RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 IGLV5-48A0A075B6I7 105 aa12.62□□□□□ -0.39
TRA2A-201ENST00000297071 OCR1Q9BZK8 76 aa12.62□□□□□ -0.39
TRA2A-201ENST00000297071 SCXQ7RTU7 201 aa12.62□□□□□ -0.39
TRA2A-201ENST00000297071 PLA2G2DQ9UNK4 145 aa12.61□□□□□ -0.39
TRA2A-201ENST00000297071 HIGD2BQ4VC39 106 aa12.6□□□□□ -0.39
TRA2A-201ENST00000297071 A0A0U1RQV1 116 aa12.6□□□□□ -0.39
TRA2A-201ENST00000297071 WFDC10BQ8IUB3 73 aa12.58□□□□□ -0.4
TRA2A-201ENST00000297071 FP248Q71RG6 208 aaPredicted RBP12.57□□□□□ -0.4
TRA2A-201ENST00000297071 TLX1NBP0CAT3 122 aa12.56□□□□□ -0.4
TRA2A-201ENST00000297071 KPRPQ5T749 579 aaPredicted RBP12.56□□□□□ -0.4
TRA2A-201ENST00000297071 DHRS4-AS1Q9P1J3 65 aa12.56□□□□□ -0.4
TRA2A-201ENST00000297071 PRO0628Q9UI54 55 aa12.55□□□□□ -0.4
TRA2A-201ENST00000297071 PRYO14603 147 aa12.55□□□□□ -0.4
TRA2A-201ENST00000297071 Q6ZRP5 223 aa12.55□□□□□ -0.4
TRA2A-201ENST00000297071 LINC01556Q5JQF7 62 aa12.54□□□□□ -0.4
TRA2A-201ENST00000297071 Q8N377 158 aa12.54□□□□□ -0.4
TRA2A-201ENST00000297071 C1orf43Q9BWL3 253 aa12.54□□□□□ -0.4
TRA2A-201ENST00000297071 CUBNO60494 3623 aa12.54□□□□□ -0.4
TRA2A-201ENST00000297071 IGLV5-37A0A075B6J1 123 aa12.53□□□□□ -0.4
TRA2A-201ENST00000297071 SYCNQ0VAF6 134 aa12.53□□□□□ -0.4
TRA2A-201ENST00000297071 NBEAL1Q6ZS30 2694 aa12.53□□□□□ -0.4
TRA2A-201ENST00000297071 LCE6AA0A183 80 aa12.53□□□□□ -0.4
TRA2A-201ENST00000297071 NKAPP1Q8N9T2 125 aa12.52□□□□□ -0.41
TRA2A-201ENST00000297071 FUSP35637 526 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRA2A-201ENST00000297071 TNP2Q05952 138 aa12.5□□□□□ -0.41
TRA2A-201ENST00000297071 SPRR1AP35321 89 aa12.49□□□□□ -0.41
TRA2A-201ENST00000297071 C7orf33Q8WU49 177 aa12.49□□□□□ -0.41
TRA2A-201ENST00000297071 FBN1P35555 2871 aaKnown RBP12.48□□□□□ -0.41
TRA2A-201ENST00000297071 KRTAP4-16G5E9R7 235 aaPredicted RBP12.48□□□□□ -0.41
TRA2A-201ENST00000297071 HIVEP2P31629 2446 aa12.47□□□□□ -0.41
TRA2A-201ENST00000297071 Q6ZRX8 168 aa12.47□□□□□ -0.41
TRA2A-201ENST00000297071 LINC00336Q6ZUF6 198 aa12.47□□□□□ -0.41
TRA2A-201ENST00000297071 NBEAL2Q6ZNJ1 2754 aa12.46□□□□□ -0.41
TRA2A-201ENST00000297071 Q8N9L7 120 aa12.46□□□□□ -0.41
TRA2A-201ENST00000297071 SPRR4Q96PI1 79 aa12.46□□□□□ -0.41
TRA2A-201ENST00000297071 ESRGQ1W209 222 aa12.46□□□□□ -0.42
TRA2A-201ENST00000297071 ACANP16112 2415 aa12.45□□□□□ -0.42
TRA2A-201ENST00000297071 Q6ZTC4 211 aa12.45□□□□□ -0.42
TRA2A-201ENST00000297071 Q8NBF4 154 aa12.44□□□□□ -0.42
TRA2A-201ENST00000297071 A0A1W2PNM2 257 aa12.44□□□□□ -0.42
TRA2A-201ENST00000297071 C3orf84H3BNL1 204 aa12.44□□□□□ -0.42
TRA2A-201ENST00000297071 SMR3AQ99954 134 aa12.44□□□□□ -0.42
TRA2A-201ENST00000297071 SERTAD4-AS1Q5TG53 156 aa12.43□□□□□ -0.42
TRA2A-201ENST00000297071 IGLV1-50A0A075B6I6 118 aa12.41□□□□□ -0.42
TRA2A-201ENST00000297071 IGKV2D-24A0A075B6R9 120 aa12.41□□□□□ -0.42
TRA2A-201ENST00000297071 DNAH10OSP0CZ25 163 aa12.41□□□□□ -0.42
TRA2A-201ENST00000297071 ATRQ13535 2644 aa12.4□□□□□ -0.42
TRA2A-201ENST00000297071 C1orf137Q5JT78 98 aa12.4□□□□□ -0.42
TRA2A-201ENST00000297071 DEFB105AQ8NG35 78 aa12.39□□□□□ -0.43
TRA2A-201ENST00000297071 Q9BRP9 147 aa12.39□□□□□ -0.43
TRA2A-201ENST00000297071 LINC00474Q9P2X8 69 aa12.39□□□□□ -0.43
TRA2A-201ENST00000297071 STAB1Q9NY15 2570 aa12.38□□□□□ -0.43
TRA2A-201ENST00000297071 ETDCA0A1B0GVM5 59 aa12.38□□□□□ -0.43
TRA2A-201ENST00000297071 HIGD2AQ9BW72 106 aa12.37□□□□□ -0.43
TRA2A-201ENST00000297071 SMIM29Q86T20 159 aa12.37□□□□□ -0.43
TRA2A-201ENST00000297071 ZCCHC13Q8WW36 166 aaKnown RBP12.37□□□□□ -0.43
TRA2A-201ENST00000297071 COL6A5A8TX70 2615 aa12.36□□□□□ -0.43
TRA2A-201ENST00000297071 DSCR10P59022 87 aa12.32□□□□□ -0.44
TRA2A-201ENST00000297071 FAM229BQ4G0N7 80 aa12.31□□□□□ -0.44
TRA2A-201ENST00000297071 DEFB131BA0A096LNP1 70 aa12.3□□□□□ -0.44
TRA2A-201ENST00000297071 hDV103S1A0JD37 113 aa12.3□□□□□ -0.44
TRA2A-201ENST00000297071 INAFM1C9JVW0 142 aa12.3□□□□□ -0.44
TRA2A-201ENST00000297071 FAM30AQ9NZY2 134 aa12.3□□□□□ -0.44
TRA2A-201ENST00000297071 VWFP04275 2813 aa12.3□□□□□ -0.44
TRA2A-201ENST00000297071 RETNQ9HD89 108 aa12.29□□□□□ -0.44
TRA2A-201ENST00000297071 CYP4F30PQ9H0H9 118 aa12.27□□□□□ -0.44
TRA2A-201ENST00000297071 MRPL55Q7Z7F7 128 aaKnown RBP12.27□□□□□ -0.45
TRA2A-201ENST00000297071 KRTAP7-1Q8IUC3 87 aa12.26□□□□□ -0.45
TRA2A-201ENST00000297071 ST20-AS1Q8NBB2 130 aa12.26□□□□□ -0.45
TRA2A-201ENST00000297071 NSD1Q96L73 2696 aaPredicted RBP12.26□□□□□ -0.45
TRA2A-201ENST00000297071 IGLV8-61A0A075B6I0 122 aa12.25□□□□□ -0.45
TRA2A-201ENST00000297071 RPL37AP8A6NKH3 93 aa12.25□□□□□ -0.45
TRA2A-201ENST00000297071 C11orf45Q8TAV5 145 aa12.25□□□□□ -0.45
TRA2A-201ENST00000297071 HCG22E2RYF7 251 aa12.24□□□□□ -0.45
TRA2A-201ENST00000297071 Q1T7F1 81 aa12.23□□□□□ -0.45
TRA2A-201ENST00000297071 K7EQZ3 153 aa12.23□□□□□ -0.45
TRA2A-201ENST00000297071 NDUFB1O75438 58 aa12.23□□□□□ -0.45
TRA2A-201ENST00000297071 KRTAP10-11P60412 298 aa12.23□□□□□ -0.45
TRA2A-201ENST00000297071 FAM168BA1KXE4 195 aa12.22□□□□□ -0.45
TRA2A-201ENST00000297071 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
TRA2A-201ENST00000297071 UBE2BP63146 152 aa12.2□□□□□ -0.46
TRA2A-201ENST00000297071 LINC00476Q8WZB0 136 aa12.2□□□□□ -0.46
TRA2A-201ENST00000297071 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.19□□□□□ -0.46
TRA2A-201ENST00000297071 MPLKIPQ8TAP9 179 aa12.19□□□□□ -0.46
TRA2A-201ENST00000297071 BRK1Q8WUW1 75 aa12.18□□□□□ -0.46
TRA2A-201ENST00000297071 C1orf64Q8NEQ6 169 aa12.17□□□□□ -0.46
TRA2A-201ENST00000297071 PSCAO43653 123 aa12.16□□□□□ -0.46
TRA2A-201ENST00000297071 OXLD1Q5BKU9 147 aa12.16□□□□□ -0.46
TRA2A-201ENST00000297071 LINC00588Q9Y4M8 146 aa12.16□□□□□ -0.46
TRA2A-201ENST00000297071 H3BPC8 53 aa12.15□□□□□ -0.46
TRA2A-201ENST00000297071 IGFL1Q6UW32 110 aa12.15□□□□□ -0.46
TRA2A-201ENST00000297071 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
TRA2A-201ENST00000297071 MP68P56378 58 aa12.11□□□□□ -0.47
TRA2A-201ENST00000297071 V9GYY9 64 aa12.1□□□□□ -0.47
TRA2A-201ENST00000297071 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
TRA2A-201ENST00000297071 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
TRA2A-201ENST00000297071 SPANXA2-OT1Q8N9U9 137 aa12.09□□□□□ -0.47
TRA2A-201ENST00000297071 SPRR1BP22528 89 aa12.08□□□□□ -0.48
TRA2A-201ENST00000297071 DNAH1Q9P2D7 4330 aa12.08□□□□□ -0.48
TRA2A-201ENST00000297071 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms