RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 BRK1Q8WUW1 75 aa10.39□□□□□ -0.75
SHROOM1-201ENST00000319854 ESRGQ1W209 222 aa10.38□□□□□ -0.75
SHROOM1-201ENST00000319854 BCE1O60756 84 aa10.37□□□□□ -0.75
SHROOM1-201ENST00000319854 Q6ZQY7 126 aa10.37□□□□□ -0.75
SHROOM1-201ENST00000319854 DEFB131BA0A096LNP1 70 aa10.37□□□□□ -0.75
SHROOM1-201ENST00000319854 SMIM26A0A096LP01 95 aa10.36□□□□□ -0.75
SHROOM1-201ENST00000319854 CMYA5Q8N3K9 4069 aa10.36□□□□□ -0.75
SHROOM1-201ENST00000319854 TRBV7-6A0A0J9YX20 115 aa10.36□□□□□ -0.75
SHROOM1-201ENST00000319854 C1orf195Q5TG92 126 aa10.36□□□□□ -0.75
SHROOM1-201ENST00000319854 C11orf45Q8TAV5 145 aa10.36□□□□□ -0.75
SHROOM1-201ENST00000319854 PRR34Q9NV39 138 aa10.36□□□□□ -0.75
SHROOM1-201ENST00000319854 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
SHROOM1-201ENST00000319854 TRBV7-4A0A0J9YYF1 115 aa10.34□□□□□ -0.75
SHROOM1-201ENST00000319854 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
SHROOM1-201ENST00000319854 CAMK2N2Q96S95 79 aa10.34□□□□□ -0.75
SHROOM1-201ENST00000319854 COX17Q14061 63 aa10.33□□□□□ -0.76
SHROOM1-201ENST00000319854 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
SHROOM1-201ENST00000319854 FAM229BQ4G0N7 80 aa10.33□□□□□ -0.76
SHROOM1-201ENST00000319854 CXCL6P80162 114 aa10.32□□□□□ -0.76
SHROOM1-201ENST00000319854 Q8N9L7 120 aa10.31□□□□□ -0.76
SHROOM1-201ENST00000319854 Q6ZRU5 148 aa10.29□□□□□ -0.76
SHROOM1-201ENST00000319854 IGLV6-57P01721 117 aa10.28□□□□□ -0.76
SHROOM1-201ENST00000319854 EGFEM1PQ0D2K5 195 aa10.28□□□□□ -0.76
SHROOM1-201ENST00000319854 NREPQ16612 68 aa10.28□□□□□ -0.76
SHROOM1-201ENST00000319854 COL7A1Q02388 2944 aa10.28□□□□□ -0.76
SHROOM1-201ENST00000319854 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
SHROOM1-201ENST00000319854 MPLKIPQ8TAP9 179 aa10.27□□□□□ -0.77
SHROOM1-201ENST00000319854 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
SHROOM1-201ENST00000319854 BPY2O14599 106 aa10.26□□□□□ -0.77
SHROOM1-201ENST00000319854 LYSTQ99698 3801 aa10.25□□□□□ -0.77
SHROOM1-201ENST00000319854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
SHROOM1-201ENST00000319854 C15orf56Q8N910 161 aa10.24□□□□□ -0.77
SHROOM1-201ENST00000319854 NDUFC1O43677 76 aa10.24□□□□□ -0.77
SHROOM1-201ENST00000319854 PDE6GP18545 87 aa10.23□□□□□ -0.77
SHROOM1-201ENST00000319854 CASC10Q5T4H9 136 aa10.21□□□□□ -0.77
SHROOM1-201ENST00000319854 KRTAP26-1Q6PEX3 210 aa10.21□□□□□ -0.77
SHROOM1-201ENST00000319854 H3BNG1 76 aa10.19□□□□□ -0.78
SHROOM1-201ENST00000319854 Q6ZRP5 223 aa10.19□□□□□ -0.78
SHROOM1-201ENST00000319854 DIRC1Q969H9 104 aa10.19□□□□□ -0.78
SHROOM1-201ENST00000319854 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
SHROOM1-201ENST00000319854 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
SHROOM1-201ENST00000319854 K7EIL1 84 aa10.18□□□□□ -0.78
SHROOM1-201ENST00000319854 OCR1Q9BZK8 76 aa10.18□□□□□ -0.78
SHROOM1-201ENST00000319854 LINC00588Q9Y4M8 146 aa10.18□□□□□ -0.78
SHROOM1-201ENST00000319854 LINC01556Q5JQF7 62 aa10.17□□□□□ -0.78
SHROOM1-201ENST00000319854 HIGD2AQ9BW72 106 aa10.17□□□□□ -0.78
SHROOM1-201ENST00000319854 ATP5EP56381 51 aaPredicted RBP10.17□□□□□ -0.78
SHROOM1-201ENST00000319854 COX7BP24311 80 aa10.16□□□□□ -0.78
SHROOM1-201ENST00000319854 SYCNQ0VAF6 134 aa10.16□□□□□ -0.78
SHROOM1-201ENST00000319854 PRYO14603 147 aa10.16□□□□□ -0.78
SHROOM1-201ENST00000319854 GVQW2A0A096LPI5 108 aaPredicted RBP10.15□□□□□ -0.78
SHROOM1-201ENST00000319854 VPREB1P12018 145 aa10.14□□□□□ -0.79
SHROOM1-201ENST00000319854 ELOF1P60002 83 aaKnown RBP10.14□□□□□ -0.79
SHROOM1-201ENST00000319854 DNAH3Q8TD57 4116 aa10.14□□□□□ -0.79
SHROOM1-201ENST00000319854 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
SHROOM1-201ENST00000319854 HUWE1Q7Z6Z7 4374 aaKnown RBP10.13□□□□□ -0.79
SHROOM1-201ENST00000319854 RPL37AP8A6NKH3 93 aa10.13□□□□□ -0.79
SHROOM1-201ENST00000319854 C3orf84H3BNL1 204 aa10.13□□□□□ -0.79
SHROOM1-201ENST00000319854 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.79
SHROOM1-201ENST00000319854 DEFB105AQ8NG35 78 aa10.13□□□□□ -0.79
SHROOM1-201ENST00000319854 FAM168BA1KXE4 195 aa10.12□□□□□ -0.79
SHROOM1-201ENST00000319854 LRCOL1A6NCL2 159 aa10.12□□□□□ -0.79
SHROOM1-201ENST00000319854 H3BQ85 93 aa10.12□□□□□ -0.79
SHROOM1-201ENST00000319854 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
SHROOM1-201ENST00000319854 NKAPP1Q8N9T2 125 aa10.1□□□□□ -0.79
SHROOM1-201ENST00000319854 DNAH10Q8IVF4 4471 aa10.09□□□□□ -0.79
SHROOM1-201ENST00000319854 M0R378 163 aa10.09□□□□□ -0.79
SHROOM1-201ENST00000319854 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
SHROOM1-201ENST00000319854 FAM30AQ9NZY2 134 aa10.08□□□□□ -0.8
SHROOM1-201ENST00000319854 LINC00528Q8N1L1 170 aa10.07□□□□□ -0.8
SHROOM1-201ENST00000319854 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
SHROOM1-201ENST00000319854 SMIM29Q86T20 159 aa10.06□□□□□ -0.8
SHROOM1-201ENST00000319854 PMAIP1Q13794 54 aa10.05□□□□□ -0.8
SHROOM1-201ENST00000319854 C7orf33Q8WU49 177 aa10.04□□□□□ -0.8
SHROOM1-201ENST00000319854 MDFIQ99750 246 aa10.02□□□□□ -0.8
SHROOM1-201ENST00000319854 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
SHROOM1-201ENST00000319854 hDV103S1A0JD37 113 aa10.02□□□□□ -0.81
SHROOM1-201ENST00000319854 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.01□□□□□ -0.81
SHROOM1-201ENST00000319854 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
SHROOM1-201ENST00000319854 KRTAP1-5Q9BYS1 174 aa10□□□□□ -0.81
SHROOM1-201ENST00000319854 Q8N377 158 aa9.99□□□□□ -0.81
SHROOM1-201ENST00000319854 C1orf64Q8NEQ6 169 aa9.99□□□□□ -0.81
SHROOM1-201ENST00000319854 PSCAO43653 123 aa9.99□□□□□ -0.81
SHROOM1-201ENST00000319854 DNAH7Q8WXX0 4024 aa9.98□□□□□ -0.81
SHROOM1-201ENST00000319854 PRR4Q16378 134 aa9.96□□□□□ -0.82
SHROOM1-201ENST00000319854 A0A1W2PNM2 257 aa9.96□□□□□ -0.82
SHROOM1-201ENST00000319854 PSPHP1O15172 72 aa9.95□□□□□ -0.82
SHROOM1-201ENST00000319854 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
SHROOM1-201ENST00000319854 DNAH9Q9NYC9 4486 aa9.94□□□□□ -0.82
SHROOM1-201ENST00000319854 LCE6AA0A183 80 aa9.94□□□□□ -0.82
SHROOM1-201ENST00000319854 ETDCA0A1B0GVM5 59 aa9.93□□□□□ -0.82
SHROOM1-201ENST00000319854 KRTAP7-1Q8IUC3 87 aa9.93□□□□□ -0.82
SHROOM1-201ENST00000319854 IGLV5-48A0A075B6I7 105 aa9.92□□□□□ -0.82
SHROOM1-201ENST00000319854 ZCCHC13Q8WW36 166 aaKnown RBP9.92□□□□□ -0.82
SHROOM1-201ENST00000319854 TGP01266 2768 aa9.92□□□□□ -0.82
SHROOM1-201ENST00000319854 UBE2BP63146 152 aa9.91□□□□□ -0.82
SHROOM1-201ENST00000319854 Q1T7F1 81 aa9.91□□□□□ -0.82
SHROOM1-201ENST00000319854 KCNQ1DNQ9H478 68 aa9.91□□□□□ -0.82
SHROOM1-201ENST00000319854 A0A0G2JQZ4 141 aa9.9□□□□□ -0.82
SHROOM1-201ENST00000319854 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms