RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ELOF1P60002 83 aaKnown RBP4.22□□□□□ -1.73
USP47-201ENST00000305481 V9GYY9 64 aa4.22□□□□□ -1.73
USP47-201ENST00000305481 A0A0U1RQV1 116 aa4.22□□□□□ -1.73
USP47-201ENST00000305481 INAFM2P0DMQ5 153 aa4.22□□□□□ -1.73
USP47-201ENST00000305481 C7orf33Q8WU49 177 aa4.22□□□□□ -1.73
USP47-201ENST00000305481 TMEM256-PLSCR3K7ERE1 68 aa4.22□□□□□ -1.73
USP47-201ENST00000305481 SMCR5Q8TEV8 140 aa4.22□□□□□ -1.73
USP47-201ENST00000305481 PLA2G2DQ9UNK4 145 aa4.22□□□□□ -1.73
USP47-201ENST00000305481 TRBV7-6A0A0J9YX20 115 aa4.21□□□□□ -1.74
USP47-201ENST00000305481 NUPR2A6NF83 97 aa4.21□□□□□ -1.74
USP47-201ENST00000305481 SNCGO76070 127 aa4.21□□□□□ -1.74
USP47-201ENST00000305481 COX7BP24311 80 aa4.21□□□□□ -1.74
USP47-201ENST00000305481 SDIM1Q6ZPB5 146 aa4.21□□□□□ -1.74
USP47-201ENST00000305481 KCNQ1DNQ9H478 68 aa4.21□□□□□ -1.74
USP47-201ENST00000305481 ACYP1P07311 99 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 GAGE2AQ6NT46 116 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 Q6ZQY7 126 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 DSCR8Q96T75 97 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 LINC00528Q8N1L1 170 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 KMT2AQ03164 3969 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 FBN3Q75N90 2809 aa4.2□□□□□ -1.74
USP47-201ENST00000305481 NBDYA0A0U1RRE5 68 aa4.19□□□□□ -1.74
USP47-201ENST00000305481 RPL37AP8A6NKH3 93 aa4.19□□□□□ -1.74
USP47-201ENST00000305481 PSCAO43653 123 aa4.19□□□□□ -1.74
USP47-201ENST00000305481 CNBPP62633 177 aaKnown RBP4.19□□□□□ -1.74
USP47-201ENST00000305481 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
USP47-201ENST00000305481 IGLV1-50A0A075B6I6 118 aa4.19□□□□□ -1.74
USP47-201ENST00000305481 LRCOL1A6NCL2 159 aa4.19□□□□□ -1.74
USP47-201ENST00000305481 Q6ZRN7 208 aaPredicted RBP4.19□□□□□ -1.74
USP47-201ENST00000305481 KRTAP4-16G5E9R7 235 aaPredicted RBP4.18□□□□□ -1.74
USP47-201ENST00000305481 JMJD7-PLA2G4BH0Y9G9 81 aa4.18□□□□□ -1.74
USP47-201ENST00000305481 DPH3Q96FX2 82 aa4.18□□□□□ -1.74
USP47-201ENST00000305481 A0A096LNI7 61 aa4.18□□□□□ -1.74
USP47-201ENST00000305481 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.18□□□□□ -1.74
USP47-201ENST00000305481 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.18□□□□□ -1.74
USP47-201ENST00000305481 CCKP06307 115 aa4.18□□□□□ -1.74
USP47-201ENST00000305481 LINC00846Q9NV44 126 aa4.17□□□□□ -1.74
USP47-201ENST00000305481 DNAH2Q9P225 4427 aa4.17□□□□□ -1.74
USP47-201ENST00000305481 SPRR1AP35321 89 aa4.17□□□□□ -1.74
USP47-201ENST00000305481 MRPL55Q7Z7F7 128 aaKnown RBP4.17□□□□□ -1.74
USP47-201ENST00000305481 C16orf90A8MZG2 172 aa4.17□□□□□ -1.74
USP47-201ENST00000305481 A0A1W2PNN7 141 aa4.16□□□□□ -1.74
USP47-201ENST00000305481 LINC00643Q86TS7 51 aa4.16□□□□□ -1.74
USP47-201ENST00000305481 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
USP47-201ENST00000305481 IGKV2-24A0A0C4DH68 120 aa4.16□□□□□ -1.74
USP47-201ENST00000305481 M0R2N4 97 aa4.16□□□□□ -1.74
USP47-201ENST00000305481 RPS28P62857 69 aaKnown RBP4.16□□□□□ -1.74
USP47-201ENST00000305481 Q9BRP9 147 aa4.16□□□□□ -1.74
USP47-201ENST00000305481 LAMTOR3Q9UHA4 124 aa4.16□□□□□ -1.74
USP47-201ENST00000305481 TRBV7-7A0A0K0K1E9 115 aa4.15□□□□□ -1.74
USP47-201ENST00000305481 PRYO14603 147 aa4.15□□□□□ -1.74
USP47-201ENST00000305481 RBM3P98179 157 aaKnown RBP4.15□□□□□ -1.74
USP47-201ENST00000305481 C1orf195Q5TG92 126 aa4.15□□□□□ -1.74
USP47-201ENST00000305481 Q6ZQT0 140 aa4.15□□□□□ -1.74
USP47-201ENST00000305481 FAM19A1Q7Z5A9 133 aa4.15□□□□□ -1.74
USP47-201ENST00000305481 TGP01266 2768 aa4.15□□□□□ -1.74
USP47-201ENST00000305481 Q6Q795 121 aa4.15□□□□□ -1.74
USP47-201ENST00000305481 Q6ZRX8 168 aa4.15□□□□□ -1.74
USP47-201ENST00000305481 LOC110117498A0A087WWA1 95 aa4.15□□□□□ -1.75
USP47-201ENST00000305481 CHTF8P0CG12 524 aa4.15□□□□□ -1.75
USP47-201ENST00000305481 C14orf177Q52M58 125 aa4.15□□□□□ -1.75
USP47-201ENST00000305481 C4orf48Q5BLP8 95 aa4.15□□□□□ -1.75
USP47-201ENST00000305481 HECTD4Q9Y4D8 3996 aa4.15□□□□□ -1.75
USP47-201ENST00000305481 H3BQ85 93 aa4.14□□□□□ -1.75
USP47-201ENST00000305481 LINC01547P58512 204 aaPredicted RBP4.14□□□□□ -1.75
USP47-201ENST00000305481 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
USP47-201ENST00000305481 KRTAP11-1Q8IUC1 163 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 Q8N377 158 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 TRBV7-4A0A0J9YYF1 115 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 Q6ZR54 194 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 ETDCA0A1B0GVM5 59 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 PANO1I0J062 215 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 REG3GQ6UW15 175 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 DHRS4-AS1Q9P1J3 65 aa4.13□□□□□ -1.75
USP47-201ENST00000305481 DEFB105AQ8NG35 78 aa4.12□□□□□ -1.75
USP47-201ENST00000305481 ST20-AS1Q8NBB2 130 aa4.12□□□□□ -1.75
USP47-201ENST00000305481 IMUPQ9GZP8 106 aa4.12□□□□□ -1.75
USP47-201ENST00000305481 GHRHP01286 108 aa4.12□□□□□ -1.75
USP47-201ENST00000305481 FUSP35637 526 aaKnown RBP eCLIP4.12□□□□□ -1.75
USP47-201ENST00000305481 A0A087WTM6 91 aa4.11□□□□□ -1.75
USP47-201ENST00000305481 PHF5AQ7RTV0 110 aaKnown RBP4.11□□□□□ -1.75
USP47-201ENST00000305481 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
USP47-201ENST00000305481 IGKV3D-7A0A0C4DH55 119 aa4.11□□□□□ -1.75
USP47-201ENST00000305481 UQCRQO14949 82 aa4.11□□□□□ -1.75
USP47-201ENST00000305481 Q6JHZ5 121 aa4.11□□□□□ -1.75
USP47-201ENST00000305481 DNAH17Q9UFH2 4485 aa4.11□□□□□ -1.75
USP47-201ENST00000305481 IGLV5-48A0A075B6I7 105 aa4.1□□□□□ -1.75
USP47-201ENST00000305481 PDE6GP18545 87 aa4.1□□□□□ -1.75
USP47-201ENST00000305481 DNAH6Q9C0G6 4158 aa4.1□□□□□ -1.75
USP47-201ENST00000305481 UBE2BP63146 152 aa4.09□□□□□ -1.75
USP47-201ENST00000305481 PRLHP81277 87 aa4.09□□□□□ -1.75
USP47-201ENST00000305481 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
USP47-201ENST00000305481 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.09□□□□□ -1.75
USP47-201ENST00000305481 TNP2Q05952 138 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 FRAS1Q86XX4 4008 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 EPM2AB3EWF7 344 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms