RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
CDK5RAP1-202ENST00000346416 IGLV5-37A0A075B6J1 123 aa9.08□□□□□ -0.96
CDK5RAP1-202ENST00000346416 CNBPP62633 177 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP1-202ENST00000346416 LINC00528Q8N1L1 170 aa9.08□□□□□ -0.96
CDK5RAP1-202ENST00000346416 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP1-202ENST00000346416 RPL37AP8A6NKH3 93 aa9.07□□□□□ -0.96
CDK5RAP1-202ENST00000346416 FAM19A5Q7Z5A7 132 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP1-202ENST00000346416 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP1-202ENST00000346416 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
CDK5RAP1-202ENST00000346416 IGLV1-50A0A075B6I6 118 aa9.05□□□□□ -0.96
CDK5RAP1-202ENST00000346416 CCKP06307 115 aa9.05□□□□□ -0.96
CDK5RAP1-202ENST00000346416 LAMTOR3Q9UHA4 124 aa9.05□□□□□ -0.96
CDK5RAP1-202ENST00000346416 H3BQ85 93 aa9.04□□□□□ -0.96
CDK5RAP1-202ENST00000346416 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP1-202ENST00000346416 A0A096LNI7 61 aa9.04□□□□□ -0.96
CDK5RAP1-202ENST00000346416 C16orf90A8MZG2 172 aa9.03□□□□□ -0.96
CDK5RAP1-202ENST00000346416 RBM3P98179 157 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP1-202ENST00000346416 VPS13DQ5THJ4 4388 aa9.03□□□□□ -0.96
CDK5RAP1-202ENST00000346416 IGKV2-24A0A0C4DH68 120 aa9.02□□□□□ -0.96
CDK5RAP1-202ENST00000346416 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.96
CDK5RAP1-202ENST00000346416 Q6ZRN7 208 aaPredicted RBP9.02□□□□□ -0.96
CDK5RAP1-202ENST00000346416 FAM236AA0A1B0GUQ0 79 aa9.02□□□□□ -0.97
CDK5RAP1-202ENST00000346416 FAM236BA0A1B0GV22 79 aa9.02□□□□□ -0.97
CDK5RAP1-202ENST00000346416 PRYO14603 147 aa9.02□□□□□ -0.97
CDK5RAP1-202ENST00000346416 GHRHP01286 108 aa9.02□□□□□ -0.97
CDK5RAP1-202ENST00000346416 LINC00846Q9NV44 126 aa9.02□□□□□ -0.97
CDK5RAP1-202ENST00000346416 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
CDK5RAP1-202ENST00000346416 M0R2N4 97 aa9.01□□□□□ -0.97
CDK5RAP1-202ENST00000346416 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
CDK5RAP1-202ENST00000346416 SPRR1AP35321 89 aa9.01□□□□□ -0.97
CDK5RAP1-202ENST00000346416 Q6JHZ5 121 aa9□□□□□ -0.97
CDK5RAP1-202ENST00000346416 Q6ZRX8 168 aa8.99□□□□□ -0.97
CDK5RAP1-202ENST00000346416 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
CDK5RAP1-202ENST00000346416 B5MCH6 92 aa8.99□□□□□ -0.97
CDK5RAP1-202ENST00000346416 Q6ZQT0 140 aa8.98□□□□□ -0.97
CDK5RAP1-202ENST00000346416 LOC110117498A0A087WWA1 95 aa8.98□□□□□ -0.97
CDK5RAP1-202ENST00000346416 A0A1W2PNN7 141 aa8.98□□□□□ -0.97
CDK5RAP1-202ENST00000346416 C9orf163Q8N9P6 203 aa8.97□□□□□ -0.97
CDK5RAP1-202ENST00000346416 DSCR8Q96T75 97 aa8.97□□□□□ -0.97
CDK5RAP1-202ENST00000346416 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
CDK5RAP1-202ENST00000346416 TGP01266 2768 aa8.97□□□□□ -0.97
CDK5RAP1-202ENST00000346416 Q9BRP9 147 aa8.96□□□□□ -0.97
CDK5RAP1-202ENST00000346416 CCDC179H3BU77 68 aa8.96□□□□□ -0.98
CDK5RAP1-202ENST00000346416 CHTF8P0CG12 524 aa8.96□□□□□ -0.98
CDK5RAP1-202ENST00000346416 KMT2AQ03164 3969 aa8.95□□□□□ -0.98
CDK5RAP1-202ENST00000346416 KRTAP21-3Q3LHN1 58 aa8.95□□□□□ -0.98
CDK5RAP1-202ENST00000346416 ATP5EP2Q5VTU8 51 aa8.95□□□□□ -0.98
CDK5RAP1-202ENST00000346416 REG3GQ6UW15 175 aa8.95□□□□□ -0.98
CDK5RAP1-202ENST00000346416 PDE6GP18545 87 aa8.94□□□□□ -0.98
CDK5RAP1-202ENST00000346416 DEFB105AQ8NG35 78 aa8.94□□□□□ -0.98
CDK5RAP1-202ENST00000346416 IGKV3D-7A0A0C4DH55 119 aa8.93□□□□□ -0.98
CDK5RAP1-202ENST00000346416 TRBV7-4A0A0J9YYF1 115 aa8.93□□□□□ -0.98
CDK5RAP1-202ENST00000346416 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
CDK5RAP1-202ENST00000346416 HIST1H4AP62805 103 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP1-202ENST00000346416 Q8N377 158 aa8.92□□□□□ -0.98
CDK5RAP1-202ENST00000346416 Q6ZR54 194 aa8.92□□□□□ -0.98
CDK5RAP1-202ENST00000346416 ATOX1O00244 68 aa8.91□□□□□ -0.98
CDK5RAP1-202ENST00000346416 LINC01547P58512 204 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP1-202ENST00000346416 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
CDK5RAP1-202ENST00000346416 UBE2BP63146 152 aa8.9□□□□□ -0.98
CDK5RAP1-202ENST00000346416 A0A087WTM6 91 aa8.9□□□□□ -0.99
CDK5RAP1-202ENST00000346416 ERC2-IT1O76042 136 aa8.9□□□□□ -0.99
CDK5RAP1-202ENST00000346416 PHF5AQ7RTV0 110 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP1-202ENST00000346416 ST20-AS1Q8NBB2 130 aa8.89□□□□□ -0.99
CDK5RAP1-202ENST00000346416 LINC00474Q9P2X8 69 aa8.88□□□□□ -0.99
CDK5RAP1-202ENST00000346416 PANO1I0J062 215 aa8.87□□□□□ -0.99
CDK5RAP1-202ENST00000346416 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
CDK5RAP1-202ENST00000346416 IGLV5-48A0A075B6I7 105 aa8.87□□□□□ -0.99
CDK5RAP1-202ENST00000346416 UQCRQO14949 82 aa8.87□□□□□ -0.99
CDK5RAP1-202ENST00000346416 FAM19A1Q7Z5A9 133 aa8.87□□□□□ -0.99
CDK5RAP1-202ENST00000346416 C3orf22Q8N5N4 141 aa8.87□□□□□ -0.99
CDK5RAP1-202ENST00000346416 KRTAP11-1Q8IUC1 163 aa8.86□□□□□ -0.99
CDK5RAP1-202ENST00000346416 HECTD4Q9Y4D8 3996 aa8.86□□□□□ -0.99
CDK5RAP1-202ENST00000346416 PRLHP81277 87 aa8.86□□□□□ -0.99
CDK5RAP1-202ENST00000346416 LY6G6CO95867 125 aa8.85□□□□□ -0.99
CDK5RAP1-202ENST00000346416 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDK5RAP1-202ENST00000346416 DPH3Q96FX2 82 aa8.84□□□□□ -0.99
CDK5RAP1-202ENST00000346416 SS18L2Q9UHA2 77 aa8.84□□□□□ -0.99
CDK5RAP1-202ENST00000346416 A0A087WVE0 104 aa8.84□□□□□ -0.99
CDK5RAP1-202ENST00000346416 COX7CP15954 63 aa8.84□□□□□ -0.99
CDK5RAP1-202ENST00000346416 C1orf134Q5TEV5 83 aa8.83□□□□□ -1
CDK5RAP1-202ENST00000346416 C9orf153Q5TBE3 101 aa8.83□□□□□ -1
CDK5RAP1-202ENST00000346416 Q6ZVQ6 151 aa8.83□□□□□ -1
CDK5RAP1-202ENST00000346416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
CDK5RAP1-202ENST00000346416 SPACA4Q8TDM5 124 aa8.82□□□□□ -1
CDK5RAP1-202ENST00000346416 RTL8CO15255 209 aa8.81□□□□□ -1
CDK5RAP1-202ENST00000346416 WWC2-AS2Q96NR7 200 aa8.81□□□□□ -1
CDK5RAP1-202ENST00000346416 HIGD2AQ9BW72 106 aa8.81□□□□□ -1
CDK5RAP1-202ENST00000346416 SRRM2Q9UQ35 2752 aaKnown RBP8.81□□□□□ -1
CDK5RAP1-202ENST00000346416 TNP2Q05952 138 aa8.81□□□□□ -1
CDK5RAP1-202ENST00000346416 LINC00476Q8WZB0 136 aa8.79□□□□□ -1
CDK5RAP1-202ENST00000346416 EPM2AB3EWF7 344 aa8.78□□□□□ -1
CDK5RAP1-202ENST00000346416 HAMPP81172 84 aa8.78□□□□□ -1
CDK5RAP1-202ENST00000346416 SERP2Q8N6R1 65 aa8.78□□□□□ -1
CDK5RAP1-202ENST00000346416 H0Y9J4 135 aa8.78□□□□□ -1
CDK5RAP1-202ENST00000346416 CXCL6P80162 114 aa8.78□□□□□ -1
CDK5RAP1-202ENST00000346416 SMIM29Q86T20 159 aa8.78□□□□□ -1
CDK5RAP1-202ENST00000346416 C1orf137Q5JT78 98 aa8.77□□□□□ -1.01
CDK5RAP1-202ENST00000346416 DNAH17Q9UFH2 4485 aa8.77□□□□□ -1.01
CDK5RAP1-202ENST00000346416 CRYGAP11844 174 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms