RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 OXLD1Q5BKU9 147 aa10.11□□□□□ -0.79
CASC3-201ENST00000264645 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
CASC3-201ENST00000264645 INAFM1C9JVW0 142 aa10.1□□□□□ -0.79
CASC3-201ENST00000264645 J3QKU1 62 aa10.1□□□□□ -0.79
CASC3-201ENST00000264645 GIG44P09565 113 aaPredicted RBP10.1□□□□□ -0.79
CASC3-201ENST00000264645 LRBAP50851 2863 aa10.1□□□□□ -0.79
CASC3-201ENST00000264645 IGHV6-1A0A0B4J1U7 121 aa10.09□□□□□ -0.79
CASC3-201ENST00000264645 RPL37AP61513 92 aaKnown RBP10.09□□□□□ -0.79
CASC3-201ENST00000264645 UNC79Q9P2D8 2635 aa10.09□□□□□ -0.79
CASC3-201ENST00000264645 Q6ZRX8 168 aa10.09□□□□□ -0.79
CASC3-201ENST00000264645 SMR3AQ99954 134 aa10.09□□□□□ -0.79
CASC3-201ENST00000264645 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
CASC3-201ENST00000264645 ATRQ13535 2644 aa10.08□□□□□ -0.8
CASC3-201ENST00000264645 ASH1LQ9NR48 2969 aaKnown RBP10.08□□□□□ -0.8
CASC3-201ENST00000264645 Q6ZRP5 223 aa10.08□□□□□ -0.8
CASC3-201ENST00000264645 A0A1B0GW54 56 aa10.07□□□□□ -0.8
CASC3-201ENST00000264645 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
CASC3-201ENST00000264645 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
CASC3-201ENST00000264645 C14orf177Q52M58 125 aa10.05□□□□□ -0.8
CASC3-201ENST00000264645 HECTD1Q9ULT8 2610 aa10.05□□□□□ -0.8
CASC3-201ENST00000264645 ATMQ13315 3056 aa10.05□□□□□ -0.8
CASC3-201ENST00000264645 FAM229BQ4G0N7 80 aa10.04□□□□□ -0.8
CASC3-201ENST00000264645 ITPR3Q14573 2671 aa10.04□□□□□ -0.8
CASC3-201ENST00000264645 Q8N377 158 aa10.03□□□□□ -0.8
CASC3-201ENST00000264645 OCR1Q9BZK8 76 aa10.03□□□□□ -0.8
CASC3-201ENST00000264645 ITPR1Q14643 2758 aa10.03□□□□□ -0.8
CASC3-201ENST00000264645 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.8
CASC3-201ENST00000264645 A0A0G2JQZ4 141 aa10.02□□□□□ -0.81
CASC3-201ENST00000264645 A0A1W2PNN7 141 aa10.02□□□□□ -0.81
CASC3-201ENST00000264645 C16orf95Q9H693 158 aa10.02□□□□□ -0.81
CASC3-201ENST00000264645 CD164Q04900 197 aa10.01□□□□□ -0.81
CASC3-201ENST00000264645 LOC400499M0QZD8 3231 aa10.01□□□□□ -0.81
CASC3-201ENST00000264645 SPTBN5Q9NRC6 3674 aaKnown RBP10.01□□□□□ -0.81
CASC3-201ENST00000264645 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
CASC3-201ENST00000264645 ZZEF1O43149 2961 aa9.99□□□□□ -0.81
CASC3-201ENST00000264645 EPM2AB3EWF7 344 aa9.99□□□□□ -0.81
CASC3-201ENST00000264645 FAM168BA1KXE4 195 aa9.98□□□□□ -0.81
CASC3-201ENST00000264645 A0A1W2PNM2 257 aa9.96□□□□□ -0.81
CASC3-201ENST00000264645 Q8NDZ9 215 aa9.96□□□□□ -0.81
CASC3-201ENST00000264645 C19orf73Q9NVV2 129 aa9.96□□□□□ -0.81
CASC3-201ENST00000264645 KCNQ1DNQ9H478 68 aa9.96□□□□□ -0.82
CASC3-201ENST00000264645 H3BPC8 53 aa9.96□□□□□ -0.82
CASC3-201ENST00000264645 COA5Q86WW8 74 aa9.96□□□□□ -0.82
CASC3-201ENST00000264645 WDFY3Q8IZQ1 3526 aa9.95□□□□□ -0.82
CASC3-201ENST00000264645 LINC01556Q5JQF7 62 aa9.95□□□□□ -0.82
CASC3-201ENST00000264645 PRR15Q8IV56 129 aa9.95□□□□□ -0.82
CASC3-201ENST00000264645 PRR34Q9NV39 138 aa9.95□□□□□ -0.82
CASC3-201ENST00000264645 DMXL1Q9Y485 3027 aa9.94□□□□□ -0.82
CASC3-201ENST00000264645 RETNLBQ9BQ08 111 aa9.94□□□□□ -0.82
CASC3-201ENST00000264645 Q8NAQ8 132 aa9.94□□□□□ -0.82
CASC3-201ENST00000264645 DCHS1Q96JQ0 3298 aa9.93□□□□□ -0.82
CASC3-201ENST00000264645 CYP4F30PQ9H0H9 118 aa9.93□□□□□ -0.82
CASC3-201ENST00000264645 MAST4O15021 2626 aa9.92□□□□□ -0.82
CASC3-201ENST00000264645 CFAP46Q8IYW2 2715 aa9.91□□□□□ -0.82
CASC3-201ENST00000264645 TNRC18O15417 2968 aaPredicted RBP9.91□□□□□ -0.82
CASC3-201ENST00000264645 KTN1-AS1Q86SY8 53 aa9.91□□□□□ -0.82
CASC3-201ENST00000264645 NOTCH1P46531 2555 aa9.9□□□□□ -0.82
CASC3-201ENST00000264645 LOC101927531A0A1B0GV80 90 aa9.89□□□□□ -0.83
CASC3-201ENST00000264645 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
CASC3-201ENST00000264645 ATP11AUNQ6ZP68 121 aa9.89□□□□□ -0.83
CASC3-201ENST00000264645 Q1T7F1 81 aa9.89□□□□□ -0.83
CASC3-201ENST00000264645 IGFL1Q6UW32 110 aa9.89□□□□□ -0.83
CASC3-201ENST00000264645 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
CASC3-201ENST00000264645 TP53AIP1Q9HCN2 124 aa9.88□□□□□ -0.83
CASC3-201ENST00000264645 LINC00612Q8N6U2 182 aa9.87□□□□□ -0.83
CASC3-201ENST00000264645 ZNF706Q9Y5V0 76 aaPredicted RBP9.87□□□□□ -0.83
CASC3-201ENST00000264645 IGLV1-50A0A075B6I6 118 aa9.87□□□□□ -0.83
CASC3-201ENST00000264645 COL12A1Q99715 3063 aa9.86□□□□□ -0.83
CASC3-201ENST00000264645 SPINK1P00995 79 aa9.86□□□□□ -0.83
CASC3-201ENST00000264645 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
CASC3-201ENST00000264645 A0A1B0GU69 56 aa9.86□□□□□ -0.83
CASC3-201ENST00000264645 TEX15Q9BXT5 2789 aa9.85□□□□□ -0.83
CASC3-201ENST00000264645 A8MWP4 228 aa9.85□□□□□ -0.83
CASC3-201ENST00000264645 IGLV5-48A0A075B6I7 105 aa9.84□□□□□ -0.83
CASC3-201ENST00000264645 DSCR10P59022 87 aa9.82□□□□□ -0.84
CASC3-201ENST00000264645 PHF5AQ7RTV0 110 aaKnown RBP9.82□□□□□ -0.84
CASC3-201ENST00000264645 K7ERS5 55 aa9.81□□□□□ -0.84
CASC3-201ENST00000264645 H3BNG1 76 aa9.8□□□□□ -0.84
CASC3-201ENST00000264645 ACYP2P14621 99 aa9.79□□□□□ -0.84
CASC3-201ENST00000264645 C7orf65Q6ZTY9 151 aa9.79□□□□□ -0.84
CASC3-201ENST00000264645 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
CASC3-201ENST00000264645 COL6A5A8TX70 2615 aa9.78□□□□□ -0.84
CASC3-201ENST00000264645 FLNCQ14315 2725 aa9.77□□□□□ -0.85
CASC3-201ENST00000264645 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
CASC3-201ENST00000264645 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
CASC3-201ENST00000264645 MOBPQ13875 183 aa9.76□□□□□ -0.85
CASC3-201ENST00000264645 UBR5O95071 2799 aaPredicted RBP9.76□□□□□ -0.85
CASC3-201ENST00000264645 RBM12B-AS1Q9P1G2 102 aa9.75□□□□□ -0.85
CASC3-201ENST00000264645 HELZ2Q9BYK8 2649 aaKnown RBP9.75□□□□□ -0.85
CASC3-201ENST00000264645 SPANXA2-OT1Q8N9U9 137 aa9.74□□□□□ -0.85
CASC3-201ENST00000264645 IGKV2D-30A0A075B6S6 120 aa9.74□□□□□ -0.85
CASC3-201ENST00000264645 IGKV2-30P06310 120 aa9.74□□□□□ -0.85
CASC3-201ENST00000264645 BAHCC1Q9P281 2608 aa9.73□□□□□ -0.85
CASC3-201ENST00000264645 LINC00588Q9Y4M8 146 aa9.73□□□□□ -0.85
CASC3-201ENST00000264645 LCA10Q71F78 164 aa9.71□□□□□ -0.85
CASC3-201ENST00000264645 Q8N9P0 234 aaPredicted RBP9.71□□□□□ -0.85
CASC3-201ENST00000264645 C16orf90A8MZG2 172 aa9.71□□□□□ -0.86
CASC3-201ENST00000264645 CDC42SE1Q9NRR8 79 aa9.71□□□□□ -0.86
CASC3-201ENST00000264645 ZANQ9Y493 2812 aa9.7□□□□□ -0.86
CASC3-201ENST00000264645 SETXQ7Z333 2677 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms