RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TRBV7-6A0A0J9YX20 115 aa12.04□□□□□ -0.48
HOXA9-201ENST00000343483 Q6JHZ5 121 aa12.03□□□□□ -0.48
HOXA9-201ENST00000343483 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.48
HOXA9-201ENST00000343483 FAM168BA1KXE4 195 aa12.02□□□□□ -0.49
HOXA9-201ENST00000343483 H3BQ85 93 aa12.02□□□□□ -0.49
HOXA9-201ENST00000343483 IGKV3D-7A0A0C4DH55 119 aa12.01□□□□□ -0.49
HOXA9-201ENST00000343483 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
HOXA9-201ENST00000343483 NBDYA0A0U1RRE5 68 aa12.01□□□□□ -0.49
HOXA9-201ENST00000343483 CCDC179H3BU77 68 aa12.01□□□□□ -0.49
HOXA9-201ENST00000343483 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.01□□□□□ -0.49
HOXA9-201ENST00000343483 C7orf33Q8WU49 177 aa12.01□□□□□ -0.49
HOXA9-201ENST00000343483 KMT2CQ8NEZ4 4911 aaKnown RBP11.99□□□□□ -0.49
HOXA9-201ENST00000343483 PLA2G2DQ9UNK4 145 aa11.99□□□□□ -0.49
HOXA9-201ENST00000343483 Q6ZQT0 140 aa11.98□□□□□ -0.49
HOXA9-201ENST00000343483 LOC110117498A0A087WWA1 95 aa11.98□□□□□ -0.49
HOXA9-201ENST00000343483 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.97□□□□□ -0.49
HOXA9-201ENST00000343483 CNBPP62633 177 aaKnown RBP11.96□□□□□ -0.49
HOXA9-201ENST00000343483 FAM19A5Q7Z5A7 132 aaPredicted RBP11.96□□□□□ -0.49
HOXA9-201ENST00000343483 LINC00528Q8N1L1 170 aa11.96□□□□□ -0.49
HOXA9-201ENST00000343483 DNAH10Q8IVF4 4471 aa11.96□□□□□ -0.49
HOXA9-201ENST00000343483 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.49
HOXA9-201ENST00000343483 GHRHP01286 108 aa11.96□□□□□ -0.5
HOXA9-201ENST00000343483 DSCR8Q96T75 97 aa11.96□□□□□ -0.5
HOXA9-201ENST00000343483 RPL37AP8A6NKH3 93 aa11.95□□□□□ -0.5
HOXA9-201ENST00000343483 KCNQ1DNQ9H478 68 aa11.95□□□□□ -0.5
HOXA9-201ENST00000343483 B5MCH6 92 aa11.95□□□□□ -0.5
HOXA9-201ENST00000343483 C14orf177Q52M58 125 aa11.95□□□□□ -0.5
HOXA9-201ENST00000343483 KRTAP7-1Q8IUC3 87 aa11.95□□□□□ -0.5
HOXA9-201ENST00000343483 IGLV5-37A0A075B6J1 123 aa11.94□□□□□ -0.5
HOXA9-201ENST00000343483 M0R2N4 97 aa11.93□□□□□ -0.5
HOXA9-201ENST00000343483 UBL5Q9BZL1 73 aa11.92□□□□□ -0.5
HOXA9-201ENST00000343483 A0A096LNI7 61 aa11.91□□□□□ -0.5
HOXA9-201ENST00000343483 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
HOXA9-201ENST00000343483 PDE6GP18545 87 aa11.91□□□□□ -0.5
HOXA9-201ENST00000343483 HIST1H4AP62805 103 aaKnown RBP11.91□□□□□ -0.5
HOXA9-201ENST00000343483 MRPL55Q7Z7F7 128 aaKnown RBP11.91□□□□□ -0.5
HOXA9-201ENST00000343483 IGLV1-50A0A075B6I6 118 aa11.9□□□□□ -0.5
HOXA9-201ENST00000343483 C16orf90A8MZG2 172 aa11.9□□□□□ -0.51
HOXA9-201ENST00000343483 ATP5EP2Q5VTU8 51 aa11.9□□□□□ -0.51
HOXA9-201ENST00000343483 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
HOXA9-201ENST00000343483 A0A087WVE0 104 aa11.88□□□□□ -0.51
HOXA9-201ENST00000343483 C3orf84H3BNL1 204 aa11.88□□□□□ -0.51
HOXA9-201ENST00000343483 Q6ZRN7 208 aaPredicted RBP11.88□□□□□ -0.51
HOXA9-201ENST00000343483 PRYO14603 147 aa11.87□□□□□ -0.51
HOXA9-201ENST00000343483 TRBV7-4A0A0J9YYF1 115 aa11.86□□□□□ -0.51
HOXA9-201ENST00000343483 ATOX1O00244 68 aa11.86□□□□□ -0.51
HOXA9-201ENST00000343483 ETDCA0A1B0GVM5 59 aa11.84□□□□□ -0.51
HOXA9-201ENST00000343483 Q6ZRX8 168 aa11.83□□□□□ -0.52
HOXA9-201ENST00000343483 SS18L2Q9UHA2 77 aa11.83□□□□□ -0.52
HOXA9-201ENST00000343483 RYR3Q15413 4870 aa11.82□□□□□ -0.52
HOXA9-201ENST00000343483 A0A1W2PNN7 141 aa11.82□□□□□ -0.52
HOXA9-201ENST00000343483 KRTAP4-16G5E9R7 235 aaPredicted RBP11.82□□□□□ -0.52
HOXA9-201ENST00000343483 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
HOXA9-201ENST00000343483 SPRR1AP35321 89 aa11.82□□□□□ -0.52
HOXA9-201ENST00000343483 C3orf22Q8N5N4 141 aa11.82□□□□□ -0.52
HOXA9-201ENST00000343483 SACSQ9NZJ4 4579 aa11.81□□□□□ -0.52
HOXA9-201ENST00000343483 UQCRQO14949 82 aa11.81□□□□□ -0.52
HOXA9-201ENST00000343483 C9orf163Q8N9P6 203 aa11.81□□□□□ -0.52
HOXA9-201ENST00000343483 HYDINQ4G0P3 5121 aa11.81□□□□□ -0.52
HOXA9-201ENST00000343483 Q6ZVQ6 151 aa11.8□□□□□ -0.52
HOXA9-201ENST00000343483 FAM19A1Q7Z5A9 133 aa11.8□□□□□ -0.52
HOXA9-201ENST00000343483 DHRS4-AS1Q9P1J3 65 aa11.8□□□□□ -0.52
HOXA9-201ENST00000343483 DEFB105AQ8NG35 78 aa11.79□□□□□ -0.52
HOXA9-201ENST00000343483 Q9BRP9 147 aa11.79□□□□□ -0.52
HOXA9-201ENST00000343483 COX7CP15954 63 aa11.79□□□□□ -0.52
HOXA9-201ENST00000343483 REG3GQ6UW15 175 aa11.79□□□□□ -0.52
HOXA9-201ENST00000343483 HAMPP81172 84 aa11.78□□□□□ -0.52
HOXA9-201ENST00000343483 VPS13DQ5THJ4 4388 aa11.77□□□□□ -0.52
HOXA9-201ENST00000343483 LINC01547P58512 204 aaPredicted RBP11.77□□□□□ -0.52
HOXA9-201ENST00000343483 C9orf153Q5TBE3 101 aa11.77□□□□□ -0.52
HOXA9-201ENST00000343483 Q6ZR54 194 aa11.76□□□□□ -0.53
HOXA9-201ENST00000343483 Q8N377 158 aa11.76□□□□□ -0.53
HOXA9-201ENST00000343483 PKIGQ9Y2B9 76 aa11.75□□□□□ -0.53
HOXA9-201ENST00000343483 KMT2AQ03164 3969 aa11.75□□□□□ -0.53
HOXA9-201ENST00000343483 A0A087WTM6 91 aa11.75□□□□□ -0.53
HOXA9-201ENST00000343483 UBE2BP63146 152 aa11.74□□□□□ -0.53
HOXA9-201ENST00000343483 RYR2Q92736 4967 aa11.73□□□□□ -0.53
HOXA9-201ENST00000343483 LY6G6CO95867 125 aa11.73□□□□□ -0.53
HOXA9-201ENST00000343483 PHF5AQ7RTV0 110 aaKnown RBP11.72□□□□□ -0.53
HOXA9-201ENST00000343483 SERP2Q8N6R1 65 aa11.72□□□□□ -0.53
HOXA9-201ENST00000343483 LINC00474Q9P2X8 69 aa11.72□□□□□ -0.53
HOXA9-201ENST00000343483 CXCL6P80162 114 aa11.71□□□□□ -0.53
HOXA9-201ENST00000343483 ST20-AS1Q8NBB2 130 aa11.71□□□□□ -0.54
HOXA9-201ENST00000343483 ERC2-IT1O76042 136 aa11.7□□□□□ -0.54
HOXA9-201ENST00000343483 FUSP35637 526 aaKnown RBP eCLIP11.7□□□□□ -0.54
HOXA9-201ENST00000343483 DPH3Q96FX2 82 aa11.7□□□□□ -0.54
HOXA9-201ENST00000343483 PANO1I0J062 215 aa11.69□□□□□ -0.54
HOXA9-201ENST00000343483 IGLV5-48A0A075B6I7 105 aa11.68□□□□□ -0.54
HOXA9-201ENST00000343483 PRLHP81277 87 aa11.68□□□□□ -0.54
HOXA9-201ENST00000343483 C1orf134Q5TEV5 83 aa11.68□□□□□ -0.54
HOXA9-201ENST00000343483 ALMS1Q8TCU4 4167 aa11.68□□□□□ -0.54
HOXA9-201ENST00000343483 LCE6AA0A183 80 aa11.67□□□□□ -0.54
HOXA9-201ENST00000343483 CRYGAP11844 174 aa11.67□□□□□ -0.54
HOXA9-201ENST00000343483 KRTAP11-1Q8IUC1 163 aa11.67□□□□□ -0.54
HOXA9-201ENST00000343483 SCXQ7RTU7 201 aa11.66□□□□□ -0.54
HOXA9-201ENST00000343483 LINC00476Q8WZB0 136 aa11.66□□□□□ -0.54
HOXA9-201ENST00000343483 RTL8CO15255 209 aa11.64□□□□□ -0.55
HOXA9-201ENST00000343483 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.64□□□□□ -0.55
HOXA9-201ENST00000343483 SPACA4Q8TDM5 124 aa11.63□□□□□ -0.55
HOXA9-201ENST00000343483 HIGD2AQ9BW72 106 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms