RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 KCNQ1DNQ9H478 68 aa10.44□□□□□ -0.74
SCNN1A-202ENST00000338748 PLA2G2DQ9UNK4 145 aa10.44□□□□□ -0.74
SCNN1A-202ENST00000338748 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
SCNN1A-202ENST00000338748 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.42□□□□□ -0.74
SCNN1A-202ENST00000338748 LOC107984640A0A0U1RRK4 108 aa10.42□□□□□ -0.74
SCNN1A-202ENST00000338748 JMJD7-PLA2G4BH0Y9G9 81 aa10.42□□□□□ -0.74
SCNN1A-202ENST00000338748 LINC00846Q9NV44 126 aa10.42□□□□□ -0.74
SCNN1A-202ENST00000338748 IGLV5-37A0A075B6J1 123 aa10.41□□□□□ -0.74
SCNN1A-202ENST00000338748 A0A096LNI7 61 aa10.4□□□□□ -0.74
SCNN1A-202ENST00000338748 TRBV7-7A0A0K0K1E9 115 aa10.4□□□□□ -0.74
SCNN1A-202ENST00000338748 NBDYA0A0U1RRE5 68 aa10.4□□□□□ -0.74
SCNN1A-202ENST00000338748 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
SCNN1A-202ENST00000338748 CCKP06307 115 aa10.39□□□□□ -0.75
SCNN1A-202ENST00000338748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.39□□□□□ -0.75
SCNN1A-202ENST00000338748 LINC00643Q86TS7 51 aa10.39□□□□□ -0.75
SCNN1A-202ENST00000338748 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
SCNN1A-202ENST00000338748 IGLV1-50A0A075B6I6 118 aa10.39□□□□□ -0.75
SCNN1A-202ENST00000338748 HECTD4Q9Y4D8 3996 aa10.38□□□□□ -0.75
SCNN1A-202ENST00000338748 IGKV2-24A0A0C4DH68 120 aa10.38□□□□□ -0.75
SCNN1A-202ENST00000338748 TGP01266 2768 aa10.38□□□□□ -0.75
SCNN1A-202ENST00000338748 KRTAP4-16G5E9R7 235 aaPredicted RBP10.37□□□□□ -0.75
SCNN1A-202ENST00000338748 MRPL55Q7Z7F7 128 aaKnown RBP10.37□□□□□ -0.75
SCNN1A-202ENST00000338748 LRCOL1A6NCL2 159 aa10.37□□□□□ -0.75
SCNN1A-202ENST00000338748 Q6ZRN7 208 aaPredicted RBP10.37□□□□□ -0.75
SCNN1A-202ENST00000338748 M0R2N4 97 aa10.36□□□□□ -0.75
SCNN1A-202ENST00000338748 RBM3P98179 157 aaKnown RBP10.36□□□□□ -0.75
SCNN1A-202ENST00000338748 A0A1W2PNN7 141 aa10.34□□□□□ -0.75
SCNN1A-202ENST00000338748 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
SCNN1A-202ENST00000338748 SPRR1AP35321 89 aa10.34□□□□□ -0.75
SCNN1A-202ENST00000338748 Q6ZQT0 140 aa10.34□□□□□ -0.75
SCNN1A-202ENST00000338748 Q9BRP9 147 aa10.34□□□□□ -0.75
SCNN1A-202ENST00000338748 IMUPQ9GZP8 106 aa10.34□□□□□ -0.75
SCNN1A-202ENST00000338748 B5MCH6 92 aa10.33□□□□□ -0.76
SCNN1A-202ENST00000338748 PRYO14603 147 aa10.33□□□□□ -0.76
SCNN1A-202ENST00000338748 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
SCNN1A-202ENST00000338748 Q6ZRX8 168 aa10.33□□□□□ -0.76
SCNN1A-202ENST00000338748 CCDC179H3BU77 68 aa10.33□□□□□ -0.76
SCNN1A-202ENST00000338748 LOC110117498A0A087WWA1 95 aa10.31□□□□□ -0.76
SCNN1A-202ENST00000338748 FAM236AA0A1B0GUQ0 79 aa10.31□□□□□ -0.76
SCNN1A-202ENST00000338748 FAM236BA0A1B0GV22 79 aa10.31□□□□□ -0.76
SCNN1A-202ENST00000338748 DNAH17Q9UFH2 4485 aa10.31□□□□□ -0.76
SCNN1A-202ENST00000338748 C14orf177Q52M58 125 aa10.3□□□□□ -0.76
SCNN1A-202ENST00000338748 ETDCA0A1B0GVM5 59 aa10.3□□□□□ -0.76
SCNN1A-202ENST00000338748 IGKV3D-7A0A0C4DH55 119 aa10.29□□□□□ -0.76
SCNN1A-202ENST00000338748 DEFB105AQ8NG35 78 aa10.29□□□□□ -0.76
SCNN1A-202ENST00000338748 DSCR8Q96T75 97 aa10.29□□□□□ -0.76
SCNN1A-202ENST00000338748 H3BQ85 93 aa10.29□□□□□ -0.76
SCNN1A-202ENST00000338748 LINC01547P58512 204 aaPredicted RBP10.29□□□□□ -0.76
SCNN1A-202ENST00000338748 Q8N377 158 aa10.28□□□□□ -0.76
SCNN1A-202ENST00000338748 TRBV7-4A0A0J9YYF1 115 aa10.27□□□□□ -0.76
SCNN1A-202ENST00000338748 ERC2-IT1O76042 136 aa10.27□□□□□ -0.76
SCNN1A-202ENST00000338748 C9orf163Q8N9P6 203 aa10.27□□□□□ -0.77
SCNN1A-202ENST00000338748 ST20-AS1Q8NBB2 130 aa10.27□□□□□ -0.77
SCNN1A-202ENST00000338748 SRRM2Q9UQ35 2752 aaKnown RBP10.27□□□□□ -0.77
SCNN1A-202ENST00000338748 PANO1I0J062 215 aa10.26□□□□□ -0.77
SCNN1A-202ENST00000338748 FUSP35637 526 aaKnown RBP eCLIP10.26□□□□□ -0.77
SCNN1A-202ENST00000338748 REG3GQ6UW15 175 aa10.26□□□□□ -0.77
SCNN1A-202ENST00000338748 KRTAP11-1Q8IUC1 163 aa10.26□□□□□ -0.77
SCNN1A-202ENST00000338748 C3orf22Q8N5N4 141 aa10.26□□□□□ -0.77
SCNN1A-202ENST00000338748 DHRS4-AS1Q9P1J3 65 aa10.26□□□□□ -0.77
SCNN1A-202ENST00000338748 Q6JHZ5 121 aa10.25□□□□□ -0.77
SCNN1A-202ENST00000338748 GHRHP01286 108 aa10.24□□□□□ -0.77
SCNN1A-202ENST00000338748 PHF5AQ7RTV0 110 aaKnown RBP10.23□□□□□ -0.77
SCNN1A-202ENST00000338748 DNAH6Q9C0G6 4158 aa10.22□□□□□ -0.77
SCNN1A-202ENST00000338748 UBE2BP63146 152 aa10.22□□□□□ -0.77
SCNN1A-202ENST00000338748 PRLHP81277 87 aa10.22□□□□□ -0.77
SCNN1A-202ENST00000338748 FRAS1Q86XX4 4008 aa10.22□□□□□ -0.77
SCNN1A-202ENST00000338748 DNAH8Q96JB1 4490 aa10.21□□□□□ -0.77
SCNN1A-202ENST00000338748 Q6ZR54 194 aa10.21□□□□□ -0.77
SCNN1A-202ENST00000338748 SS18L2Q9UHA2 77 aa10.21□□□□□ -0.77
SCNN1A-202ENST00000338748 A0A087WVE0 104 aa10.21□□□□□ -0.78
SCNN1A-202ENST00000338748 PDE6GP18545 87 aa10.2□□□□□ -0.78
SCNN1A-202ENST00000338748 HYDINQ4G0P3 5121 aa10.2□□□□□ -0.78
SCNN1A-202ENST00000338748 A0A087WTM6 91 aa10.19□□□□□ -0.78
SCNN1A-202ENST00000338748 IGLV5-48A0A075B6I7 105 aa10.19□□□□□ -0.78
SCNN1A-202ENST00000338748 UBL5Q9BZL1 73 aa10.19□□□□□ -0.78
SCNN1A-202ENST00000338748 FAM19A1Q7Z5A9 133 aa10.18□□□□□ -0.78
SCNN1A-202ENST00000338748 Q6ZVQ6 151 aa10.17□□□□□ -0.78
SCNN1A-202ENST00000338748 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.17□□□□□ -0.78
SCNN1A-202ENST00000338748 DNAH11Q96DT5 4516 aa10.16□□□□□ -0.78
SCNN1A-202ENST00000338748 DNAH5Q8TE73 4624 aa10.16□□□□□ -0.78
SCNN1A-202ENST00000338748 TNP2Q05952 138 aa10.15□□□□□ -0.78
SCNN1A-202ENST00000338748 HIST1H4AP62805 103 aaKnown RBP10.15□□□□□ -0.78
SCNN1A-202ENST00000338748 ALMS1Q8TCU4 4167 aa10.14□□□□□ -0.79
SCNN1A-202ENST00000338748 HIGD2AQ9BW72 106 aa10.13□□□□□ -0.79
SCNN1A-202ENST00000338748 ATP5EP2Q5VTU8 51 aa10.13□□□□□ -0.79
SCNN1A-202ENST00000338748 SPACA4Q8TDM5 124 aa10.13□□□□□ -0.79
SCNN1A-202ENST00000338748 LY6G6CO95867 125 aa10.12□□□□□ -0.79
SCNN1A-202ENST00000338748 SMIM29Q86T20 159 aa10.12□□□□□ -0.79
SCNN1A-202ENST00000338748 KRTAP21-3Q3LHN1 58 aa10.11□□□□□ -0.79
SCNN1A-202ENST00000338748 HAMPP81172 84 aa10.11□□□□□ -0.79
SCNN1A-202ENST00000338748 LINC00474Q9P2X8 69 aa10.11□□□□□ -0.79
SCNN1A-202ENST00000338748 C3orf84H3BNL1 204 aa10.1□□□□□ -0.79
SCNN1A-202ENST00000338748 RTL8CO15255 209 aa10.1□□□□□ -0.79
SCNN1A-202ENST00000338748 FAT2Q9NYQ8 4349 aa10.1□□□□□ -0.79
SCNN1A-202ENST00000338748 EPM2AB3EWF7 344 aa10.1□□□□□ -0.79
SCNN1A-202ENST00000338748 ATOX1O00244 68 aa10.1□□□□□ -0.79
SCNN1A-202ENST00000338748 SCXQ7RTU7 201 aa10.09□□□□□ -0.79
SCNN1A-202ENST00000338748 DPH3Q96FX2 82 aa10.09□□□□□ -0.79
SCNN1A-202ENST00000338748 A0A1W2PNM2 257 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms