RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 BPY2O14599 106 aa12.55□□□□□ -0.4
LSM12-201ENST00000293406 NREPQ16612 68 aa12.55□□□□□ -0.4
LSM12-201ENST00000293406 LINC01556Q5JQF7 62 aa12.55□□□□□ -0.4
LSM12-201ENST00000293406 KCNQ1DNQ9H478 68 aa12.55□□□□□ -0.4
LSM12-201ENST00000293406 Q8N9L7 120 aa12.55□□□□□ -0.4
LSM12-201ENST00000293406 DEFB105AQ8NG35 78 aa12.54□□□□□ -0.4
LSM12-201ENST00000293406 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
LSM12-201ENST00000293406 SERTAD4-AS1Q5TG53 156 aa12.53□□□□□ -0.4
LSM12-201ENST00000293406 EPM2AB3EWF7 344 aa12.53□□□□□ -0.4
LSM12-201ENST00000293406 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
LSM12-201ENST00000293406 C3orf84H3BNL1 204 aa12.51□□□□□ -0.41
LSM12-201ENST00000293406 NDUFC1O43677 76 aa12.51□□□□□ -0.41
LSM12-201ENST00000293406 IGKV4-1P06312 121 aa12.51□□□□□ -0.41
LSM12-201ENST00000293406 Q8N377 158 aa12.51□□□□□ -0.41
LSM12-201ENST00000293406 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
LSM12-201ENST00000293406 HRCT1Q6UXD1 115 aa12.5□□□□□ -0.41
LSM12-201ENST00000293406 HECTD1Q9ULT8 2610 aa12.5□□□□□ -0.41
LSM12-201ENST00000293406 PKD1L1Q8TDX9 2849 aa12.49□□□□□ -0.41
LSM12-201ENST00000293406 DEFB131BA0A096LNP1 70 aa12.49□□□□□ -0.41
LSM12-201ENST00000293406 TMEM254Q8TBM7 123 aa12.48□□□□□ -0.41
LSM12-201ENST00000293406 IGLV5-48A0A075B6I7 105 aa12.47□□□□□ -0.41
LSM12-201ENST00000293406 ERC2-IT1O76042 136 aa12.46□□□□□ -0.41
LSM12-201ENST00000293406 DHRS4-AS1Q9P1J3 65 aa12.45□□□□□ -0.42
LSM12-201ENST00000293406 RPL37AP8A6NKH3 93 aa12.44□□□□□ -0.42
LSM12-201ENST00000293406 Q6ZRX8 168 aa12.44□□□□□ -0.42
LSM12-201ENST00000293406 C11orf45Q8TAV5 145 aa12.44□□□□□ -0.42
LSM12-201ENST00000293406 TLX1NBP0CAT3 122 aa12.44□□□□□ -0.42
LSM12-201ENST00000293406 DNAH10OSP0CZ25 163 aa12.43□□□□□ -0.42
LSM12-201ENST00000293406 PLA2G2DQ9UNK4 145 aa12.43□□□□□ -0.42
LSM12-201ENST00000293406 FUSP35637 526 aaKnown RBP eCLIP12.43□□□□□ -0.42
LSM12-201ENST00000293406 OCR1Q9BZK8 76 aa12.43□□□□□ -0.42
LSM12-201ENST00000293406 ATP5EP56381 51 aaPredicted RBP12.42□□□□□ -0.42
LSM12-201ENST00000293406 Q9BRP9 147 aa12.42□□□□□ -0.42
LSM12-201ENST00000293406 KMT2BQ9UMN6 2715 aaPredicted RBP12.41□□□□□ -0.42
LSM12-201ENST00000293406 ETDCA0A1B0GVM5 59 aa12.4□□□□□ -0.42
LSM12-201ENST00000293406 FAM168BA1KXE4 195 aa12.4□□□□□ -0.42
LSM12-201ENST00000293406 KRTAP4-16G5E9R7 235 aaPredicted RBP12.4□□□□□ -0.42
LSM12-201ENST00000293406 PRYO14603 147 aa12.4□□□□□ -0.42
LSM12-201ENST00000293406 IGLV1-50A0A075B6I6 118 aa12.4□□□□□ -0.42
LSM12-201ENST00000293406 A0A1B0GW54 56 aa12.39□□□□□ -0.43
LSM12-201ENST00000293406 MRAPQ8TCY5 172 aa12.39□□□□□ -0.43
LSM12-201ENST00000293406 A0A1W2PNM2 257 aa12.38□□□□□ -0.43
LSM12-201ENST00000293406 SMIM26A0A096LP01 95 aa12.38□□□□□ -0.43
LSM12-201ENST00000293406 IGLV5-37A0A075B6J1 123 aa12.37□□□□□ -0.43
LSM12-201ENST00000293406 SPRR1AP35321 89 aa12.37□□□□□ -0.43
LSM12-201ENST00000293406 C1orf137Q5JT78 98 aa12.37□□□□□ -0.43
LSM12-201ENST00000293406 ST20-AS1Q8NBB2 130 aa12.37□□□□□ -0.43
LSM12-201ENST00000293406 ANK2Q01484 3957 aa12.37□□□□□ -0.43
LSM12-201ENST00000293406 TENM3Q9P273 2699 aa12.36□□□□□ -0.43
LSM12-201ENST00000293406 A0A0U1RQV1 116 aa12.36□□□□□ -0.43
LSM12-201ENST00000293406 TNP2Q05952 138 aa12.36□□□□□ -0.43
LSM12-201ENST00000293406 CASC10Q5T4H9 136 aa12.34□□□□□ -0.43
LSM12-201ENST00000293406 FP248Q71RG6 208 aaPredicted RBP12.33□□□□□ -0.44
LSM12-201ENST00000293406 KRTAP7-1Q8IUC3 87 aa12.33□□□□□ -0.44
LSM12-201ENST00000293406 Q8NBF4 154 aa12.33□□□□□ -0.44
LSM12-201ENST00000293406 SMIM29Q86T20 159 aa12.32□□□□□ -0.44
LSM12-201ENST00000293406 LINC00588Q9Y4M8 146 aa12.32□□□□□ -0.44
LSM12-201ENST00000293406 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
LSM12-201ENST00000293406 HIGD2AQ9BW72 106 aa12.3□□□□□ -0.44
LSM12-201ENST00000293406 UBE2BP63146 152 aa12.29□□□□□ -0.44
LSM12-201ENST00000293406 SPRR4Q96PI1 79 aa12.29□□□□□ -0.44
LSM12-201ENST00000293406 FAM30AQ9NZY2 134 aa12.29□□□□□ -0.44
LSM12-201ENST00000293406 LINC00474Q9P2X8 69 aa12.27□□□□□ -0.44
LSM12-201ENST00000293406 DSCR10P59022 87 aa12.24□□□□□ -0.45
LSM12-201ENST00000293406 REG3GQ6UW15 175 aa12.24□□□□□ -0.45
LSM12-201ENST00000293406 DNAH1Q9P2D7 4330 aa12.23□□□□□ -0.45
LSM12-201ENST00000293406 LINC00336Q6ZUF6 198 aa12.22□□□□□ -0.45
LSM12-201ENST00000293406 K7EQZ3 153 aa12.21□□□□□ -0.45
LSM12-201ENST00000293406 CMYA5Q8N3K9 4069 aa12.21□□□□□ -0.45
LSM12-201ENST00000293406 LCE6AA0A183 80 aa12.2□□□□□ -0.46
LSM12-201ENST00000293406 LINC00476Q8WZB0 136 aa12.2□□□□□ -0.46
LSM12-201ENST00000293406 FAM229BQ4G0N7 80 aa12.2□□□□□ -0.46
LSM12-201ENST00000293406 KRTAP24-1Q3LI83 254 aa12.19□□□□□ -0.46
LSM12-201ENST00000293406 FLNBO75369 2602 aaKnown RBP12.18□□□□□ -0.46
LSM12-201ENST00000293406 PRO0628Q9UI54 55 aa12.15□□□□□ -0.46
LSM12-201ENST00000293406 DNAH3Q8TD57 4116 aa12.14□□□□□ -0.47
LSM12-201ENST00000293406 A0A0G2JQZ4 141 aa12.14□□□□□ -0.47
LSM12-201ENST00000293406 A0A1W2PNN7 141 aa12.14□□□□□ -0.47
LSM12-201ENST00000293406 IGFL1Q6UW32 110 aa12.14□□□□□ -0.47
LSM12-201ENST00000293406 HCG22E2RYF7 251 aa12.13□□□□□ -0.47
LSM12-201ENST00000293406 PSCAO43653 123 aa12.12□□□□□ -0.47
LSM12-201ENST00000293406 MPLKIPQ8TAP9 179 aa12.12□□□□□ -0.47
LSM12-201ENST00000293406 PRLHP81277 87 aa12.11□□□□□ -0.47
LSM12-201ENST00000293406 STAB1Q9NY15 2570 aa12.11□□□□□ -0.47
LSM12-201ENST00000293406 A0A096LNI7 61 aa12.1□□□□□ -0.47
LSM12-201ENST00000293406 IGKV2-24A0A0C4DH68 120 aa12.1□□□□□ -0.47
LSM12-201ENST00000293406 PRB2P02812 416 aaPredicted RBP12.1□□□□□ -0.47
LSM12-201ENST00000293406 ZCCHC13Q8WW36 166 aaKnown RBP12.1□□□□□ -0.47
LSM12-201ENST00000293406 FBN1P35555 2871 aaKnown RBP12.09□□□□□ -0.47
LSM12-201ENST00000293406 DEFB116Q30KQ4 102 aa12.09□□□□□ -0.47
LSM12-201ENST00000293406 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.08□□□□□ -0.48
LSM12-201ENST00000293406 C16orf90A8MZG2 172 aa12.08□□□□□ -0.48
LSM12-201ENST00000293406 MAST4O15021 2626 aa12.08□□□□□ -0.48
LSM12-201ENST00000293406 BAHCC1Q9P281 2608 aa12.07□□□□□ -0.48
LSM12-201ENST00000293406 A0A087WSZ3 146 aa12.06□□□□□ -0.48
LSM12-201ENST00000293406 IGLV8-61A0A075B6I0 122 aa12.06□□□□□ -0.48
LSM12-201ENST00000293406 hDV103S1A0JD37 113 aa12.05□□□□□ -0.48
LSM12-201ENST00000293406 NOTCH1P46531 2555 aa12.05□□□□□ -0.48
LSM12-201ENST00000293406 F8P00451 2351 aa12.05□□□□□ -0.48
LSM12-201ENST00000293406 CNBPP62633 177 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms