RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PDE6GP18545 87 aa7.35□□□□□ -1.23
TOP3A-201ENST00000321105 C2orf48Q96LS8 159 aa7.35□□□□□ -1.23
TOP3A-201ENST00000321105 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
TOP3A-201ENST00000321105 DNAH10OSP0CZ25 163 aa7.33□□□□□ -1.24
TOP3A-201ENST00000321105 PRR4Q16378 134 aa7.32□□□□□ -1.24
TOP3A-201ENST00000321105 REG3GQ6UW15 175 aa7.32□□□□□ -1.24
TOP3A-201ENST00000321105 SERTAD4-AS1Q5TG53 156 aa7.32□□□□□ -1.24
TOP3A-201ENST00000321105 ST20-AS1Q8NBB2 130 aa7.32□□□□□ -1.24
TOP3A-201ENST00000321105 NUPR2A6NF83 97 aa7.32□□□□□ -1.24
TOP3A-201ENST00000321105 DHRS4-AS1Q9P1J3 65 aa7.32□□□□□ -1.24
TOP3A-201ENST00000321105 FAM240AA0A1B0GVK7 77 aa7.32□□□□□ -1.24
TOP3A-201ENST00000321105 PRR34Q9NV39 138 aa7.31□□□□□ -1.24
TOP3A-201ENST00000321105 LINC01561Q8N1V8 128 aa7.31□□□□□ -1.24
TOP3A-201ENST00000321105 MUC7Q8TAX7 377 aa7.31□□□□□ -1.24
TOP3A-201ENST00000321105 TENM2Q9NT68 2774 aa7.3□□□□□ -1.24
TOP3A-201ENST00000321105 C15orf56Q8N910 161 aa7.3□□□□□ -1.24
TOP3A-201ENST00000321105 A0A0G2JQZ4 141 aa7.3□□□□□ -1.24
TOP3A-201ENST00000321105 A0A1W2PNN7 141 aa7.3□□□□□ -1.24
TOP3A-201ENST00000321105 PHF5AQ7RTV0 110 aaKnown RBP7.3□□□□□ -1.24
TOP3A-201ENST00000321105 A0A087WSZ3 146 aa7.29□□□□□ -1.24
TOP3A-201ENST00000321105 H3BNG1 76 aa7.29□□□□□ -1.24
TOP3A-201ENST00000321105 Q6ZVQ6 151 aa7.29□□□□□ -1.24
TOP3A-201ENST00000321105 UQCRQO14949 82 aa7.28□□□□□ -1.24
TOP3A-201ENST00000321105 VPREB1P12018 145 aa7.28□□□□□ -1.24
TOP3A-201ENST00000321105 H3BQ85 93 aa7.28□□□□□ -1.24
TOP3A-201ENST00000321105 NDUFB1O75438 58 aa7.28□□□□□ -1.24
TOP3A-201ENST00000321105 FAM19A3Q7Z5A8 133 aa7.27□□□□□ -1.25
TOP3A-201ENST00000321105 SMCR5Q8TEV8 140 aa7.27□□□□□ -1.25
TOP3A-201ENST00000321105 IGLV5-52A0A0A0MRZ9 124 aa7.26□□□□□ -1.25
TOP3A-201ENST00000321105 Q6JHZ5 121 aa7.26□□□□□ -1.25
TOP3A-201ENST00000321105 FAM30AQ9NZY2 134 aa7.26□□□□□ -1.25
TOP3A-201ENST00000321105 Q9BRP9 147 aa7.25□□□□□ -1.25
TOP3A-201ENST00000321105 IMUPQ9GZP8 106 aa7.25□□□□□ -1.25
TOP3A-201ENST00000321105 SERP2Q8N6R1 65 aa7.24□□□□□ -1.25
TOP3A-201ENST00000321105 LINC01547P58512 204 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-201ENST00000321105 Q8NDZ9 215 aa7.24□□□□□ -1.25
TOP3A-201ENST00000321105 C1orf134Q5TEV5 83 aa7.23□□□□□ -1.25
TOP3A-201ENST00000321105 TRRAPQ9Y4A5 3859 aa7.23□□□□□ -1.25
TOP3A-201ENST00000321105 GVQW2A0A096LPI5 108 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-201ENST00000321105 IGLV6-57P01721 117 aa7.23□□□□□ -1.25
TOP3A-201ENST00000321105 NBDYA0A0U1RRE5 68 aa7.23□□□□□ -1.25
TOP3A-201ENST00000321105 ELOF1P60002 83 aaKnown RBP7.23□□□□□ -1.25
TOP3A-201ENST00000321105 COX7CP15954 63 aa7.22□□□□□ -1.25
TOP3A-201ENST00000321105 PKIGQ9Y2B9 76 aa7.22□□□□□ -1.25
TOP3A-201ENST00000321105 ATP5EP2Q5VTU8 51 aa7.22□□□□□ -1.25
TOP3A-201ENST00000321105 CIRBP-AS1Q8TBR5 109 aa7.22□□□□□ -1.25
TOP3A-201ENST00000321105 TM2D3Q9BRN9 247 aa7.22□□□□□ -1.25
TOP3A-201ENST00000321105 MP68P56378 58 aa7.21□□□□□ -1.26
TOP3A-201ENST00000321105 C4orf48Q5BLP8 95 aa7.21□□□□□ -1.26
TOP3A-201ENST00000321105 IGKV4-1P06312 121 aa7.2□□□□□ -1.26
TOP3A-201ENST00000321105 Q6Q795 121 aa7.2□□□□□ -1.26
TOP3A-201ENST00000321105 PRYO14603 147 aa7.19□□□□□ -1.26
TOP3A-201ENST00000321105 Q6ZRX8 168 aa7.19□□□□□ -1.26
TOP3A-201ENST00000321105 TGP01266 2768 aa7.19□□□□□ -1.26
TOP3A-201ENST00000321105 LINC00474Q9P2X8 69 aa7.19□□□□□ -1.26
TOP3A-201ENST00000321105 Q6ZQT0 140 aa7.18□□□□□ -1.26
TOP3A-201ENST00000321105 NHLRC4P0CG21 123 aaPredicted RBP7.18□□□□□ -1.26
TOP3A-201ENST00000321105 MPLKIPQ8TAP9 179 aa7.17□□□□□ -1.26
TOP3A-201ENST00000321105 EPM2AB3EWF7 344 aa7.17□□□□□ -1.26
TOP3A-201ENST00000321105 ERC2-IT1O76042 136 aa7.16□□□□□ -1.26
TOP3A-201ENST00000321105 TRBV7-7A0A0K0K1E9 115 aa7.16□□□□□ -1.26
TOP3A-201ENST00000321105 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
TOP3A-201ENST00000321105 ANAPC11Q9NYG5 84 aa7.15□□□□□ -1.26
TOP3A-201ENST00000321105 C16orf90A8MZG2 172 aa7.15□□□□□ -1.27
TOP3A-201ENST00000321105 LINC00476Q8WZB0 136 aa7.14□□□□□ -1.27
TOP3A-201ENST00000321105 IGHV6-1A0A0B4J1U7 121 aa7.13□□□□□ -1.27
TOP3A-201ENST00000321105 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
TOP3A-201ENST00000321105 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
TOP3A-201ENST00000321105 ZNF469Q96JG9 3925 aaPredicted RBP7.13□□□□□ -1.27
TOP3A-201ENST00000321105 J3KT08 172 aa7.13□□□□□ -1.27
TOP3A-201ENST00000321105 RTL8CO15255 209 aa7.13□□□□□ -1.27
TOP3A-201ENST00000321105 FAM236DA0A1B0GTK5 79 aa7.13□□□□□ -1.27
TOP3A-201ENST00000321105 FAM236CP0DP71 79 aa7.13□□□□□ -1.27
TOP3A-201ENST00000321105 IGLV1-50A0A075B6I6 118 aa7.12□□□□□ -1.27
TOP3A-201ENST00000321105 WIPF1O43516 503 aa7.12□□□□□ -1.27
TOP3A-201ENST00000321105 MOBPQ13875 183 aa7.12□□□□□ -1.27
TOP3A-201ENST00000321105 C5orf47Q569G3 176 aa7.11□□□□□ -1.27
TOP3A-201ENST00000321105 Q8N377 158 aa7.11□□□□□ -1.27
TOP3A-201ENST00000321105 LINC00208Q96KT6 92 aa7.11□□□□□ -1.27
TOP3A-201ENST00000321105 F8WDY8 70 aa7.11□□□□□ -1.27
TOP3A-201ENST00000321105 KCNQ1DNQ9H478 68 aa7.11□□□□□ -1.27
TOP3A-201ENST00000321105 KRTAP1-5Q9BYS1 174 aa7.1□□□□□ -1.27
TOP3A-201ENST00000321105 SMIM29Q86T20 159 aa7.1□□□□□ -1.27
TOP3A-201ENST00000321105 DMBT1Q9UGM3 2413 aaPredicted RBP7.1□□□□□ -1.27
TOP3A-201ENST00000321105 APLNQ9ULZ1 77 aa7.09□□□□□ -1.27
TOP3A-201ENST00000321105 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
TOP3A-201ENST00000321105 Q8NBF4 154 aa7.07□□□□□ -1.28
TOP3A-201ENST00000321105 SRRM2Q9UQ35 2752 aaKnown RBP7.07□□□□□ -1.28
TOP3A-201ENST00000321105 PCOTHQ58A44 107 aa7.07□□□□□ -1.28
TOP3A-201ENST00000321105 ZNF706Q9Y5V0 76 aaPredicted RBP7.06□□□□□ -1.28
TOP3A-201ENST00000321105 CASC2Q6XLA1 102 aa7.06□□□□□ -1.28
TOP3A-201ENST00000321105 TMEM254Q8TBM7 123 aa7.05□□□□□ -1.28
TOP3A-201ENST00000321105 LOC110117498A0A087WWA1 95 aa7.05□□□□□ -1.28
TOP3A-201ENST00000321105 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
TOP3A-201ENST00000321105 C9orf163Q8N9P6 203 aa7.05□□□□□ -1.28
TOP3A-201ENST00000321105 TMEM258P61165 79 aa7.04□□□□□ -1.28
TOP3A-201ENST00000321105 A0A087WTM6 91 aa7.04□□□□□ -1.28
TOP3A-201ENST00000321105 K7EQZ3 153 aa7.03□□□□□ -1.28
TOP3A-201ENST00000321105 CXCL6P80162 114 aa7.03□□□□□ -1.28
TOP3A-201ENST00000321105 SVIPQ8NHG7 77 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms