RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 LINC00167Q96N53 147 aa5.71□□□□□ -1.5
LSAMP-201ENST00000333617 ORMDL1Q9P0S3 153 aa5.71□□□□□ -1.5
LSAMP-201ENST00000333617 GAGE2DQ9UEU5 116 aa5.71□□□□□ -1.5
LSAMP-201ENST00000333617 VPS13DQ5THJ4 4388 aa5.71□□□□□ -1.5
LSAMP-201ENST00000333617 TRAV23DV6A0A075B6W5 121 aa5.7□□□□□ -1.5
LSAMP-201ENST00000333617 TRBV10-3A0A0K0K1G6 114 aa5.7□□□□□ -1.5
LSAMP-201ENST00000333617 VPREB1P12018 145 aa5.7□□□□□ -1.5
LSAMP-201ENST00000333617 CASC10Q5T4H9 136 aa5.7□□□□□ -1.5
LSAMP-201ENST00000333617 APLNQ9ULZ1 77 aa5.7□□□□□ -1.5
LSAMP-201ENST00000333617 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
LSAMP-201ENST00000333617 M0R378 163 aa5.69□□□□□ -1.5
LSAMP-201ENST00000333617 INAFM2P0DMQ5 153 aa5.69□□□□□ -1.5
LSAMP-201ENST00000333617 MEGF8Q7Z7M0 2845 aa5.69□□□□□ -1.5
LSAMP-201ENST00000333617 TLX1NBP0CAT3 122 aa5.68□□□□□ -1.5
LSAMP-201ENST00000333617 XGP55808 180 aa5.68□□□□□ -1.5
LSAMP-201ENST00000333617 LINC00575Q6W349 94 aa5.68□□□□□ -1.5
LSAMP-201ENST00000333617 MT-ATP8P03928 68 aa5.67□□□□□ -1.5
LSAMP-201ENST00000333617 SCGB1A1P11684 91 aa5.67□□□□□ -1.5
LSAMP-201ENST00000333617 C9orf129Q5T035 196 aaKnown RBP5.67□□□□□ -1.5
LSAMP-201ENST00000333617 DIRC1Q969H9 104 aa5.67□□□□□ -1.5
LSAMP-201ENST00000333617 hADV29S1A0JD25 119 aa5.67□□□□□ -1.5
LSAMP-201ENST00000333617 NUPR2A6NF83 97 aa5.67□□□□□ -1.5
LSAMP-201ENST00000333617 TMEM256-PLSCR3K7ERE1 68 aa5.67□□□□□ -1.5
LSAMP-201ENST00000333617 ZNF73O43830 326 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-201ENST00000333617 ACYP1P07311 99 aa5.67□□□□□ -1.5
LSAMP-201ENST00000333617 HECTD4Q9Y4D8 3996 aa5.67□□□□□ -1.5
LSAMP-201ENST00000333617 COX7BP24311 80 aa5.66□□□□□ -1.5
LSAMP-201ENST00000333617 NKAPP1Q8N9T2 125 aa5.66□□□□□ -1.5
LSAMP-201ENST00000333617 OBSCN-AS1Q96MR7 158 aa5.66□□□□□ -1.5
LSAMP-201ENST00000333617 KRTAP1-5Q9BYS1 174 aa5.66□□□□□ -1.5
LSAMP-201ENST00000333617 TRBV7-6A0A0J9YX20 115 aa5.65□□□□□ -1.5
LSAMP-201ENST00000333617 PSCAO43653 123 aa5.65□□□□□ -1.5
LSAMP-201ENST00000333617 TGP01266 2768 aa5.65□□□□□ -1.5
LSAMP-201ENST00000333617 ELOF1P60002 83 aaKnown RBP5.64□□□□□ -1.51
LSAMP-201ENST00000333617 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
LSAMP-201ENST00000333617 SERTAD4-AS1Q5TG53 156 aa5.64□□□□□ -1.51
LSAMP-201ENST00000333617 LOC107984640A0A0U1RRK4 108 aa5.63□□□□□ -1.51
LSAMP-201ENST00000333617 JMJD7-PLA2G4BH0Y9G9 81 aa5.63□□□□□ -1.51
LSAMP-201ENST00000333617 H3BQ85 93 aa5.63□□□□□ -1.51
LSAMP-201ENST00000333617 GAGE2AQ6NT46 116 aa5.63□□□□□ -1.51
LSAMP-201ENST00000333617 C14orf132Q9NPU4 83 aa5.63□□□□□ -1.51
LSAMP-201ENST00000333617 GAGE2BQ13066 116 aa5.63□□□□□ -1.51
LSAMP-201ENST00000333617 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
LSAMP-201ENST00000333617 IGLV5-37A0A075B6J1 123 aa5.62□□□□□ -1.51
LSAMP-201ENST00000333617 A0A1B0GV72 72 aa5.62□□□□□ -1.51
LSAMP-201ENST00000333617 TTC32Q5I0X7 151 aa5.62□□□□□ -1.51
LSAMP-201ENST00000333617 Q6ZQY7 126 aa5.62□□□□□ -1.51
LSAMP-201ENST00000333617 DNAH6Q9C0G6 4158 aa5.61□□□□□ -1.51
LSAMP-201ENST00000333617 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
LSAMP-201ENST00000333617 C14orf177Q52M58 125 aa5.61□□□□□ -1.51
LSAMP-201ENST00000333617 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.61□□□□□ -1.51
LSAMP-201ENST00000333617 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
LSAMP-201ENST00000333617 NBDYA0A0U1RRE5 68 aa5.6□□□□□ -1.51
LSAMP-201ENST00000333617 CNBPP62633 177 aaKnown RBP5.6□□□□□ -1.51
LSAMP-201ENST00000333617 KMT2AQ03164 3969 aa5.6□□□□□ -1.51
LSAMP-201ENST00000333617 LAMTOR3Q9UHA4 124 aa5.59□□□□□ -1.51
LSAMP-201ENST00000333617 PRYO14603 147 aa5.59□□□□□ -1.52
LSAMP-201ENST00000333617 CCKP06307 115 aa5.59□□□□□ -1.52
LSAMP-201ENST00000333617 SDIM1Q6ZPB5 146 aa5.59□□□□□ -1.52
LSAMP-201ENST00000333617 FAM19A5Q7Z5A7 132 aaPredicted RBP5.59□□□□□ -1.52
LSAMP-201ENST00000333617 LINC00643Q86TS7 51 aa5.59□□□□□ -1.52
LSAMP-201ENST00000333617 SMCR5Q8TEV8 140 aa5.59□□□□□ -1.52
LSAMP-201ENST00000333617 IGLV1-50A0A075B6I6 118 aa5.58□□□□□ -1.52
LSAMP-201ENST00000333617 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
LSAMP-201ENST00000333617 RBM3P98179 157 aaKnown RBP5.58□□□□□ -1.52
LSAMP-201ENST00000333617 Q6Q795 121 aa5.58□□□□□ -1.52
LSAMP-201ENST00000333617 MRPL55Q7Z7F7 128 aaKnown RBP5.58□□□□□ -1.52
LSAMP-201ENST00000333617 DNAH2Q9P225 4427 aa5.57□□□□□ -1.52
LSAMP-201ENST00000333617 DNAH17Q9UFH2 4485 aa5.57□□□□□ -1.52
LSAMP-201ENST00000333617 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.57□□□□□ -1.52
LSAMP-201ENST00000333617 C16orf90A8MZG2 172 aa5.57□□□□□ -1.52
LSAMP-201ENST00000333617 KRTAP7-1Q8IUC3 87 aa5.57□□□□□ -1.52
LSAMP-201ENST00000333617 A0A096LNI7 61 aa5.56□□□□□ -1.52
LSAMP-201ENST00000333617 TRBV7-7A0A0K0K1E9 115 aa5.56□□□□□ -1.52
LSAMP-201ENST00000333617 LOC110117498A0A087WWA1 95 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 ETDCA0A1B0GVM5 59 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 LRCOL1A6NCL2 159 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 SPRR1AP35321 89 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 DSCR8Q96T75 97 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 LINC00846Q9NV44 126 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 IGKV2-24A0A0C4DH68 120 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 B5MCH6 92 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
LSAMP-201ENST00000333617 Q6ZQT0 140 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 Q6ZRN7 208 aaPredicted RBP5.55□□□□□ -1.52
LSAMP-201ENST00000333617 Q6ZRX8 168 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 IMUPQ9GZP8 106 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 DHRS4-AS1Q9P1J3 65 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 PKIGQ9Y2B9 76 aa5.55□□□□□ -1.52
LSAMP-201ENST00000333617 FRAS1Q86XX4 4008 aa5.54□□□□□ -1.52
LSAMP-201ENST00000333617 M0R2N4 97 aa5.54□□□□□ -1.52
LSAMP-201ENST00000333617 PDE6GP18545 87 aa5.54□□□□□ -1.52
LSAMP-201ENST00000333617 NDUFV3P56181 108 aaKnown RBP5.54□□□□□ -1.52
LSAMP-201ENST00000333617 REG3GQ6UW15 175 aa5.53□□□□□ -1.52
LSAMP-201ENST00000333617 C9orf163Q8N9P6 203 aa5.53□□□□□ -1.52
LSAMP-201ENST00000333617 A0A1W2PNN7 141 aa5.52□□□□□ -1.53
LSAMP-201ENST00000333617 Q9BRP9 147 aa5.52□□□□□ -1.53
LSAMP-201ENST00000333617 ALMS1Q8TCU4 4167 aa5.52□□□□□ -1.53
LSAMP-201ENST00000333617 TRBV7-4A0A0J9YYF1 115 aa5.51□□□□□ -1.53
LSAMP-201ENST00000333617 Q6JHZ5 121 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms