RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 HIGD2BQ4VC39 106 aa9.69□□□□□ -0.86
FOXF1-201ENST00000262426 UNQ6190/PRO20217Q6UXQ8 127 aa9.68□□□□□ -0.86
FOXF1-201ENST00000262426 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
FOXF1-201ENST00000262426 LINC01547P58512 204 aaPredicted RBP9.68□□□□□ -0.86
FOXF1-201ENST00000262426 KIAA0087Q14695 138 aa9.68□□□□□ -0.86
FOXF1-201ENST00000262426 PRR4Q16378 134 aa9.67□□□□□ -0.86
FOXF1-201ENST00000262426 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
FOXF1-201ENST00000262426 OBSCN-AS1Q96MR7 158 aa9.66□□□□□ -0.86
FOXF1-201ENST00000262426 IGKV2D-24A0A075B6R9 120 aa9.65□□□□□ -0.86
FOXF1-201ENST00000262426 C6orf99Q4VX62 202 aa9.65□□□□□ -0.86
FOXF1-201ENST00000262426 DNAH7Q8WXX0 4024 aa9.65□□□□□ -0.86
FOXF1-201ENST00000262426 SPAG11BQ08648 103 aa9.65□□□□□ -0.86
FOXF1-201ENST00000262426 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.65□□□□□ -0.86
FOXF1-201ENST00000262426 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.86
FOXF1-201ENST00000262426 Q8IZM0 81 aa9.65□□□□□ -0.87
FOXF1-201ENST00000262426 H3BNG1 76 aa9.64□□□□□ -0.87
FOXF1-201ENST00000262426 Q8N814 137 aa9.64□□□□□ -0.87
FOXF1-201ENST00000262426 PSPHP1O15172 72 aa9.64□□□□□ -0.87
FOXF1-201ENST00000262426 DNAH10Q8IVF4 4471 aa9.64□□□□□ -0.87
FOXF1-201ENST00000262426 Q6ZVQ6 151 aa9.63□□□□□ -0.87
FOXF1-201ENST00000262426 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
FOXF1-201ENST00000262426 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
FOXF1-201ENST00000262426 CASC10Q5T4H9 136 aa9.6□□□□□ -0.87
FOXF1-201ENST00000262426 TMEM256-PLSCR3K7ERE1 68 aa9.6□□□□□ -0.87
FOXF1-201ENST00000262426 Q8NDZ9 215 aa9.6□□□□□ -0.87
FOXF1-201ENST00000262426 XAGE1AQ9HD64 81 aa9.59□□□□□ -0.87
FOXF1-201ENST00000262426 KLKP1Q107X0 134 aa9.59□□□□□ -0.87
FOXF1-201ENST00000262426 NREPQ16612 68 aa9.59□□□□□ -0.87
FOXF1-201ENST00000262426 ATP5EP2Q5VTU8 51 aa9.58□□□□□ -0.88
FOXF1-201ENST00000262426 PLECQ15149 4684 aaKnown RBP9.58□□□□□ -0.88
FOXF1-201ENST00000262426 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
FOXF1-201ENST00000262426 HIGD2AQ9BW72 106 aa9.58□□□□□ -0.88
FOXF1-201ENST00000262426 KRTAP26-1Q6PEX3 210 aa9.57□□□□□ -0.88
FOXF1-201ENST00000262426 FBN3Q75N90 2809 aa9.57□□□□□ -0.88
FOXF1-201ENST00000262426 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
FOXF1-201ENST00000262426 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
FOXF1-201ENST00000262426 BPY2O14599 106 aa9.56□□□□□ -0.88
FOXF1-201ENST00000262426 Q6ZQY7 126 aa9.56□□□□□ -0.88
FOXF1-201ENST00000262426 A8MU10 97 aa9.56□□□□□ -0.88
FOXF1-201ENST00000262426 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
FOXF1-201ENST00000262426 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
FOXF1-201ENST00000262426 Q6ZQT0 140 aa9.55□□□□□ -0.88
FOXF1-201ENST00000262426 CAMK2N2Q96S95 79 aa9.55□□□□□ -0.88
FOXF1-201ENST00000262426 C15orf56Q8N910 161 aa9.55□□□□□ -0.88
FOXF1-201ENST00000262426 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.88
FOXF1-201ENST00000262426 Q6ZRU5 148 aa9.54□□□□□ -0.88
FOXF1-201ENST00000262426 B9D2Q9BPU9 175 aa9.54□□□□□ -0.88
FOXF1-201ENST00000262426 STARD9Q9P2P6 4700 aa9.53□□□□□ -0.88
FOXF1-201ENST00000262426 PMAIP1Q13794 54 aa9.53□□□□□ -0.88
FOXF1-201ENST00000262426 DNAH10OSP0CZ25 163 aa9.52□□□□□ -0.88
FOXF1-201ENST00000262426 C3orf84H3BNL1 204 aa9.52□□□□□ -0.89
FOXF1-201ENST00000262426 FAM30AQ9NZY2 134 aa9.52□□□□□ -0.89
FOXF1-201ENST00000262426 KRTAP1-5Q9BYS1 174 aa9.51□□□□□ -0.89
FOXF1-201ENST00000262426 DNAH1Q9P2D7 4330 aa9.5□□□□□ -0.89
FOXF1-201ENST00000262426 TRBV7-4A0A0J9YYF1 115 aa9.5□□□□□ -0.89
FOXF1-201ENST00000262426 UBE2DNLQ8IWF7 75 aa9.49□□□□□ -0.89
FOXF1-201ENST00000262426 PRYO14603 147 aa9.48□□□□□ -0.89
FOXF1-201ENST00000262426 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.9
FOXF1-201ENST00000262426 COX17Q14061 63 aa9.46□□□□□ -0.9
FOXF1-201ENST00000262426 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
FOXF1-201ENST00000262426 MUC7Q8TAX7 377 aa9.45□□□□□ -0.9
FOXF1-201ENST00000262426 LINC00575Q6W349 94 aa9.44□□□□□ -0.9
FOXF1-201ENST00000262426 Q6ZRP5 223 aa9.44□□□□□ -0.9
FOXF1-201ENST00000262426 SPTSSBQ8NFR3 76 aa9.44□□□□□ -0.9
FOXF1-201ENST00000262426 DEFB105AQ8NG35 78 aa9.43□□□□□ -0.9
FOXF1-201ENST00000262426 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
FOXF1-201ENST00000262426 KMT2AQ03164 3969 aa9.41□□□□□ -0.9
FOXF1-201ENST00000262426 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.4□□□□□ -0.9
FOXF1-201ENST00000262426 NDUFC1O43677 76 aa9.4□□□□□ -0.9
FOXF1-201ENST00000262426 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
FOXF1-201ENST00000262426 PSCAO43653 123 aa9.39□□□□□ -0.91
FOXF1-201ENST00000262426 FAM168BA1KXE4 195 aa9.38□□□□□ -0.91
FOXF1-201ENST00000262426 A8MUN3 132 aa9.38□□□□□ -0.91
FOXF1-201ENST00000262426 LINC00167Q96N53 147 aa9.38□□□□□ -0.91
FOXF1-201ENST00000262426 DEFB116Q30KQ4 102 aa9.38□□□□□ -0.91
FOXF1-201ENST00000262426 SMIM29Q86T20 159 aa9.38□□□□□ -0.91
FOXF1-201ENST00000262426 C1orf64Q8NEQ6 169 aa9.37□□□□□ -0.91
FOXF1-201ENST00000262426 CXCL6P80162 114 aa9.36□□□□□ -0.91
FOXF1-201ENST00000262426 KRTAP21-3Q3LHN1 58 aa9.36□□□□□ -0.91
FOXF1-201ENST00000262426 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
FOXF1-201ENST00000262426 DYNC2H1Q8NCM8 4307 aaKnown RBP9.35□□□□□ -0.91
FOXF1-201ENST00000262426 ATP5EP56381 51 aaPredicted RBP9.34□□□□□ -0.91
FOXF1-201ENST00000262426 LOC110117498A0A087WWA1 95 aa9.34□□□□□ -0.91
FOXF1-201ENST00000262426 VPREB1P12018 145 aa9.34□□□□□ -0.91
FOXF1-201ENST00000262426 TRAV22A0A0B4J277 110 aa9.33□□□□□ -0.92
FOXF1-201ENST00000262426 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
FOXF1-201ENST00000262426 RPL37AP8A6NKH3 93 aa9.33□□□□□ -0.92
FOXF1-201ENST00000262426 IGKV4-1P06312 121 aa9.33□□□□□ -0.92
FOXF1-201ENST00000262426 NUPR2A6NF83 97 aa9.31□□□□□ -0.92
FOXF1-201ENST00000262426 IGLV6-57P01721 117 aa9.3□□□□□ -0.92
FOXF1-201ENST00000262426 OCR1Q9BZK8 76 aa9.3□□□□□ -0.92
FOXF1-201ENST00000262426 PRR15Q8IV56 129 aa9.3□□□□□ -0.92
FOXF1-201ENST00000262426 hDV103S1A0JD37 113 aa9.3□□□□□ -0.92
FOXF1-201ENST00000262426 SRRM2Q9UQ35 2752 aaKnown RBP9.29□□□□□ -0.92
FOXF1-201ENST00000262426 MRPL55Q7Z7F7 128 aaKnown RBP9.29□□□□□ -0.92
FOXF1-201ENST00000262426 DIRC1Q969H9 104 aa9.29□□□□□ -0.92
FOXF1-201ENST00000262426 NBDYA0A0U1RRE5 68 aa9.27□□□□□ -0.92
FOXF1-201ENST00000262426 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.92
FOXF1-201ENST00000262426 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.92
FOXF1-201ENST00000262426 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms