RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 H3BQ85 93 aa12.79□□□□□ -0.36
CDC42EP2-201ENST00000279249 XCL1P47992 114 aa12.79□□□□□ -0.36
CDC42EP2-201ENST00000279249 LINC00476Q8WZB0 136 aa12.79□□□□□ -0.36
CDC42EP2-201ENST00000279249 KRTAP26-1Q6PEX3 210 aa12.78□□□□□ -0.36
CDC42EP2-201ENST00000279249 SERP1Q9Y6X1 66 aa12.78□□□□□ -0.36
CDC42EP2-201ENST00000279249 C4orf26Q17RF5 130 aa12.78□□□□□ -0.36
CDC42EP2-201ENST00000279249 NBDYA0A0U1RRE5 68 aa12.77□□□□□ -0.37
CDC42EP2-201ENST00000279249 Q6ZQT0 140 aa12.77□□□□□ -0.37
CDC42EP2-201ENST00000279249 ZNF561-AS1K7EIQ3 104 aa12.76□□□□□ -0.37
CDC42EP2-201ENST00000279249 LY6G6CO95867 125 aa12.76□□□□□ -0.37
CDC42EP2-201ENST00000279249 CD164L2Q6UWJ8 174 aa12.76□□□□□ -0.37
CDC42EP2-201ENST00000279249 C20orf197Q8N268 126 aa12.76□□□□□ -0.37
CDC42EP2-201ENST00000279249 PDE6GP18545 87 aa12.75□□□□□ -0.37
CDC42EP2-201ENST00000279249 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
CDC42EP2-201ENST00000279249 KLKP1Q107X0 134 aa12.75□□□□□ -0.37
CDC42EP2-201ENST00000279249 C6orf223Q8N319 242 aa12.75□□□□□ -0.37
CDC42EP2-201ENST00000279249 KMT2AQ03164 3969 aa12.75□□□□□ -0.37
CDC42EP2-201ENST00000279249 LINC00575Q6W349 94 aa12.74□□□□□ -0.37
CDC42EP2-201ENST00000279249 HRCT1Q6UXD1 115 aa12.73□□□□□ -0.37
CDC42EP2-201ENST00000279249 DNAH6Q9C0G6 4158 aa12.73□□□□□ -0.37
CDC42EP2-201ENST00000279249 IGKV2D-24A0A075B6R9 120 aa12.72□□□□□ -0.37
CDC42EP2-201ENST00000279249 H7BZZ5 65 aa12.72□□□□□ -0.37
CDC42EP2-201ENST00000279249 C1orf43Q9BWL3 253 aa12.72□□□□□ -0.37
CDC42EP2-201ENST00000279249 CXCL6P80162 114 aa12.71□□□□□ -0.37
CDC42EP2-201ENST00000279249 M0R2N4 97 aa12.71□□□□□ -0.38
CDC42EP2-201ENST00000279249 KIAA0087Q14695 138 aa12.71□□□□□ -0.38
CDC42EP2-201ENST00000279249 C6orf99Q4VX62 202 aa12.71□□□□□ -0.38
CDC42EP2-201ENST00000279249 Q6ZR54 194 aa12.7□□□□□ -0.38
CDC42EP2-201ENST00000279249 LINC01547P58512 204 aaPredicted RBP12.69□□□□□ -0.38
CDC42EP2-201ENST00000279249 DNAH10Q8IVF4 4471 aa12.69□□□□□ -0.38
CDC42EP2-201ENST00000279249 NDUFC1O43677 76 aa12.67□□□□□ -0.38
CDC42EP2-201ENST00000279249 PRR3P79522 188 aaKnown RBP12.67□□□□□ -0.38
CDC42EP2-201ENST00000279249 RMI2Q96E14 147 aa12.67□□□□□ -0.38
CDC42EP2-201ENST00000279249 Q6ZVQ6 151 aa12.66□□□□□ -0.38
CDC42EP2-201ENST00000279249 ATP5EP56381 51 aaPredicted RBP12.66□□□□□ -0.38
CDC42EP2-201ENST00000279249 HYDINQ4G0P3 5121 aa12.65□□□□□ -0.38
CDC42EP2-201ENST00000279249 Q6ZRN7 208 aaPredicted RBP12.64□□□□□ -0.39
CDC42EP2-201ENST00000279249 LAMTOR3Q9UHA4 124 aa12.64□□□□□ -0.39
CDC42EP2-201ENST00000279249 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
CDC42EP2-201ENST00000279249 C15orf56Q8N910 161 aa12.62□□□□□ -0.39
CDC42EP2-201ENST00000279249 SMIM26A0A096LP01 95 aa12.62□□□□□ -0.39
CDC42EP2-201ENST00000279249 IGLV6-57P01721 117 aa12.61□□□□□ -0.39
CDC42EP2-201ENST00000279249 HAMPP81172 84 aa12.61□□□□□ -0.39
CDC42EP2-201ENST00000279249 LCE6AA0A183 80 aa12.6□□□□□ -0.39
CDC42EP2-201ENST00000279249 PRO0628Q9UI54 55 aa12.6□□□□□ -0.39
CDC42EP2-201ENST00000279249 DNAH2Q9P225 4427 aa12.59□□□□□ -0.39
CDC42EP2-201ENST00000279249 SPAG11BQ08648 103 aa12.57□□□□□ -0.4
CDC42EP2-201ENST00000279249 HIGD2BQ4VC39 106 aa12.57□□□□□ -0.4
CDC42EP2-201ENST00000279249 Q8NDZ9 215 aa12.57□□□□□ -0.4
CDC42EP2-201ENST00000279249 PSCAO43653 123 aa12.57□□□□□ -0.4
CDC42EP2-201ENST00000279249 ERC2-IT1O76042 136 aa12.57□□□□□ -0.4
CDC42EP2-201ENST00000279249 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.56□□□□□ -0.4
CDC42EP2-201ENST00000279249 TRBV7-4A0A0J9YYF1 115 aa12.55□□□□□ -0.4
CDC42EP2-201ENST00000279249 GVQW2A0A096LPI5 108 aaPredicted RBP12.55□□□□□ -0.4
CDC42EP2-201ENST00000279249 F8WEM9 126 aa12.54□□□□□ -0.4
CDC42EP2-201ENST00000279249 C1orf134Q5TEV5 83 aa12.54□□□□□ -0.4
CDC42EP2-201ENST00000279249 Q6ZQY7 126 aa12.54□□□□□ -0.4
CDC42EP2-201ENST00000279249 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
CDC42EP2-201ENST00000279249 C9orf116Q5BN46 136 aaPredicted RBP12.53□□□□□ -0.4
CDC42EP2-201ENST00000279249 TRBV7-6A0A0J9YX20 115 aa12.52□□□□□ -0.4
CDC42EP2-201ENST00000279249 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.41
CDC42EP2-201ENST00000279249 DIRC1Q969H9 104 aa12.51□□□□□ -0.41
CDC42EP2-201ENST00000279249 SNURFQ9Y675 71 aa12.51□□□□□ -0.41
CDC42EP2-201ENST00000279249 C10orf25Q5T742 122 aa12.5□□□□□ -0.41
CDC42EP2-201ENST00000279249 KMT2CQ8NEZ4 4911 aaKnown RBP12.49□□□□□ -0.41
CDC42EP2-201ENST00000279249 LINC00336Q6ZUF6 198 aa12.49□□□□□ -0.41
CDC42EP2-201ENST00000279249 FP248Q71RG6 208 aaPredicted RBP12.49□□□□□ -0.41
CDC42EP2-201ENST00000279249 DNAH17Q9UFH2 4485 aa12.49□□□□□ -0.41
CDC42EP2-201ENST00000279249 UNQ6190/PRO20217Q6UXQ8 127 aa12.49□□□□□ -0.41
CDC42EP2-201ENST00000279249 RYR2Q92736 4967 aa12.47□□□□□ -0.41
CDC42EP2-201ENST00000279249 RTL8CO15255 209 aa12.47□□□□□ -0.41
CDC42EP2-201ENST00000279249 NREPQ16612 68 aa12.47□□□□□ -0.41
CDC42EP2-201ENST00000279249 CAMK2N2Q96S95 79 aa12.46□□□□□ -0.41
CDC42EP2-201ENST00000279249 COX7BP24311 80 aa12.45□□□□□ -0.42
CDC42EP2-201ENST00000279249 Q6ZRU5 148 aa12.45□□□□□ -0.42
CDC42EP2-201ENST00000279249 A0A087WTM6 91 aa12.45□□□□□ -0.42
CDC42EP2-201ENST00000279249 ELOF1P60002 83 aaKnown RBP12.45□□□□□ -0.42
CDC42EP2-201ENST00000279249 C6orf48Q9UBA6 75 aa12.45□□□□□ -0.42
CDC42EP2-201ENST00000279249 TMEM254Q8TBM7 123 aa12.44□□□□□ -0.42
CDC42EP2-201ENST00000279249 BPY2O14599 106 aa12.43□□□□□ -0.42
CDC42EP2-201ENST00000279249 ZNF73O43830 326 aaPredicted RBP12.43□□□□□ -0.42
CDC42EP2-201ENST00000279249 F8WDY8 70 aa12.42□□□□□ -0.42
CDC42EP2-201ENST00000279249 TNP2Q05952 138 aa12.42□□□□□ -0.42
CDC42EP2-201ENST00000279249 SYCNQ0VAF6 134 aa12.42□□□□□ -0.42
CDC42EP2-201ENST00000279249 C14orf177Q52M58 125 aa12.42□□□□□ -0.42
CDC42EP2-201ENST00000279249 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.4□□□□□ -0.42
CDC42EP2-201ENST00000279249 CNBPP62633 177 aaKnown RBP12.38□□□□□ -0.43
CDC42EP2-201ENST00000279249 FAT2Q9NYQ8 4349 aa12.37□□□□□ -0.43
CDC42EP2-201ENST00000279249 SCXQ7RTU7 201 aa12.37□□□□□ -0.43
CDC42EP2-201ENST00000279249 A0A0U1RQV1 116 aa12.36□□□□□ -0.43
CDC42EP2-201ENST00000279249 OCR1Q9BZK8 76 aa12.35□□□□□ -0.43
CDC42EP2-201ENST00000279249 PRYO14603 147 aa12.35□□□□□ -0.43
CDC42EP2-201ENST00000279249 IGKV4-1P06312 121 aa12.35□□□□□ -0.43
CDC42EP2-201ENST00000279249 DNAH11Q96DT5 4516 aa12.34□□□□□ -0.43
CDC42EP2-201ENST00000279249 FUSP35637 526 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDC42EP2-201ENST00000279249 HECTD4Q9Y4D8 3996 aa12.34□□□□□ -0.43
CDC42EP2-201ENST00000279249 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
CDC42EP2-201ENST00000279249 M0R378 163 aa12.32□□□□□ -0.44
CDC42EP2-201ENST00000279249 VPREB1P12018 145 aa12.32□□□□□ -0.44
CDC42EP2-201ENST00000279249 LINC00474Q9P2X8 69 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms