RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 TENM2Q9NT68 2774 aa13.78□□□□□ -0.2
SLC9A3R1-201ENST00000262613 TRAV23DV6A0A075B6W5 121 aa13.78□□□□□ -0.2
SLC9A3R1-201ENST00000262613 TGP01266 2768 aa13.78□□□□□ -0.2
SLC9A3R1-201ENST00000262613 KRTAP1-5Q9BYS1 174 aa13.78□□□□□ -0.2
SLC9A3R1-201ENST00000262613 BCE1O60756 84 aa13.77□□□□□ -0.21
SLC9A3R1-201ENST00000262613 DPH3Q96FX2 82 aa13.77□□□□□ -0.21
SLC9A3R1-201ENST00000262613 WWC2-AS2Q96NR7 200 aa13.76□□□□□ -0.21
SLC9A3R1-201ENST00000262613 LAMTOR3Q9UHA4 124 aa13.76□□□□□ -0.21
SLC9A3R1-201ENST00000262613 VPS13DQ5THJ4 4388 aa13.76□□□□□ -0.21
SLC9A3R1-201ENST00000262613 FAM19A5Q7Z5A7 132 aaPredicted RBP13.76□□□□□ -0.21
SLC9A3R1-201ENST00000262613 NDUFC2-KCTD14E9PQ53 114 aa13.75□□□□□ -0.21
SLC9A3R1-201ENST00000262613 PDE6GP18545 87 aa13.75□□□□□ -0.21
SLC9A3R1-201ENST00000262613 Q6ZQY7 126 aa13.74□□□□□ -0.21
SLC9A3R1-201ENST00000262613 M0R2N4 97 aa13.74□□□□□ -0.21
SLC9A3R1-201ENST00000262613 C6orf48Q9UBA6 75 aa13.74□□□□□ -0.21
SLC9A3R1-201ENST00000262613 C15orf56Q8N910 161 aa13.73□□□□□ -0.21
SLC9A3R1-201ENST00000262613 RMI2Q96E14 147 aa13.73□□□□□ -0.21
SLC9A3R1-201ENST00000262613 DIRC1Q969H9 104 aa13.72□□□□□ -0.21
SLC9A3R1-201ENST00000262613 HIGD2BQ4VC39 106 aa13.72□□□□□ -0.21
SLC9A3R1-201ENST00000262613 Q6ZVQ6 151 aa13.72□□□□□ -0.21
SLC9A3R1-201ENST00000262613 DSCR8Q96T75 97 aa13.72□□□□□ -0.21
SLC9A3R1-201ENST00000262613 LINC01547P58512 204 aaPredicted RBP13.71□□□□□ -0.21
SLC9A3R1-201ENST00000262613 CAMK2N2Q96S95 79 aa13.71□□□□□ -0.21
SLC9A3R1-201ENST00000262613 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.7□□□□□ -0.22
SLC9A3R1-201ENST00000262613 TRBV7-6A0A0J9YX20 115 aa13.69□□□□□ -0.22
SLC9A3R1-201ENST00000262613 F8WDY8 70 aa13.69□□□□□ -0.22
SLC9A3R1-201ENST00000262613 CASC10Q5T4H9 136 aa13.69□□□□□ -0.22
SLC9A3R1-201ENST00000262613 NBDYA0A0U1RRE5 68 aa13.68□□□□□ -0.22
SLC9A3R1-201ENST00000262613 CXCL6P80162 114 aa13.68□□□□□ -0.22
SLC9A3R1-201ENST00000262613 TRAV7A0A075B6U4 112 aa13.67□□□□□ -0.22
SLC9A3R1-201ENST00000262613 TRBV7-4A0A0J9YYF1 115 aa13.67□□□□□ -0.22
SLC9A3R1-201ENST00000262613 OXTP01178 125 aa13.67□□□□□ -0.22
SLC9A3R1-201ENST00000262613 COX7BP24311 80 aa13.67□□□□□ -0.22
SLC9A3R1-201ENST00000262613 ZNF73O43830 326 aaPredicted RBP13.66□□□□□ -0.22
SLC9A3R1-201ENST00000262613 ELOF1P60002 83 aaKnown RBP13.66□□□□□ -0.22
SLC9A3R1-201ENST00000262613 Q6ZRU5 148 aa13.65□□□□□ -0.22
SLC9A3R1-201ENST00000262613 XAGE1AQ9HD64 81 aa13.65□□□□□ -0.22
SLC9A3R1-201ENST00000262613 VPREB1P12018 145 aa13.63□□□□□ -0.23
SLC9A3R1-201ENST00000262613 C20orf197Q8N268 126 aa13.63□□□□□ -0.23
SLC9A3R1-201ENST00000262613 HAMPP81172 84 aa13.63□□□□□ -0.23
SLC9A3R1-201ENST00000262613 DNAH10Q8IVF4 4471 aa13.61□□□□□ -0.23
SLC9A3R1-201ENST00000262613 C5orf47Q569G3 176 aa13.6□□□□□ -0.23
SLC9A3R1-201ENST00000262613 C3orf84H3BNL1 204 aa13.59□□□□□ -0.23
SLC9A3R1-201ENST00000262613 SYCNQ0VAF6 134 aa13.59□□□□□ -0.23
SLC9A3R1-201ENST00000262613 M0R378 163 aa13.58□□□□□ -0.24
SLC9A3R1-201ENST00000262613 FAM236DA0A1B0GTK5 79 aa13.56□□□□□ -0.24
SLC9A3R1-201ENST00000262613 FAM236CP0DP71 79 aa13.56□□□□□ -0.24
SLC9A3R1-201ENST00000262613 KLKP1Q107X0 134 aa13.56□□□□□ -0.24
SLC9A3R1-201ENST00000262613 H7BZZ5 65 aa13.56□□□□□ -0.24
SLC9A3R1-201ENST00000262613 PSCAO43653 123 aa13.56□□□□□ -0.24
SLC9A3R1-201ENST00000262613 LINC00528Q8N1L1 170 aa13.56□□□□□ -0.24
SLC9A3R1-201ENST00000262613 ALMS1Q8TCU4 4167 aa13.56□□□□□ -0.24
SLC9A3R1-201ENST00000262613 Q6ZRN7 208 aaPredicted RBP13.54□□□□□ -0.24
SLC9A3R1-201ENST00000262613 DNAH6Q9C0G6 4158 aa13.54□□□□□ -0.24
SLC9A3R1-201ENST00000262613 Q6ZR54 194 aa13.54□□□□□ -0.24
SLC9A3R1-201ENST00000262613 LINC00476Q8WZB0 136 aa13.54□□□□□ -0.24
SLC9A3R1-201ENST00000262613 KMT2AQ03164 3969 aa13.53□□□□□ -0.24
SLC9A3R1-201ENST00000262613 EPM2AB3EWF7 344 aa13.52□□□□□ -0.24
SLC9A3R1-201ENST00000262613 LY6G6CO95867 125 aa13.52□□□□□ -0.24
SLC9A3R1-201ENST00000262613 Q5XG85 94 aa13.51□□□□□ -0.25
SLC9A3R1-201ENST00000262613 Q6ZRP5 223 aa13.51□□□□□ -0.25
SLC9A3R1-201ENST00000262613 TLX1NBP0CAT3 122 aa13.49□□□□□ -0.25
SLC9A3R1-201ENST00000262613 LRCOL1A6NCL2 159 aa13.47□□□□□ -0.25
SLC9A3R1-201ENST00000262613 SCXQ7RTU7 201 aa13.47□□□□□ -0.25
SLC9A3R1-201ENST00000262613 SERP1Q9Y6X1 66 aa13.47□□□□□ -0.25
SLC9A3R1-201ENST00000262613 C14orf177Q52M58 125 aa13.45□□□□□ -0.26
SLC9A3R1-201ENST00000262613 DNAH2Q9P225 4427 aa13.43□□□□□ -0.26
SLC9A3R1-201ENST00000262613 CNBPP62633 177 aaKnown RBP13.42□□□□□ -0.26
SLC9A3R1-201ENST00000262613 SNURFQ9Y675 71 aa13.42□□□□□ -0.26
SLC9A3R1-201ENST00000262613 NDUFC1O43677 76 aa13.41□□□□□ -0.26
SLC9A3R1-201ENST00000262613 C4orf26Q17RF5 130 aa13.41□□□□□ -0.26
SLC9A3R1-201ENST00000262613 KCNQ1DNQ9H478 68 aa13.4□□□□□ -0.26
SLC9A3R1-201ENST00000262613 PLA2G2DQ9UNK4 145 aa13.4□□□□□ -0.26
SLC9A3R1-201ENST00000262613 NREPQ16612 68 aa13.4□□□□□ -0.27
SLC9A3R1-201ENST00000262613 ERC2-IT1O76042 136 aa13.39□□□□□ -0.27
SLC9A3R1-201ENST00000262613 IGKV4-1P06312 121 aa13.39□□□□□ -0.27
SLC9A3R1-201ENST00000262613 F8WEM9 126 aa13.38□□□□□ -0.27
SLC9A3R1-201ENST00000262613 C1orf134Q5TEV5 83 aa13.38□□□□□ -0.27
SLC9A3R1-201ENST00000262613 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.38□□□□□ -0.27
SLC9A3R1-201ENST00000262613 NKAPP1Q8N9T2 125 aa13.38□□□□□ -0.27
SLC9A3R1-201ENST00000262613 BPY2O14599 106 aa13.37□□□□□ -0.27
SLC9A3R1-201ENST00000262613 A0A087WTM6 91 aa13.35□□□□□ -0.27
SLC9A3R1-201ENST00000262613 SERTAD4-AS1Q5TG53 156 aa13.35□□□□□ -0.27
SLC9A3R1-201ENST00000262613 ATP5EP56381 51 aaPredicted RBP13.34□□□□□ -0.27
SLC9A3R1-201ENST00000262613 HRCT1Q6UXD1 115 aa13.34□□□□□ -0.27
SLC9A3R1-201ENST00000262613 IGLV5-48A0A075B6I7 105 aa13.34□□□□□ -0.27
SLC9A3R1-201ENST00000262613 C7orf33Q8WU49 177 aa13.34□□□□□ -0.27
SLC9A3R1-201ENST00000262613 Q8N377 158 aa13.33□□□□□ -0.28
SLC9A3R1-201ENST00000262613 IGLV5-37A0A075B6J1 123 aa13.32□□□□□ -0.28
SLC9A3R1-201ENST00000262613 DNAH17Q9UFH2 4485 aa13.31□□□□□ -0.28
SLC9A3R1-201ENST00000262613 Q8N9L7 120 aa13.31□□□□□ -0.28
SLC9A3R1-201ENST00000262613 TMEM254Q8TBM7 123 aa13.31□□□□□ -0.28
SLC9A3R1-201ENST00000262613 A0A1B0GW54 56 aa13.3□□□□□ -0.28
SLC9A3R1-201ENST00000262613 OCR1Q9BZK8 76 aa13.3□□□□□ -0.28
SLC9A3R1-201ENST00000262613 HYDINQ4G0P3 5121 aa13.3□□□□□ -0.28
SLC9A3R1-201ENST00000262613 FRAS1Q86XX4 4008 aa13.29□□□□□ -0.28
SLC9A3R1-201ENST00000262613 C9orf163Q8N9P6 203 aa13.29□□□□□ -0.28
SLC9A3R1-201ENST00000262613 DHRS4-AS1Q9P1J3 65 aa13.29□□□□□ -0.28
SLC9A3R1-201ENST00000262613 FAM168BA1KXE4 195 aa13.27□□□□□ -0.29
SLC9A3R1-201ENST00000262613 KRTAP4-16G5E9R7 235 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms