RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
SGCA-202ENST00000344627 E9PLD3 99 aa7.17□□□□□ -1.26
SGCA-202ENST00000344627 J3QQQ9 107 aa7.17□□□□□ -1.26
SGCA-202ENST00000344627 NMUP48645 174 aa7.17□□□□□ -1.26
SGCA-202ENST00000344627 LINC00337Q8N6G1 96 aa7.17□□□□□ -1.26
SGCA-202ENST00000344627 MIEN1Q9BRT3 115 aa7.17□□□□□ -1.26
SGCA-202ENST00000344627 IGLV7-46A0A075B6I9 117 aa7.16□□□□□ -1.26
SGCA-202ENST00000344627 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
SGCA-202ENST00000344627 SMIM6P0DI80 62 aa7.15□□□□□ -1.26
SGCA-202ENST00000344627 DDTP30046 118 aa7.15□□□□□ -1.26
SGCA-202ENST00000344627 LCE2AQ5TA79 106 aaPredicted RBP7.15□□□□□ -1.26
SGCA-202ENST00000344627 FP248Q71RG6 208 aaPredicted RBP7.15□□□□□ -1.26
SGCA-202ENST00000344627 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.26
SGCA-202ENST00000344627 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
SGCA-202ENST00000344627 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
SGCA-202ENST00000344627 SPRR1AP35321 89 aa7.14□□□□□ -1.27
SGCA-202ENST00000344627 S100A7L2Q5SY68 101 aa7.14□□□□□ -1.27
SGCA-202ENST00000344627 ATOH7Q8N100 152 aa7.14□□□□□ -1.27
SGCA-202ENST00000344627 NPC2P61916 151 aa7.13□□□□□ -1.27
SGCA-202ENST00000344627 PYY3Q5JQD4 70 aa7.13□□□□□ -1.27
SGCA-202ENST00000344627 GAGE2AQ6NT46 116 aa7.13□□□□□ -1.27
SGCA-202ENST00000344627 Q8NBF4 154 aa7.13□□□□□ -1.27
SGCA-202ENST00000344627 TRBV10-2A0A0K0K1G8 114 aa7.12□□□□□ -1.27
SGCA-202ENST00000344627 LOC105371267A0A1B0GV96 52 aa7.12□□□□□ -1.27
SGCA-202ENST00000344627 B5MCH6 92 aa7.12□□□□□ -1.27
SGCA-202ENST00000344627 KRTAP4-16G5E9R7 235 aaPredicted RBP7.12□□□□□ -1.27
SGCA-202ENST00000344627 SPANXB1Q9NS25 103 aaPredicted RBP7.12□□□□□ -1.27
SGCA-202ENST00000344627 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
SGCA-202ENST00000344627 LOC107984156A0A0G2JMH3 177 aa7.11□□□□□ -1.27
SGCA-202ENST00000344627 ARL17AQ8IVW1 177 aa7.11□□□□□ -1.27
SGCA-202ENST00000344627 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
SGCA-202ENST00000344627 A0A0J9YXY3 114 aa7.09□□□□□ -1.27
SGCA-202ENST00000344627 ZNF815PA8K554 130 aa7.09□□□□□ -1.27
SGCA-202ENST00000344627 SPATA45Q537H7 98 aa7.09□□□□□ -1.27
SGCA-202ENST00000344627 ANKRD39Q53RE8 183 aa7.09□□□□□ -1.27
SGCA-202ENST00000344627 PAM16Q9Y3D7 125 aa7.09□□□□□ -1.27
SGCA-202ENST00000344627 FAT4Q6V0I7 4981 aa7.09□□□□□ -1.27
SGCA-202ENST00000344627 TRAV23DV6A0A075B6W5 121 aa7.08□□□□□ -1.28
SGCA-202ENST00000344627 NDUFC2O95298 119 aa7.08□□□□□ -1.28
SGCA-202ENST00000344627 SPINK1P00995 79 aa7.08□□□□□ -1.28
SGCA-202ENST00000344627 MOBPQ13875 183 aa7.08□□□□□ -1.28
SGCA-202ENST00000344627 DLEU1O43261 78 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 IGLV6-57P01721 117 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 HINT1P49773 126 aaPredicted RBP7.07□□□□□ -1.28
SGCA-202ENST00000344627 LINC00483Q53H64 154 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 ADAMTSL4-AS1Q5T5F5 129 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 SOSTDC1Q6X4U4 206 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 SCGB1D4Q6XE38 83 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 Q6ZRX8 168 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 OR13C6PQ8NH95 151 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 COPS9Q8WXC6 57 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 Q9BRP9 147 aa7.07□□□□□ -1.28
SGCA-202ENST00000344627 TIMM17BO60830 172 aa7.06□□□□□ -1.28
SGCA-202ENST00000344627 COX8AP10176 69 aa7.06□□□□□ -1.28
SGCA-202ENST00000344627 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
SGCA-202ENST00000344627 C9orf153Q5TBE3 101 aa7.05□□□□□ -1.28
SGCA-202ENST00000344627 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
SGCA-202ENST00000344627 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
SGCA-202ENST00000344627 Q6ZVH6 145 aa7.04□□□□□ -1.28
SGCA-202ENST00000344627 SSBP3-AS1Q7Z2R9 100 aa7.04□□□□□ -1.28
SGCA-202ENST00000344627 C12orf57Q99622 126 aa7.04□□□□□ -1.28
SGCA-202ENST00000344627 CBY1Q9Y3M2 126 aa7.04□□□□□ -1.28
SGCA-202ENST00000344627 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
SGCA-202ENST00000344627 PCP2Q8IVA1 136 aa7.03□□□□□ -1.28
SGCA-202ENST00000344627 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
SGCA-202ENST00000344627 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
SGCA-202ENST00000344627 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
SGCA-202ENST00000344627 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
SGCA-202ENST00000344627 LINC00308Q8TCZ7 52 aa7.02□□□□□ -1.29
SGCA-202ENST00000344627 UQCR10Q9UDW1 63 aa7.02□□□□□ -1.29
SGCA-202ENST00000344627 C14orf144Q96I85 54 aa7.01□□□□□ -1.29
SGCA-202ENST00000344627 SPANXCQ9NY87 97 aa7.01□□□□□ -1.29
SGCA-202ENST00000344627 HIGD1BQ9P298 99 aa7.01□□□□□ -1.29
SGCA-202ENST00000344627 IFITM1P13164 125 aa7□□□□□ -1.29
SGCA-202ENST00000344627 KRTAP13-3Q3SY46 172 aa7□□□□□ -1.29
SGCA-202ENST00000344627 LINC00518Q8N0U6 118 aa7□□□□□ -1.29
SGCA-202ENST00000344627 KRTAP9-6A0A140TA67 174 aa6.99□□□□□ -1.29
SGCA-202ENST00000344627 LINC01547P58512 204 aaPredicted RBP6.99□□□□□ -1.29
SGCA-202ENST00000344627 LITAFQ99732 161 aa6.99□□□□□ -1.29
SGCA-202ENST00000344627 SPANXDQ9BXN6 97 aa6.99□□□□□ -1.29
SGCA-202ENST00000344627 TTTY13Q9BZ97 58 aa6.99□□□□□ -1.29
SGCA-202ENST00000344627 SLC25A20O43772 301 aa6.98□□□□□ -1.29
SGCA-202ENST00000344627 Q8N377 158 aa6.98□□□□□ -1.29
SGCA-202ENST00000344627 TAL2Q16559 108 aa6.97□□□□□ -1.29
SGCA-202ENST00000344627 HIST1H4GQ99525 98 aa6.97□□□□□ -1.29
SGCA-202ENST00000344627 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
SGCA-202ENST00000344627 HRCT1Q6UXD1 115 aa6.96□□□□□ -1.3
SGCA-202ENST00000344627 COX7BP24311 80 aa6.95□□□□□ -1.3
SGCA-202ENST00000344627 C6orf99Q4VX62 202 aa6.95□□□□□ -1.3
SGCA-202ENST00000344627 DEFB105AQ8NG35 78 aa6.95□□□□□ -1.3
SGCA-202ENST00000344627 LAMTOR3Q9UHA4 124 aa6.94□□□□□ -1.3
SGCA-202ENST00000344627 HSD52Q0P140 79 aa6.93□□□□□ -1.3
SGCA-202ENST00000344627 PRO1933Q9H354 126 aa6.93□□□□□ -1.3
SGCA-202ENST00000344627 A6NDN8 102 aa6.92□□□□□ -1.3
SGCA-202ENST00000344627 ELOF1P60002 83 aaKnown RBP6.92□□□□□ -1.3
SGCA-202ENST00000344627 C2orf91Q6ZV80 131 aa6.92□□□□□ -1.3
SGCA-202ENST00000344627 Q1RN00 199 aa6.91□□□□□ -1.3
SGCA-202ENST00000344627 M0R143 59 aa6.9□□□□□ -1.3
SGCA-202ENST00000344627 SPRR1BP22528 89 aa6.9□□□□□ -1.3
SGCA-202ENST00000344627 XP32Q5T750 250 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms