RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 M0QY20 66 aa11.39□□□□□ -0.59
CDK11B-201ENST00000340677 IGLV1-51P01701 117 aa11.39□□□□□ -0.59
CDK11B-201ENST00000340677 MAP6D1Q9H9H5 199 aa11.39□□□□□ -0.59
CDK11B-201ENST00000340677 FBN3Q75N90 2809 aa11.38□□□□□ -0.59
CDK11B-201ENST00000340677 DEFB131AP59861 70 aa11.38□□□□□ -0.59
CDK11B-201ENST00000340677 FAM30AQ9NZY2 134 aa11.38□□□□□ -0.59
CDK11B-201ENST00000340677 IGLV4-60A0A075B6I1 120 aa11.37□□□□□ -0.59
CDK11B-201ENST00000340677 CASC2Q6XLA1 102 aa11.37□□□□□ -0.59
CDK11B-201ENST00000340677 COX6A2Q02221 97 aa11.36□□□□□ -0.59
CDK11B-201ENST00000340677 HIGD2BQ4VC39 106 aa11.35□□□□□ -0.59
CDK11B-201ENST00000340677 LINC00612Q8N6U2 182 aa11.35□□□□□ -0.59
CDK11B-201ENST00000340677 WNK1Q9H4A3 2382 aa11.34□□□□□ -0.59
CDK11B-201ENST00000340677 ODF3L2Q3SX64 289 aa11.34□□□□□ -0.59
CDK11B-201ENST00000340677 B9D2Q9BPU9 175 aa11.34□□□□□ -0.59
CDK11B-201ENST00000340677 K7EQD1 137 aa11.33□□□□□ -0.6
CDK11B-201ENST00000340677 Q8NAQ8 132 aa11.33□□□□□ -0.6
CDK11B-201ENST00000340677 SMIM1B2RUZ4 78 aa11.32□□□□□ -0.6
CDK11B-201ENST00000340677 C9orf66Q5T8R8 295 aa11.32□□□□□ -0.6
CDK11B-201ENST00000340677 IGHV3-73A0A0B4J1V6 119 aa11.32□□□□□ -0.6
CDK11B-201ENST00000340677 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
CDK11B-201ENST00000340677 LINC00467Q9BRT7 94 aa11.32□□□□□ -0.6
CDK11B-201ENST00000340677 CUBNO60494 3623 aa11.31□□□□□ -0.6
CDK11B-201ENST00000340677 LINC00208Q96KT6 92 aa11.31□□□□□ -0.6
CDK11B-201ENST00000340677 SPINK13Q1W4C9 94 aa11.31□□□□□ -0.6
CDK11B-201ENST00000340677 CCL18P55774 89 aa11.3□□□□□ -0.6
CDK11B-201ENST00000340677 IGHV3OR16-9A0A0B4J2B5 98 aa11.29□□□□□ -0.6
CDK11B-201ENST00000340677 PDE6GP18545 87 aa11.29□□□□□ -0.6
CDK11B-201ENST00000340677 ELOF1P60002 83 aaKnown RBP11.29□□□□□ -0.6
CDK11B-201ENST00000340677 HTN1P15515 57 aa11.28□□□□□ -0.6
CDK11B-201ENST00000340677 NIPBLQ6KC79 2804 aaeCLIP11.28□□□□□ -0.61e-6■■■■□ 21.7
CDK11B-201ENST00000340677 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.28□□□□□ -0.6
CDK11B-201ENST00000340677 IGHV3-53P01767 116 aa11.28□□□□□ -0.6
CDK11B-201ENST00000340677 SMIM29Q86T20 159 aa11.28□□□□□ -0.6
CDK11B-201ENST00000340677 LINC00242Q5T6M2 205 aa11.27□□□□□ -0.61
CDK11B-201ENST00000340677 COX7B2Q8TF08 81 aa11.27□□□□□ -0.61
CDK11B-201ENST00000340677 Q9BRP9 147 aa11.26□□□□□ -0.61
CDK11B-201ENST00000340677 X6R8D5 127 aa11.26□□□□□ -0.61
CDK11B-201ENST00000340677 SPINK7P58062 85 aa11.26□□□□□ -0.61
CDK11B-201ENST00000340677 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
CDK11B-201ENST00000340677 INSP01308 110 aa11.25□□□□□ -0.61
CDK11B-201ENST00000340677 KRTAP24-1Q3LI83 254 aa11.24□□□□□ -0.61
CDK11B-201ENST00000340677 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
CDK11B-201ENST00000340677 DNHD1Q96M86 4753 aa11.24□□□□□ -0.61
CDK11B-201ENST00000340677 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
CDK11B-201ENST00000340677 C1orf134Q5TEV5 83 aa11.23□□□□□ -0.61
CDK11B-201ENST00000340677 TRBV6-4A0A1B0GX49 114 aa11.22□□□□□ -0.61
CDK11B-201ENST00000340677 NDUFB1O75438 58 aa11.22□□□□□ -0.61
CDK11B-201ENST00000340677 CHCHD7Q9BUK0 85 aa11.22□□□□□ -0.61
CDK11B-201ENST00000340677 LINC00158P58513 81 aa11.2□□□□□ -0.62
CDK11B-201ENST00000340677 ST20-AS1Q8NBB2 130 aa11.19□□□□□ -0.62
CDK11B-201ENST00000340677 IGHV3OR16-12A0A075B7B8 117 aa11.18□□□□□ -0.62
CDK11B-201ENST00000340677 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
CDK11B-201ENST00000340677 Q6ZSN1 163 aa11.17□□□□□ -0.62
CDK11B-201ENST00000340677 A0A1W2PNM2 257 aa11.16□□□□□ -0.62
CDK11B-201ENST00000340677 CSAG1Q6PB30 78 aa11.15□□□□□ -0.62
CDK11B-201ENST00000340677 GIG44P09565 113 aaPredicted RBP11.15□□□□□ -0.62
CDK11B-201ENST00000340677 CHCHD10Q8WYQ3 142 aaPredicted RBP11.14□□□□□ -0.63
CDK11B-201ENST00000340677 PLAC8Q9NZF1 115 aa11.14□□□□□ -0.63
CDK11B-201ENST00000340677 ETDCA0A1B0GVM5 59 aa11.14□□□□□ -0.63
CDK11B-201ENST00000340677 RTL8CO15255 209 aa11.14□□□□□ -0.63
CDK11B-201ENST00000340677 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
CDK11B-201ENST00000340677 WFDC10AQ9H1F0 79 aa11.13□□□□□ -0.63
CDK11B-201ENST00000340677 LINC01558Q9Y6Z2 57 aa11.12□□□□□ -0.63
CDK11B-201ENST00000340677 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
CDK11B-201ENST00000340677 Q6ZR54 194 aa11.11□□□□□ -0.63
CDK11B-201ENST00000340677 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.11□□□□□ -0.63
CDK11B-201ENST00000340677 ATRQ13535 2644 aa11.11□□□□□ -0.63
CDK11B-201ENST00000340677 LINC00575Q6W349 94 aa11.1□□□□□ -0.63
CDK11B-201ENST00000340677 C16orf74Q96GX8 76 aa11.1□□□□□ -0.63
CDK11B-201ENST00000340677 A0A087X002 238 aa11.09□□□□□ -0.63
CDK11B-201ENST00000340677 ROMO1P60602 79 aa11.09□□□□□ -0.63
CDK11B-201ENST00000340677 SPANXA2-OT1Q8N9U9 137 aa11.09□□□□□ -0.63
CDK11B-201ENST00000340677 TENM1Q9UKZ4 2725 aa11.08□□□□□ -0.64
CDK11B-201ENST00000340677 EGFEM1PQ0D2K5 195 aa11.06□□□□□ -0.64
CDK11B-201ENST00000340677 COA5Q86WW8 74 aa11.05□□□□□ -0.64
CDK11B-201ENST00000340677 SPAG11BQ08648 103 aa11.03□□□□□ -0.64
CDK11B-201ENST00000340677 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
CDK11B-201ENST00000340677 TOMM7Q9P0U1 55 aa11.03□□□□□ -0.64
CDK11B-201ENST00000340677 COX7BP24311 80 aa11.02□□□□□ -0.64
CDK11B-201ENST00000340677 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.65
CDK11B-201ENST00000340677 Q6ZQY7 126 aa11.01□□□□□ -0.65
CDK11B-201ENST00000340677 KLK12Q9UKR0 248 aa11.01□□□□□ -0.65
CDK11B-201ENST00000340677 COL6A5A8TX70 2615 aa11□□□□□ -0.65
CDK11B-201ENST00000340677 VWFP04275 2813 aa11□□□□□ -0.65
CDK11B-201ENST00000340677 TRGV1A0A0A0MS02 117 aa10.99□□□□□ -0.65
CDK11B-201ENST00000340677 FBN1P35555 2871 aaKnown RBP10.99□□□□□ -0.65
CDK11B-201ENST00000340677 NOTCH3Q9UM47 2321 aa10.99□□□□□ -0.65
CDK11B-201ENST00000340677 NOP10Q9NPE3 64 aaKnown RBP10.98□□□□□ -0.65
CDK11B-201ENST00000340677 LINC00959A0A1B0GUT2 108 aa10.97□□□□□ -0.65
CDK11B-201ENST00000340677 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
CDK11B-201ENST00000340677 KCNQ1DNQ9H478 68 aa10.97□□□□□ -0.65
CDK11B-201ENST00000340677 H3BQ85 93 aa10.95□□□□□ -0.66
CDK11B-201ENST00000340677 KRTAP10-11P60412 298 aa10.95□□□□□ -0.66
CDK11B-201ENST00000340677 STAB1Q9NY15 2570 aa10.93□□□□□ -0.66
CDK11B-201ENST00000340677 DEFB135Q30KP9 77 aa10.91□□□□□ -0.66
CDK11B-201ENST00000340677 IGKV3OR2-268A0A0C4DH90 116 aa10.9□□□□□ -0.66
CDK11B-201ENST00000340677 TRGV4A0A0C4DH28 118 aa10.9□□□□□ -0.67
CDK11B-201ENST00000340677 NOTCH2NLQ7Z3S9 236 aa10.89□□□□□ -0.67
CDK11B-201ENST00000340677 P0C880 135 aa10.89□□□□□ -0.67
CDK11B-201ENST00000340677 IGHV4-28A0A0C4DH34 117 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms