM4-202ENST00000354241 Q6ZSA8 131 aa12.72□□□□□ -0.37
TRIM4-202ENST00000354241 DEFB105AQ8NG35 78 aa12.72□□□□□ -0.37
TRIM4-202ENST00000354241 HIGD2AQ9BW72 106 aa12.72□□□□□ -0.37
TRIM4-202ENST00000354241 KMT2CQ8NEZ4 4911 aaKnown RBP12.71□□□□□ -0.37
TRIM4-202ENST00000354241 DNAH8Q96JB1 4490 aa12.71□□□□□ -0.37
TRIM4-202ENST00000354241 XGP55808 180 aa12.71□□□□□ -0.37
TRIM4-202ENST00000354241 SCXQ7RTU7 201 aa12.71□□□□□ -0.37
TRIM4-202ENST00000354241 ST20-AS1Q8NBB2 130 aa12.7□□□□□ -0.38
TRIM4-202ENST00000354241 LAMTOR3Q9UHA4 124 aa12.7□□□□□ -0.38
TRIM4-202ENST00000354241 MT-ATP8P03928 68 aa12.7□□□□□ -0.38
TRIM4-202ENST00000354241 HAMPP81172 84 aa12.7□□□□□ -0.38
TRIM4-202ENST00000354241 A0A1B0GVY2 172 aa12.69□□□□□ -0.38
TRIM4-202ENST00000354241 H0Y9J4 135 aa12.69□□□□□ -0.38
TRIM4-202ENST00000354241 PSORS1C2Q9UIG4 136 aa12.69□□□□□ -0.38
TRIM4-202ENST00000354241 OBSCN-AS1Q96MR7 158 aa12.67□□□□□ -0.38
TRIM4-202ENST00000354241 JMJD7-PLA2G4BH0Y9G9 81 aa12.66□□□□□ -0.38
TRIM4-202ENST00000354241 C14orf132Q9NPU4 83 aa12.66□□□□□ -0.38
TRIM4-202ENST00000354241 LINC01547P58512 204 aaPredicted RBP12.66□□□□□ -0.38
TRIM4-202ENST00000354241 Q8N377 158 aa12.66□□□□□ -0.38
TRIM4-202ENST00000354241 C1orf137Q5JT78 98 aa12.65□□□□□ -0.38
TRIM4-202ENST00000354241 KRTAP13-1Q8IUC0 172 aa12.64□□□□□ -0.39
TRIM4-202ENST00000354241 NDUFV3P56181 108 aaKnown RBP12.63□□□□□ -0.39
TRIM4-202ENST00000354241 IGLV5-48A0A075B6I7 105 aa12.62□□□□□ -0.39
TRIM4-202ENST00000354241 RBM3P98179 157 aaKnown RBP12.6□□□□□ -0.39
TRIM4-202ENST00000354241 C3orf22Q8N5N4 141 aa12.59□□□□□ -0.39
TRIM4-202ENST00000354241 FAM240AA0A1B0GVK7 77 aa12.58□□□□□ -0.39
TRIM4-202ENST00000354241 GAGE2AQ6NT46 116 aa12.57□□□□□ -0.4
TRIM4-202ENST00000354241 PKHD1P08F94 4074 aa12.57□□□□□ -0.4
TRIM4-202ENST00000354241 DSCR8Q96T75 97 aa12.55□□□□□ -0.4
TRIM4-202ENST00000354241 Q6Q795 121 aa12.54□□□□□ -0.4
TRIM4-202ENST00000354241 ZNF861PO60384 105 aa12.54□□□□□ -0.4
TRIM4-202ENST00000354241 IGLV7-43P04211 117 aa12.54□□□□□ -0.4
TRIM4-202ENST00000354241 LRP1BQ9NZR2 4599 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms