RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 LINC00846Q9NV44 126 aa4.9□□□□□ -1.62
IFT88-201ENST00000319980 DNAH9Q9NYC9 4486 aa4.9□□□□□ -1.63
IFT88-201ENST00000319980 TRBV7-6A0A0J9YX20 115 aa4.9□□□□□ -1.63
IFT88-201ENST00000319980 RPL37AP8A6NKH3 93 aa4.9□□□□□ -1.63
IFT88-201ENST00000319980 CCKP06307 115 aa4.9□□□□□ -1.63
IFT88-201ENST00000319980 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
IFT88-201ENST00000319980 Q6Q795 121 aa4.89□□□□□ -1.63
IFT88-201ENST00000319980 C5orf47Q569G3 176 aa4.89□□□□□ -1.63
IFT88-201ENST00000319980 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.88□□□□□ -1.63
IFT88-201ENST00000319980 KCNQ1DNQ9H478 68 aa4.88□□□□□ -1.63
IFT88-201ENST00000319980 TRBV7-7A0A0K0K1E9 115 aa4.88□□□□□ -1.63
IFT88-201ENST00000319980 FAM19A5Q7Z5A7 132 aaPredicted RBP4.88□□□□□ -1.63
IFT88-201ENST00000319980 LOC107984640A0A0U1RRK4 108 aa4.88□□□□□ -1.63
IFT88-201ENST00000319980 NHLRC4P0CG21 123 aaPredicted RBP4.88□□□□□ -1.63
IFT88-201ENST00000319980 KRTAP7-1Q8IUC3 87 aa4.88□□□□□ -1.63
IFT88-201ENST00000319980 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
IFT88-201ENST00000319980 CSMD3Q7Z407 3707 aa4.88□□□□□ -1.63
IFT88-201ENST00000319980 DNAH1Q9P2D7 4330 aa4.87□□□□□ -1.63
IFT88-201ENST00000319980 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.87□□□□□ -1.63
IFT88-201ENST00000319980 NDUFV3P56181 108 aaKnown RBP4.87□□□□□ -1.63
IFT88-201ENST00000319980 NUPR2A6NF83 97 aa4.87□□□□□ -1.63
IFT88-201ENST00000319980 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
IFT88-201ENST00000319980 IGLV1-50A0A075B6I6 118 aa4.86□□□□□ -1.63
IFT88-201ENST00000319980 IGKV2-24A0A0C4DH68 120 aa4.86□□□□□ -1.63
IFT88-201ENST00000319980 H3BQ85 93 aa4.86□□□□□ -1.63
IFT88-201ENST00000319980 IMUPQ9GZP8 106 aa4.86□□□□□ -1.63
IFT88-201ENST00000319980 Q6ZQT0 140 aa4.86□□□□□ -1.63
IFT88-201ENST00000319980 MRPL55Q7Z7F7 128 aaKnown RBP4.86□□□□□ -1.63
IFT88-201ENST00000319980 IGLV5-37A0A075B6J1 123 aa4.85□□□□□ -1.63
IFT88-201ENST00000319980 IGKV3D-7A0A0C4DH55 119 aa4.85□□□□□ -1.63
IFT88-201ENST00000319980 DEFB105AQ8NG35 78 aa4.85□□□□□ -1.63
IFT88-201ENST00000319980 A0A096LNI7 61 aa4.85□□□□□ -1.63
IFT88-201ENST00000319980 NBDYA0A0U1RRE5 68 aa4.84□□□□□ -1.63
IFT88-201ENST00000319980 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
IFT88-201ENST00000319980 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
IFT88-201ENST00000319980 M0R2N4 97 aa4.84□□□□□ -1.63
IFT88-201ENST00000319980 CNBPP62633 177 aaKnown RBP4.84□□□□□ -1.63
IFT88-201ENST00000319980 DNAH10Q8IVF4 4471 aa4.84□□□□□ -1.63
IFT88-201ENST00000319980 LOC110117498A0A087WWA1 95 aa4.84□□□□□ -1.63
IFT88-201ENST00000319980 ETDCA0A1B0GVM5 59 aa4.84□□□□□ -1.63
IFT88-201ENST00000319980 Q6ZRX8 168 aa4.84□□□□□ -1.63
IFT88-201ENST00000319980 DNAH7Q8WXX0 4024 aa4.84□□□□□ -1.64
IFT88-201ENST00000319980 C16orf90A8MZG2 172 aa4.83□□□□□ -1.64
IFT88-201ENST00000319980 KRTAP4-16G5E9R7 235 aaPredicted RBP4.83□□□□□ -1.64
IFT88-201ENST00000319980 SPRR1AP35321 89 aa4.83□□□□□ -1.64
IFT88-201ENST00000319980 C14orf177Q52M58 125 aa4.83□□□□□ -1.64
IFT88-201ENST00000319980 Q9BRP9 147 aa4.83□□□□□ -1.64
IFT88-201ENST00000319980 UBL5Q9BZL1 73 aa4.83□□□□□ -1.64
IFT88-201ENST00000319980 DYNC2H1Q8NCM8 4307 aaKnown RBP4.82□□□□□ -1.64
IFT88-201ENST00000319980 A0A1W2PNN7 141 aa4.82□□□□□ -1.64
IFT88-201ENST00000319980 PDE6GP18545 87 aa4.82□□□□□ -1.64
IFT88-201ENST00000319980 Q6JHZ5 121 aa4.82□□□□□ -1.64
IFT88-201ENST00000319980 TRBV7-4A0A0J9YYF1 115 aa4.82□□□□□ -1.64
IFT88-201ENST00000319980 DHRS4-AS1Q9P1J3 65 aa4.82□□□□□ -1.64
IFT88-201ENST00000319980 CHTF8P0CG12 524 aa4.81□□□□□ -1.64
IFT88-201ENST00000319980 Q8N377 158 aa4.81□□□□□ -1.64
IFT88-201ENST00000319980 LRCOL1A6NCL2 159 aa4.81□□□□□ -1.64
IFT88-201ENST00000319980 REG3GQ6UW15 175 aa4.81□□□□□ -1.64
IFT88-201ENST00000319980 A0A087WVE0 104 aa4.81□□□□□ -1.64
IFT88-201ENST00000319980 UBE2BP63146 152 aa4.81□□□□□ -1.64
IFT88-201ENST00000319980 C3orf22Q8N5N4 141 aa4.81□□□□□ -1.64
IFT88-201ENST00000319980 HIST1H4AP62805 103 aaKnown RBP4.8□□□□□ -1.64
IFT88-201ENST00000319980 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
IFT88-201ENST00000319980 ERC2-IT1O76042 136 aa4.8□□□□□ -1.64
IFT88-201ENST00000319980 Q6ZRN7 208 aaPredicted RBP4.8□□□□□ -1.64
IFT88-201ENST00000319980 PLECQ15149 4684 aaKnown RBP4.8□□□□□ -1.64
IFT88-201ENST00000319980 LINC01547P58512 204 aaPredicted RBP4.79□□□□□ -1.64
IFT88-201ENST00000319980 C9orf163Q8N9P6 203 aa4.79□□□□□ -1.64
IFT88-201ENST00000319980 WWC2-AS2Q96NR7 200 aa4.79□□□□□ -1.64
IFT88-201ENST00000319980 CCDC179H3BU77 68 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 HAMPP81172 84 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 Q6ZVQ6 151 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 C3orf84H3BNL1 204 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 PRLHP81277 87 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 V9GYY9 64 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 ATP5EP2Q5VTU8 51 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 PHF5AQ7RTV0 110 aaKnown RBP4.78□□□□□ -1.64
IFT88-201ENST00000319980 FAM19A1Q7Z5A9 133 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 DPH3Q96FX2 82 aa4.78□□□□□ -1.64
IFT88-201ENST00000319980 STARD9Q9P2P6 4700 aa4.77□□□□□ -1.65
IFT88-201ENST00000319980 IGLV5-48A0A075B6I7 105 aa4.76□□□□□ -1.65
IFT88-201ENST00000319980 KRTAP11-1Q8IUC1 163 aa4.76□□□□□ -1.65
IFT88-201ENST00000319980 HIGD2AQ9BW72 106 aa4.76□□□□□ -1.65
IFT88-201ENST00000319980 PANO1I0J062 215 aa4.76□□□□□ -1.65
IFT88-201ENST00000319980 FUSP35637 526 aaKnown RBP eCLIP4.76□□□□□ -1.65
IFT88-201ENST00000319980 A0A087WTM6 91 aa4.75□□□□□ -1.65
IFT88-201ENST00000319980 PRR26Q8N8Z3 221 aa4.75□□□□□ -1.65
IFT88-201ENST00000319980 LINC00474Q9P2X8 69 aa4.75□□□□□ -1.65
IFT88-201ENST00000319980 ATOX1O00244 68 aa4.74□□□□□ -1.65
IFT88-201ENST00000319980 SCXQ7RTU7 201 aa4.74□□□□□ -1.65
IFT88-201ENST00000319980 C1orf137Q5JT78 98 aa4.74□□□□□ -1.65
IFT88-201ENST00000319980 TGP01266 2768 aa4.74□□□□□ -1.65
IFT88-201ENST00000319980 Q75L30 129 aa4.74□□□□□ -1.65
IFT88-201ENST00000319980 PKIGQ9Y2B9 76 aa4.74□□□□□ -1.65
IFT88-201ENST00000319980 ALMS1Q8TCU4 4167 aa4.73□□□□□ -1.65
IFT88-201ENST00000319980 NREPQ16612 68 aa4.73□□□□□ -1.65
IFT88-201ENST00000319980 Q6ZR54 194 aa4.73□□□□□ -1.65
IFT88-201ENST00000319980 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.73□□□□□ -1.65
IFT88-201ENST00000319980 KMT2AQ03164 3969 aa4.73□□□□□ -1.65
IFT88-201ENST00000319980 SRRM2Q9UQ35 2752 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms