RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PRKDCP78527 4128 aaKnown RBP13.13□□□□□ -0.31
CHRNA3-202ENST00000348639 DYNC2H1Q8NCM8 4307 aaKnown RBP13.12□□□□□ -0.31
CHRNA3-202ENST00000348639 MEGF8Q7Z7M0 2845 aa13.12□□□□□ -0.31
CHRNA3-202ENST00000348639 NDUFV3P56181 108 aaKnown RBP13.12□□□□□ -0.31
CHRNA3-202ENST00000348639 KRTAP7-1Q8IUC3 87 aa13.11□□□□□ -0.31
CHRNA3-202ENST00000348639 LOC110117498A0A087WWA1 95 aa13.1□□□□□ -0.31
CHRNA3-202ENST00000348639 DNAH10Q8IVF4 4471 aa13.1□□□□□ -0.31
CHRNA3-202ENST00000348639 CNBPP62633 177 aaKnown RBP13.1□□□□□ -0.31
CHRNA3-202ENST00000348639 Q6ZQT0 140 aa13.1□□□□□ -0.31
CHRNA3-202ENST00000348639 ANAPC13Q9BS18 74 aa13.1□□□□□ -0.31
CHRNA3-202ENST00000348639 IGLV1-50A0A075B6I6 118 aa13.09□□□□□ -0.31
CHRNA3-202ENST00000348639 PRYO14603 147 aa13.08□□□□□ -0.32
CHRNA3-202ENST00000348639 RPL37AP8A6NKH3 93 aa13.07□□□□□ -0.32
CHRNA3-202ENST00000348639 DSCR8Q96T75 97 aa13.06□□□□□ -0.32
CHRNA3-202ENST00000348639 PLECQ15149 4684 aaKnown RBP13.06□□□□□ -0.32
CHRNA3-202ENST00000348639 Q6JHZ5 121 aa13.06□□□□□ -0.32
CHRNA3-202ENST00000348639 MRPL55Q7Z7F7 128 aaKnown RBP13.06□□□□□ -0.32
CHRNA3-202ENST00000348639 PDE6GP18545 87 aa13.05□□□□□ -0.32
CHRNA3-202ENST00000348639 SPRR1AP35321 89 aa13.05□□□□□ -0.32
CHRNA3-202ENST00000348639 C14orf177Q52M58 125 aa13.05□□□□□ -0.32
CHRNA3-202ENST00000348639 FAM19A5Q7Z5A7 132 aaPredicted RBP13.05□□□□□ -0.32
CHRNA3-202ENST00000348639 KRTAP4-16G5E9R7 235 aaPredicted RBP13.05□□□□□ -0.32
CHRNA3-202ENST00000348639 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.03□□□□□ -0.32
CHRNA3-202ENST00000348639 NBDYA0A0U1RRE5 68 aa13.03□□□□□ -0.32
CHRNA3-202ENST00000348639 C16orf90A8MZG2 172 aa13.03□□□□□ -0.32
CHRNA3-202ENST00000348639 Q6ZRX8 168 aa13.03□□□□□ -0.32
CHRNA3-202ENST00000348639 B5MCH6 92 aa13.02□□□□□ -0.33
CHRNA3-202ENST00000348639 DHRS4-AS1Q9P1J3 65 aa13.01□□□□□ -0.33
CHRNA3-202ENST00000348639 A0A096LNI7 61 aa13□□□□□ -0.33
CHRNA3-202ENST00000348639 TRBV7-4A0A0J9YYF1 115 aa13□□□□□ -0.33
CHRNA3-202ENST00000348639 STARD9Q9P2P6 4700 aa13□□□□□ -0.33
CHRNA3-202ENST00000348639 ETDCA0A1B0GVM5 59 aa13□□□□□ -0.33
CHRNA3-202ENST00000348639 IGKV3D-7A0A0C4DH55 119 aa12.99□□□□□ -0.33
CHRNA3-202ENST00000348639 FAM236AA0A1B0GUQ0 79 aa12.99□□□□□ -0.33
CHRNA3-202ENST00000348639 FAM236BA0A1B0GV22 79 aa12.99□□□□□ -0.33
CHRNA3-202ENST00000348639 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
CHRNA3-202ENST00000348639 UBL5Q9BZL1 73 aa12.98□□□□□ -0.33
CHRNA3-202ENST00000348639 M0R2N4 97 aa12.97□□□□□ -0.33
CHRNA3-202ENST00000348639 Q9BRP9 147 aa12.97□□□□□ -0.33
CHRNA3-202ENST00000348639 LRCOL1A6NCL2 159 aa12.96□□□□□ -0.33
CHRNA3-202ENST00000348639 ATP5EP2Q5VTU8 51 aa12.95□□□□□ -0.34
CHRNA3-202ENST00000348639 REG3GQ6UW15 175 aa12.94□□□□□ -0.34
CHRNA3-202ENST00000348639 Q6ZRN7 208 aaPredicted RBP12.94□□□□□ -0.34
CHRNA3-202ENST00000348639 Q8N377 158 aa12.94□□□□□ -0.34
CHRNA3-202ENST00000348639 A0A1W2PNN7 141 aa12.93□□□□□ -0.34
CHRNA3-202ENST00000348639 LINC01547P58512 204 aaPredicted RBP12.93□□□□□ -0.34
CHRNA3-202ENST00000348639 DEFB105AQ8NG35 78 aa12.93□□□□□ -0.34
CHRNA3-202ENST00000348639 FBN3Q75N90 2809 aa12.91□□□□□ -0.34
CHRNA3-202ENST00000348639 C9orf163Q8N9P6 203 aa12.91□□□□□ -0.34
CHRNA3-202ENST00000348639 HIST1H4AP62805 103 aaKnown RBP12.89□□□□□ -0.35
CHRNA3-202ENST00000348639 PKIGQ9Y2B9 76 aa12.89□□□□□ -0.35
CHRNA3-202ENST00000348639 IGLV5-48A0A075B6I7 105 aa12.88□□□□□ -0.35
CHRNA3-202ENST00000348639 UBE2BP63146 152 aa12.87□□□□□ -0.35
CHRNA3-202ENST00000348639 Q6ZVQ6 151 aa12.87□□□□□ -0.35
CHRNA3-202ENST00000348639 CHTF8P0CG12 524 aa12.86□□□□□ -0.35
CHRNA3-202ENST00000348639 ERC2-IT1O76042 136 aa12.86□□□□□ -0.35
CHRNA3-202ENST00000348639 ST20-AS1Q8NBB2 130 aa12.85□□□□□ -0.35
CHRNA3-202ENST00000348639 A0A087WVE0 104 aa12.84□□□□□ -0.35
CHRNA3-202ENST00000348639 CCDC179H3BU77 68 aa12.83□□□□□ -0.36
CHRNA3-202ENST00000348639 VPS13DQ5THJ4 4388 aa12.83□□□□□ -0.36
CHRNA3-202ENST00000348639 C3orf22Q8N5N4 141 aa12.81□□□□□ -0.36
CHRNA3-202ENST00000348639 LINC00474Q9P2X8 69 aa12.81□□□□□ -0.36
CHRNA3-202ENST00000348639 ATOX1O00244 68 aa12.8□□□□□ -0.36
CHRNA3-202ENST00000348639 TNP2Q05952 138 aa12.8□□□□□ -0.36
CHRNA3-202ENST00000348639 FAM19A1Q7Z5A9 133 aa12.8□□□□□ -0.36
CHRNA3-202ENST00000348639 HAMPP81172 84 aa12.79□□□□□ -0.36
CHRNA3-202ENST00000348639 PHF5AQ7RTV0 110 aaKnown RBP12.79□□□□□ -0.36
CHRNA3-202ENST00000348639 KMT2AQ03164 3969 aa12.79□□□□□ -0.36
CHRNA3-202ENST00000348639 CXCL6P80162 114 aa12.78□□□□□ -0.36
CHRNA3-202ENST00000348639 PRLHP81277 87 aa12.76□□□□□ -0.37
CHRNA3-202ENST00000348639 Q6ZR54 194 aa12.76□□□□□ -0.37
CHRNA3-202ENST00000348639 A0A087WTM6 91 aa12.76□□□□□ -0.37
CHRNA3-202ENST00000348639 KRTAP11-1Q8IUC1 163 aa12.76□□□□□ -0.37
CHRNA3-202ENST00000348639 TGP01266 2768 aa12.75□□□□□ -0.37
CHRNA3-202ENST00000348639 DPH3Q96FX2 82 aa12.75□□□□□ -0.37
CHRNA3-202ENST00000348639 FUSP35637 526 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHRNA3-202ENST00000348639 LY6G6CO95867 125 aa12.73□□□□□ -0.37
CHRNA3-202ENST00000348639 C1orf137Q5JT78 98 aa12.73□□□□□ -0.37
CHRNA3-202ENST00000348639 A0A1B0GW54 56 aa12.72□□□□□ -0.37
CHRNA3-202ENST00000348639 PANO1I0J062 215 aa12.72□□□□□ -0.37
CHRNA3-202ENST00000348639 SMIM29Q86T20 159 aa12.72□□□□□ -0.37
CHRNA3-202ENST00000348639 H0Y9J4 135 aa12.72□□□□□ -0.37
CHRNA3-202ENST00000348639 HIGD2AQ9BW72 106 aa12.71□□□□□ -0.37
CHRNA3-202ENST00000348639 UQCRQO14949 82 aa12.71□□□□□ -0.38
CHRNA3-202ENST00000348639 A0A1W2PNM2 257 aa12.69□□□□□ -0.38
CHRNA3-202ENST00000348639 COX7CP15954 63 aa12.69□□□□□ -0.38
CHRNA3-202ENST00000348639 C3orf84H3BNL1 204 aa12.69□□□□□ -0.38
CHRNA3-202ENST00000348639 NREPQ16612 68 aa12.69□□□□□ -0.38
CHRNA3-202ENST00000348639 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
CHRNA3-202ENST00000348639 EPM2AB3EWF7 344 aa12.68□□□□□ -0.38
CHRNA3-202ENST00000348639 Q8NBF4 154 aa12.67□□□□□ -0.38
CHRNA3-202ENST00000348639 C1orf134Q5TEV5 83 aa12.67□□□□□ -0.38
CHRNA3-202ENST00000348639 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.67□□□□□ -0.38
CHRNA3-202ENST00000348639 F8WEM9 126 aa12.66□□□□□ -0.38
CHRNA3-202ENST00000348639 SCXQ7RTU7 201 aa12.66□□□□□ -0.38
CHRNA3-202ENST00000348639 RTL8CO15255 209 aa12.65□□□□□ -0.38
CHRNA3-202ENST00000348639 SERP2Q8N6R1 65 aa12.65□□□□□ -0.38
CHRNA3-202ENST00000348639 SPRR4Q96PI1 79 aa12.65□□□□□ -0.38
CHRNA3-202ENST00000348639 DNAH2Q9P225 4427 aa12.64□□□□□ -0.39
CHRNA3-202ENST00000348639 LINC00476Q8WZB0 136 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms