RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 HIST2H2BEQ16778 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-202ENST00000262396 Q6ZRX8 168 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BHQ93079 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BNQ99877 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BMQ99879 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 ERC2-IT1O76042 136 aa6.92□□□□□ -1.3
TRAF4-202ENST00000262396 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
TRAF4-202ENST00000262396 OR13C6PQ8NH95 151 aa6.92□□□□□ -1.3
TRAF4-202ENST00000262396 MUC17Q685J3 4493 aa6.92□□□□□ -1.3
TRAF4-202ENST00000262396 NDUFC2O95298 119 aa6.91□□□□□ -1.3
TRAF4-202ENST00000262396 LOC107984156A0A0G2JMH3 177 aa6.9□□□□□ -1.3
TRAF4-202ENST00000262396 ZNF73O43830 326 aaPredicted RBP6.9□□□□□ -1.3
TRAF4-202ENST00000262396 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
TRAF4-202ENST00000262396 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
TRAF4-202ENST00000262396 ARL17AQ8IVW1 177 aa6.9□□□□□ -1.3
TRAF4-202ENST00000262396 Q9BRP9 147 aa6.9□□□□□ -1.3
TRAF4-202ENST00000262396 IGLV6-57P01721 117 aa6.89□□□□□ -1.31
TRAF4-202ENST00000262396 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
TRAF4-202ENST00000262396 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
TRAF4-202ENST00000262396 LINC00310P59036 64 aa6.88□□□□□ -1.31
TRAF4-202ENST00000262396 Q8N377 158 aa6.88□□□□□ -1.31
TRAF4-202ENST00000262396 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
TRAF4-202ENST00000262396 S100A6P06703 90 aa6.86□□□□□ -1.31
TRAF4-202ENST00000262396 COA6Q5JTJ3 125 aaKnown RBP6.86□□□□□ -1.31
TRAF4-202ENST00000262396 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
TRAF4-202ENST00000262396 ST20-AS1Q8NBB2 130 aa6.86□□□□□ -1.31
TRAF4-202ENST00000262396 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
TRAF4-202ENST00000262396 E9PLD3 99 aa6.85□□□□□ -1.31
TRAF4-202ENST00000262396 LAMTOR3Q9UHA4 124 aa6.85□□□□□ -1.31
TRAF4-202ENST00000262396 C5orf52A6NGY3 159 aa6.84□□□□□ -1.31
TRAF4-202ENST00000262396 TAL2Q16559 108 aa6.84□□□□□ -1.31
TRAF4-202ENST00000262396 ADAMTSL4-AS1Q5T5F5 129 aa6.84□□□□□ -1.31
TRAF4-202ENST00000262396 SPANXCQ9NY87 97 aa6.84□□□□□ -1.31
TRAF4-202ENST00000262396 DHRS4-AS1Q9P1J3 65 aa6.84□□□□□ -1.31
TRAF4-202ENST00000262396 S100A2P29034 98 aa6.83□□□□□ -1.32
TRAF4-202ENST00000262396 SOSTDC1Q6X4U4 206 aa6.83□□□□□ -1.32
TRAF4-202ENST00000262396 DEFB105AQ8NG35 78 aa6.82□□□□□ -1.32
TRAF4-202ENST00000262396 LINC00308Q8TCZ7 52 aa6.82□□□□□ -1.32
TRAF4-202ENST00000262396 C20orf202A1L168 122 aa6.81□□□□□ -1.32
TRAF4-202ENST00000262396 ZNF815PA8K554 130 aa6.81□□□□□ -1.32
TRAF4-202ENST00000262396 COX7BP24311 80 aa6.81□□□□□ -1.32
TRAF4-202ENST00000262396 LINC00518Q8N0U6 118 aa6.81□□□□□ -1.32
TRAF4-202ENST00000262396 SPANXDQ9BXN6 97 aa6.81□□□□□ -1.32
TRAF4-202ENST00000262396 SYS1-DBNDD2H3BUS1 97 aa6.8□□□□□ -1.32
TRAF4-202ENST00000262396 AKR1D1P51857 326 aa6.8□□□□□ -1.32
TRAF4-202ENST00000262396 PET117Q6UWS5 81 aa6.8□□□□□ -1.32
TRAF4-202ENST00000262396 TMA7Q9Y2S6 64 aaKnown RBP6.8□□□□□ -1.32
TRAF4-202ENST00000262396 TIMM17BO60830 172 aa6.79□□□□□ -1.32
TRAF4-202ENST00000262396 KRTDAPP60985 99 aa6.79□□□□□ -1.32
TRAF4-202ENST00000262396 XP32Q5T750 250 aa6.79□□□□□ -1.32
TRAF4-202ENST00000262396 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
TRAF4-202ENST00000262396 COPS9Q8WXC6 57 aa6.79□□□□□ -1.32
TRAF4-202ENST00000262396 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
TRAF4-202ENST00000262396 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
TRAF4-202ENST00000262396 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-202ENST00000262396 Q1RN00 199 aa6.78□□□□□ -1.32
TRAF4-202ENST00000262396 C3orf79P0CE67 100 aa6.77□□□□□ -1.33
TRAF4-202ENST00000262396 C6orf99Q4VX62 202 aa6.77□□□□□ -1.33
TRAF4-202ENST00000262396 PRO1933Q9H354 126 aa6.77□□□□□ -1.33
TRAF4-202ENST00000262396 A6NDN8 102 aa6.76□□□□□ -1.33
TRAF4-202ENST00000262396 H7C2G1 150 aa6.76□□□□□ -1.33
TRAF4-202ENST00000262396 LINC01545Q5VT33 79 aa6.76□□□□□ -1.33
TRAF4-202ENST00000262396 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
TRAF4-202ENST00000262396 TEX49A0A1B0GTD5 131 aa6.75□□□□□ -1.33
TRAF4-202ENST00000262396 SPRR1BP22528 89 aa6.75□□□□□ -1.33
TRAF4-202ENST00000262396 ELOF1P60002 83 aaKnown RBP6.75□□□□□ -1.33
TRAF4-202ENST00000262396 IGLV8-61A0A075B6I0 122 aa6.74□□□□□ -1.33
TRAF4-202ENST00000262396 SNRPEP62304 92 aaKnown RBP6.74□□□□□ -1.33
TRAF4-202ENST00000262396 HIST1H2BLQ99880 126 aa6.74□□□□□ -1.33
TRAF4-202ENST00000262396 KRTAP4-1Q9BYQ7 146 aa6.74□□□□□ -1.33
TRAF4-202ENST00000262396 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
TRAF4-202ENST00000262396 LITAFQ99732 161 aa6.73□□□□□ -1.33
TRAF4-202ENST00000262396 TTTY13Q9BZ97 58 aa6.73□□□□□ -1.33
TRAF4-202ENST00000262396 A0A1B0GWB2 263 aa6.71□□□□□ -1.34
TRAF4-202ENST00000262396 CD164Q04900 197 aa6.71□□□□□ -1.34
TRAF4-202ENST00000262396 NHP2Q9NX24 153 aaKnown RBP6.71□□□□□ -1.34
TRAF4-202ENST00000262396 IFITM1P13164 125 aa6.7□□□□□ -1.34
TRAF4-202ENST00000262396 TRBV7-6A0A0J9YX20 115 aa6.69□□□□□ -1.34
TRAF4-202ENST00000262396 HSBP1L1C9JCN9 74 aa6.69□□□□□ -1.34
TRAF4-202ENST00000262396 F8WEM9 126 aa6.69□□□□□ -1.34
TRAF4-202ENST00000262396 A4D1N5 150 aa6.68□□□□□ -1.34
TRAF4-202ENST00000262396 TRAV13-2A0A0B4J235 113 aa6.67□□□□□ -1.34
TRAF4-202ENST00000262396 TCL1BO95988 128 aa6.67□□□□□ -1.34
TRAF4-202ENST00000262396 VAMP3Q15836 100 aa6.67□□□□□ -1.34
TRAF4-202ENST00000262396 Q6ZVH6 145 aa6.67□□□□□ -1.34
TRAF4-202ENST00000262396 SCGB1D1O95968 90 aa6.66□□□□□ -1.34
TRAF4-202ENST00000262396 COX6B2Q6YFQ2 88 aa6.66□□□□□ -1.34
TRAF4-202ENST00000262396 MUSTN1Q8IVN3 82 aa6.66□□□□□ -1.34
TRAF4-202ENST00000262396 ATOH7Q8N100 152 aa6.66□□□□□ -1.34
TRAF4-202ENST00000262396 M0R2T5 61 aa6.65□□□□□ -1.34
TRAF4-202ENST00000262396 CFC1BP0CG36 223 aa6.65□□□□□ -1.34
TRAF4-202ENST00000262396 LOC105371267A0A1B0GV96 52 aa6.63□□□□□ -1.35
TRAF4-202ENST00000262396 ANKRD39Q53RE8 183 aa6.63□□□□□ -1.35
TRAF4-202ENST00000262396 LCE2DQ5TA82 110 aaPredicted RBP6.63□□□□□ -1.35
TRAF4-202ENST00000262396 C1orf195Q5TG92 126 aa6.63□□□□□ -1.35
TRAF4-202ENST00000262396 IGLV5-48A0A075B6I7 105 aa6.62□□□□□ -1.35
TRAF4-202ENST00000262396 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
TRAF4-202ENST00000262396 Q5XG85 94 aa6.62□□□□□ -1.35
TRAF4-202ENST00000262396 SMIM29Q86T20 159 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms