RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 RMI2Q96E14 147 aa7.58□□□□□ -1.2
SSRP1-201ENST00000278412 hADV29S1A0JD25 119 aa7.57□□□□□ -1.2
SSRP1-201ENST00000278412 OXTP01178 125 aa7.57□□□□□ -1.2
SSRP1-201ENST00000278412 C4orf26Q17RF5 130 aa7.57□□□□□ -1.2
SSRP1-201ENST00000278412 DNAH11Q96DT5 4516 aa7.57□□□□□ -1.2
SSRP1-201ENST00000278412 CLEC2BQ92478 149 aa7.57□□□□□ -1.2
SSRP1-201ENST00000278412 COX17Q14061 63 aa7.56□□□□□ -1.2
SSRP1-201ENST00000278412 SERTAD4-AS1Q5TG53 156 aa7.56□□□□□ -1.2
SSRP1-201ENST00000278412 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
SSRP1-201ENST00000278412 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
SSRP1-201ENST00000278412 CHTF8P0CG12 524 aa7.56□□□□□ -1.2
SSRP1-201ENST00000278412 HRCT1Q6UXD1 115 aa7.56□□□□□ -1.2
SSRP1-201ENST00000278412 CYSTM1Q9H1C7 97 aa7.56□□□□□ -1.2
SSRP1-201ENST00000278412 PKHD1P08F94 4074 aa7.55□□□□□ -1.2
SSRP1-201ENST00000278412 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
SSRP1-201ENST00000278412 IGKV2-24A0A0C4DH68 120 aa7.55□□□□□ -1.2
SSRP1-201ENST00000278412 F8WDY8 70 aa7.55□□□□□ -1.2
SSRP1-201ENST00000278412 SMIM11BQ8TCY0 68 aa7.54□□□□□ -1.2
SSRP1-201ENST00000278412 PANO1I0J062 215 aa7.53□□□□□ -1.2
SSRP1-201ENST00000278412 FAM218AQ96MZ4 157 aa7.53□□□□□ -1.2
SSRP1-201ENST00000278412 RYR2Q92736 4967 aa7.52□□□□□ -1.2
SSRP1-201ENST00000278412 A0A096LNI7 61 aa7.52□□□□□ -1.21
SSRP1-201ENST00000278412 VPREB1P12018 145 aa7.52□□□□□ -1.21
SSRP1-201ENST00000278412 PKD1P98161 4303 aa7.52□□□□□ -1.21
SSRP1-201ENST00000278412 TNP2Q05952 138 aa7.51□□□□□ -1.21
SSRP1-201ENST00000278412 DSCR8Q96T75 97 aa7.51□□□□□ -1.21
SSRP1-201ENST00000278412 A0A087WTM6 91 aa7.51□□□□□ -1.21
SSRP1-201ENST00000278412 TRBV10-3A0A0K0K1G6 114 aa7.5□□□□□ -1.21
SSRP1-201ENST00000278412 SERP2Q8N6R1 65 aa7.5□□□□□ -1.21
SSRP1-201ENST00000278412 PRO0628Q9UI54 55 aa7.49□□□□□ -1.21
SSRP1-201ENST00000278412 RPL37AP8A6NKH3 93 aa7.49□□□□□ -1.21
SSRP1-201ENST00000278412 C1orf134Q5TEV5 83 aa7.49□□□□□ -1.21
SSRP1-201ENST00000278412 Q8N814 137 aa7.49□□□□□ -1.21
SSRP1-201ENST00000278412 TRAV13-2A0A0B4J235 113 aa7.48□□□□□ -1.21
SSRP1-201ENST00000278412 C3orf84H3BNL1 204 aa7.48□□□□□ -1.21
SSRP1-201ENST00000278412 RTL8CO15255 209 aa7.48□□□□□ -1.21
SSRP1-201ENST00000278412 COPS9Q8WXC6 57 aa7.48□□□□□ -1.21
SSRP1-201ENST00000278412 RYR3Q15413 4870 aa7.48□□□□□ -1.21
SSRP1-201ENST00000278412 DNAH8Q96JB1 4490 aa7.48□□□□□ -1.21
SSRP1-201ENST00000278412 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
SSRP1-201ENST00000278412 A0A087WYN8 130 aa7.47□□□□□ -1.21
SSRP1-201ENST00000278412 NDUFC2O95298 119 aa7.47□□□□□ -1.21
SSRP1-201ENST00000278412 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
SSRP1-201ENST00000278412 S100A7L2Q5SY68 101 aa7.47□□□□□ -1.21
SSRP1-201ENST00000278412 KRTAP10-2P60368 255 aa7.46□□□□□ -1.22
SSRP1-201ENST00000278412 C6orf99Q4VX62 202 aa7.46□□□□□ -1.22
SSRP1-201ENST00000278412 TLX1NBP0CAT3 122 aa7.46□□□□□ -1.22
SSRP1-201ENST00000278412 KRTAP11-1Q8IUC1 163 aa7.46□□□□□ -1.22
SSRP1-201ENST00000278412 C7orf33Q8WU49 177 aa7.46□□□□□ -1.22
SSRP1-201ENST00000278412 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
SSRP1-201ENST00000278412 RPL28P46779 137 aaKnown RBP7.45□□□□□ -1.22
SSRP1-201ENST00000278412 C22orf24Q9Y442 160 aa7.45□□□□□ -1.22
SSRP1-201ENST00000278412 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.45□□□□□ -1.22
SSRP1-201ENST00000278412 INAFM2P0DMQ5 153 aa7.45□□□□□ -1.22
SSRP1-201ENST00000278412 EPM2AB3EWF7 344 aa7.44□□□□□ -1.22
SSRP1-201ENST00000278412 HAMPP81172 84 aa7.44□□□□□ -1.22
SSRP1-201ENST00000278412 Q6JHZ5 121 aa7.43□□□□□ -1.22
SSRP1-201ENST00000278412 C9orf163Q8N9P6 203 aa7.43□□□□□ -1.22
SSRP1-201ENST00000278412 BAALC-AS2P0C853 105 aa7.42□□□□□ -1.22
SSRP1-201ENST00000278412 LINC00336Q6ZUF6 198 aa7.42□□□□□ -1.22
SSRP1-201ENST00000278412 LINC00167Q96N53 147 aa7.42□□□□□ -1.22
SSRP1-201ENST00000278412 C16orf90A8MZG2 172 aa7.41□□□□□ -1.22
SSRP1-201ENST00000278412 NKAPP1Q8N9T2 125 aa7.41□□□□□ -1.22
SSRP1-201ENST00000278412 TRAV23DV6A0A075B6W5 121 aa7.41□□□□□ -1.22
SSRP1-201ENST00000278412 PHF5AQ7RTV0 110 aaKnown RBP7.41□□□□□ -1.22
SSRP1-201ENST00000278412 M0R378 163 aa7.4□□□□□ -1.22
SSRP1-201ENST00000278412 C14orf177Q52M58 125 aa7.4□□□□□ -1.22
SSRP1-201ENST00000278412 LRP1BQ9NZR2 4599 aa7.39□□□□□ -1.23
SSRP1-201ENST00000278412 ZNF73O43830 326 aaPredicted RBP7.38□□□□□ -1.23
SSRP1-201ENST00000278412 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
SSRP1-201ENST00000278412 IGLV5-52A0A0A0MRZ9 124 aa7.37□□□□□ -1.23
SSRP1-201ENST00000278412 IGKV3D-7A0A0C4DH55 119 aa7.37□□□□□ -1.23
SSRP1-201ENST00000278412 FAM30AQ9NZY2 134 aa7.37□□□□□ -1.23
SSRP1-201ENST00000278412 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
SSRP1-201ENST00000278412 A0A087WVE0 104 aa7.37□□□□□ -1.23
SSRP1-201ENST00000278412 LCE6AA0A183 80 aa7.36□□□□□ -1.23
SSRP1-201ENST00000278412 FAM236DA0A1B0GTK5 79 aa7.36□□□□□ -1.23
SSRP1-201ENST00000278412 FAM236CP0DP71 79 aa7.36□□□□□ -1.23
SSRP1-201ENST00000278412 IGLV1-50A0A075B6I6 118 aa7.36□□□□□ -1.23
SSRP1-201ENST00000278412 SEC61GP60059 68 aa7.36□□□□□ -1.23
SSRP1-201ENST00000278412 DYNC1H1Q14204 4646 aaKnown RBP7.35□□□□□ -1.23
SSRP1-201ENST00000278412 DNAL4O96015 105 aa7.35□□□□□ -1.23
SSRP1-201ENST00000278412 DIRC1Q969H9 104 aa7.34□□□□□ -1.23
SSRP1-201ENST00000278412 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
SSRP1-201ENST00000278412 SPACA4Q8TDM5 124 aa7.34□□□□□ -1.23
SSRP1-201ENST00000278412 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
SSRP1-201ENST00000278412 PLA2G2DQ9UNK4 145 aa7.34□□□□□ -1.23
SSRP1-201ENST00000278412 KCNQ1DNQ9H478 68 aa7.33□□□□□ -1.24
SSRP1-201ENST00000278412 PKIGQ9Y2B9 76 aa7.33□□□□□ -1.24
SSRP1-201ENST00000278412 IGLV5-37A0A075B6J1 123 aa7.33□□□□□ -1.24
SSRP1-201ENST00000278412 LINC00575Q6W349 94 aa7.33□□□□□ -1.24
SSRP1-201ENST00000278412 KRTAP10-1P60331 282 aa7.32□□□□□ -1.24
SSRP1-201ENST00000278412 PRLHP81277 87 aa7.32□□□□□ -1.24
SSRP1-201ENST00000278412 Q9BRP9 147 aa7.32□□□□□ -1.24
SSRP1-201ENST00000278412 KRTAP4-16G5E9R7 235 aaPredicted RBP7.32□□□□□ -1.24
SSRP1-201ENST00000278412 ERC2-IT1O76042 136 aa7.32□□□□□ -1.24
SSRP1-201ENST00000278412 V9GYY9 64 aa7.32□□□□□ -1.24
SSRP1-201ENST00000278412 GHRHP01286 108 aa7.31□□□□□ -1.24
SSRP1-201ENST00000278412 COX7BP24311 80 aa7.31□□□□□ -1.24
SSRP1-201ENST00000278412 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms