RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 IGLV1-50A0A075B6I6 118 aa10.92□□□□□ -0.66
SSR4-201ENST00000320857 FAM19A5Q7Z5A7 132 aaPredicted RBP10.92□□□□□ -0.66
SSR4-201ENST00000320857 C16orf90A8MZG2 172 aa10.91□□□□□ -0.66
SSR4-201ENST00000320857 MRPL55Q7Z7F7 128 aaKnown RBP10.91□□□□□ -0.66
SSR4-201ENST00000320857 A0A1B0GV72 72 aa10.9□□□□□ -0.66
SSR4-201ENST00000320857 KRTAP7-1Q8IUC3 87 aa10.9□□□□□ -0.66
SSR4-201ENST00000320857 LAMTOR3Q9UHA4 124 aa10.9□□□□□ -0.66
SSR4-201ENST00000320857 PKIGQ9Y2B9 76 aa10.9□□□□□ -0.66
SSR4-201ENST00000320857 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.89□□□□□ -0.67
SSR4-201ENST00000320857 LRCOL1A6NCL2 159 aa10.89□□□□□ -0.67
SSR4-201ENST00000320857 RPL37AP8A6NKH3 93 aa10.89□□□□□ -0.67
SSR4-201ENST00000320857 CCKP06307 115 aa10.89□□□□□ -0.67
SSR4-201ENST00000320857 VPS13DQ5THJ4 4388 aa10.88□□□□□ -0.67
SSR4-201ENST00000320857 A0A096LNI7 61 aa10.88□□□□□ -0.67
SSR4-201ENST00000320857 RBM3P98179 157 aaKnown RBP10.88□□□□□ -0.67
SSR4-201ENST00000320857 C21orf62-AS1Q17RA5 79 aa10.88□□□□□ -0.67
SSR4-201ENST00000320857 SDIM1Q6ZPB5 146 aa10.88□□□□□ -0.67
SSR4-201ENST00000320857 Q6ZRN7 208 aaPredicted RBP10.88□□□□□ -0.67
SSR4-201ENST00000320857 TENM2Q9NT68 2774 aa10.88□□□□□ -0.67
SSR4-201ENST00000320857 LINC00643Q86TS7 51 aa10.87□□□□□ -0.67
SSR4-201ENST00000320857 ETDCA0A1B0GVM5 59 aa10.86□□□□□ -0.67
SSR4-201ENST00000320857 SPRR1AP35321 89 aa10.86□□□□□ -0.67
SSR4-201ENST00000320857 IGKV2-24A0A0C4DH68 120 aa10.85□□□□□ -0.67
SSR4-201ENST00000320857 Q6Q795 121 aa10.85□□□□□ -0.67
SSR4-201ENST00000320857 DHRS4-AS1Q9P1J3 65 aa10.85□□□□□ -0.67
SSR4-201ENST00000320857 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
SSR4-201ENST00000320857 SMCR5Q8TEV8 140 aa10.85□□□□□ -0.67
SSR4-201ENST00000320857 B5MCH6 92 aa10.84□□□□□ -0.67
SSR4-201ENST00000320857 KRTAP4-16G5E9R7 235 aaPredicted RBP10.84□□□□□ -0.67
SSR4-201ENST00000320857 M0R2N4 97 aa10.84□□□□□ -0.67
SSR4-201ENST00000320857 Q6ZRX8 168 aa10.84□□□□□ -0.67
SSR4-201ENST00000320857 LOC110117498A0A087WWA1 95 aa10.83□□□□□ -0.68
SSR4-201ENST00000320857 C9orf163Q8N9P6 203 aa10.83□□□□□ -0.68
SSR4-201ENST00000320857 PDE6GP18545 87 aa10.82□□□□□ -0.68
SSR4-201ENST00000320857 DSCR8Q96T75 97 aa10.82□□□□□ -0.68
SSR4-201ENST00000320857 TRBV7-7A0A0K0K1E9 115 aa10.81□□□□□ -0.68
SSR4-201ENST00000320857 REG3GQ6UW15 175 aa10.81□□□□□ -0.68
SSR4-201ENST00000320857 A0A1W2PNN7 141 aa10.8□□□□□ -0.68
SSR4-201ENST00000320857 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
SSR4-201ENST00000320857 Q6ZQT0 140 aa10.8□□□□□ -0.68
SSR4-201ENST00000320857 LINC00846Q9NV44 126 aa10.8□□□□□ -0.68
SSR4-201ENST00000320857 Q6ZR54 194 aa10.79□□□□□ -0.68
SSR4-201ENST00000320857 IMUPQ9GZP8 106 aa10.79□□□□□ -0.68
SSR4-201ENST00000320857 LINC00474Q9P2X8 69 aa10.79□□□□□ -0.68
SSR4-201ENST00000320857 LY6G6CO95867 125 aa10.78□□□□□ -0.68
SSR4-201ENST00000320857 Q9BRP9 147 aa10.77□□□□□ -0.69
SSR4-201ENST00000320857 A0A087WTM6 91 aa10.76□□□□□ -0.69
SSR4-201ENST00000320857 CHTF8P0CG12 524 aa10.76□□□□□ -0.69
SSR4-201ENST00000320857 TRBV7-4A0A0J9YYF1 115 aa10.75□□□□□ -0.69
SSR4-201ENST00000320857 Q6JHZ5 121 aa10.75□□□□□ -0.69
SSR4-201ENST00000320857 UBE2BP63146 152 aa10.74□□□□□ -0.69
SSR4-201ENST00000320857 ALMS1Q8TCU4 4167 aa10.74□□□□□ -0.69
SSR4-201ENST00000320857 Q8N377 158 aa10.73□□□□□ -0.69
SSR4-201ENST00000320857 DEFB105AQ8NG35 78 aa10.73□□□□□ -0.69
SSR4-201ENST00000320857 LINC00476Q8WZB0 136 aa10.73□□□□□ -0.69
SSR4-201ENST00000320857 LINC01547P58512 204 aaPredicted RBP10.71□□□□□ -0.69
SSR4-201ENST00000320857 UBL5Q9BZL1 73 aa10.71□□□□□ -0.69
SSR4-201ENST00000320857 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
SSR4-201ENST00000320857 PHF5AQ7RTV0 110 aaKnown RBP10.7□□□□□ -0.7
SSR4-201ENST00000320857 FAM19A1Q7Z5A9 133 aa10.7□□□□□ -0.7
SSR4-201ENST00000320857 C1orf134Q5TEV5 83 aa10.69□□□□□ -0.7
SSR4-201ENST00000320857 HYDINQ4G0P3 5121 aa10.69□□□□□ -0.7
SSR4-201ENST00000320857 KMT2CQ8NEZ4 4911 aaKnown RBP10.69□□□□□ -0.7
SSR4-201ENST00000320857 LCE6AA0A183 80 aa10.69□□□□□ -0.7
SSR4-201ENST00000320857 ATP5EP2Q5VTU8 51 aa10.69□□□□□ -0.7
SSR4-201ENST00000320857 SACSQ9NZJ4 4579 aa10.68□□□□□ -0.7
SSR4-201ENST00000320857 ERC2-IT1O76042 136 aa10.68□□□□□ -0.7
SSR4-201ENST00000320857 ST20-AS1Q8NBB2 130 aa10.67□□□□□ -0.7
SSR4-201ENST00000320857 DPH3Q96FX2 82 aa10.67□□□□□ -0.7
SSR4-201ENST00000320857 IGKV3D-7A0A0C4DH55 119 aa10.66□□□□□ -0.7
SSR4-201ENST00000320857 ANAPC13Q9BS18 74 aa10.66□□□□□ -0.7
SSR4-201ENST00000320857 RTL8CO15255 209 aa10.65□□□□□ -0.7
SSR4-201ENST00000320857 SPACA4Q8TDM5 124 aa10.65□□□□□ -0.7
SSR4-201ENST00000320857 KMT2AQ03164 3969 aa10.65□□□□□ -0.7
SSR4-201ENST00000320857 DNAH6Q9C0G6 4158 aa10.65□□□□□ -0.71
SSR4-201ENST00000320857 PRLHP81277 87 aa10.64□□□□□ -0.71
SSR4-201ENST00000320857 RYR2Q92736 4967 aa10.64□□□□□ -0.71
SSR4-201ENST00000320857 H0Y9J4 135 aa10.63□□□□□ -0.71
SSR4-201ENST00000320857 PANO1I0J062 215 aa10.63□□□□□ -0.71
SSR4-201ENST00000320857 EPM2AB3EWF7 344 aa10.62□□□□□ -0.71
SSR4-201ENST00000320857 KRTAP11-1Q8IUC1 163 aa10.62□□□□□ -0.71
SSR4-201ENST00000320857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.62□□□□□ -0.71
SSR4-201ENST00000320857 DNAH2Q9P225 4427 aa10.61□□□□□ -0.71
SSR4-201ENST00000320857 FAM236AA0A1B0GUQ0 79 aa10.61□□□□□ -0.71
SSR4-201ENST00000320857 FAM236BA0A1B0GV22 79 aa10.61□□□□□ -0.71
SSR4-201ENST00000320857 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
SSR4-201ENST00000320857 TNP2Q05952 138 aa10.6□□□□□ -0.71
SSR4-201ENST00000320857 Q6ZVQ6 151 aa10.6□□□□□ -0.71
SSR4-201ENST00000320857 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
SSR4-201ENST00000320857 IGLV5-52A0A0A0MRZ9 124 aa10.59□□□□□ -0.71
SSR4-201ENST00000320857 UBE2AP49459 152 aa10.59□□□□□ -0.71
SSR4-201ENST00000320857 BCE1O60756 84 aa10.58□□□□□ -0.72
SSR4-201ENST00000320857 RYR3Q15413 4870 aa10.58□□□□□ -0.72
SSR4-201ENST00000320857 F8WEM9 126 aa10.57□□□□□ -0.72
SSR4-201ENST00000320857 DNAH17Q9UFH2 4485 aa10.57□□□□□ -0.72
SSR4-201ENST00000320857 A0A1B0GW54 56 aa10.57□□□□□ -0.72
SSR4-201ENST00000320857 FUSP35637 526 aaKnown RBP eCLIP10.57□□□□□ -0.72
SSR4-201ENST00000320857 C1orf137Q5JT78 98 aa10.57□□□□□ -0.72
SSR4-201ENST00000320857 SMIM29Q86T20 159 aa10.56□□□□□ -0.72
SSR4-201ENST00000320857 HIST1H4AP62805 103 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms