RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 NDUFC2-KCTD14E9PQ53 114 aa8.92□□□□□ -0.98
VMP1-201ENST00000262291 SERP1Q9Y6X1 66 aa8.92□□□□□ -0.98
VMP1-201ENST00000262291 H0YGX0 51 aa8.92□□□□□ -0.98
VMP1-201ENST00000262291 Q6ZRP5 223 aa8.91□□□□□ -0.98
VMP1-201ENST00000262291 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
VMP1-201ENST00000262291 SYCNQ0VAF6 134 aa8.91□□□□□ -0.98
VMP1-201ENST00000262291 BRK1Q8WUW1 75 aa8.91□□□□□ -0.98
VMP1-201ENST00000262291 B9D2Q9BPU9 175 aa8.91□□□□□ -0.98
VMP1-201ENST00000262291 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
VMP1-201ENST00000262291 DNHD1Q96M86 4753 aa8.9□□□□□ -0.98
VMP1-201ENST00000262291 DNAH10Q8IVF4 4471 aa8.9□□□□□ -0.98
VMP1-201ENST00000262291 F8WEM9 126 aa8.89□□□□□ -0.99
VMP1-201ENST00000262291 UBE2DNLQ8IWF7 75 aa8.89□□□□□ -0.99
VMP1-201ENST00000262291 DNAH7Q8WXX0 4024 aa8.89□□□□□ -0.99
VMP1-201ENST00000262291 PRKDCP78527 4128 aaKnown RBP8.88□□□□□ -0.99
VMP1-201ENST00000262291 DNAH1Q9P2D7 4330 aa8.88□□□□□ -0.99
VMP1-201ENST00000262291 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
VMP1-201ENST00000262291 RBM3P98179 157 aaKnown RBP8.88□□□□□ -0.99
VMP1-201ENST00000262291 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
VMP1-201ENST00000262291 MEGF8Q7Z7M0 2845 aa8.87□□□□□ -0.99
VMP1-201ENST00000262291 VPREB1P12018 145 aa8.86□□□□□ -0.99
VMP1-201ENST00000262291 HAMPP81172 84 aa8.86□□□□□ -0.99
VMP1-201ENST00000262291 APLNQ9ULZ1 77 aa8.86□□□□□ -0.99
VMP1-201ENST00000262291 M0R2N4 97 aa8.86□□□□□ -0.99
VMP1-201ENST00000262291 IGLV6-57P01721 117 aa8.86□□□□□ -0.99
VMP1-201ENST00000262291 ATP5EP2Q5VTU8 51 aa8.85□□□□□ -0.99
VMP1-201ENST00000262291 Q8N814 137 aa8.85□□□□□ -0.99
VMP1-201ENST00000262291 SMIM26A0A096LP01 95 aa8.84□□□□□ -0.99
VMP1-201ENST00000262291 FAM168BA1KXE4 195 aa8.84□□□□□ -0.99
VMP1-201ENST00000262291 F8WDY8 70 aa8.84□□□□□ -0.99
VMP1-201ENST00000262291 MPLKIPQ8TAP9 179 aa8.84□□□□□ -0.99
VMP1-201ENST00000262291 TRAV7A0A075B6U4 112 aa8.84□□□□□ -0.99
VMP1-201ENST00000262291 SERTAD4-AS1Q5TG53 156 aa8.84□□□□□ -0.99
VMP1-201ENST00000262291 TRBV7-6A0A0J9YX20 115 aa8.83□□□□□ -1
VMP1-201ENST00000262291 PLECQ15149 4684 aaKnown RBP8.83□□□□□ -1
VMP1-201ENST00000262291 JMJD7-PLA2G4BH0Y9G9 81 aa8.82□□□□□ -1
VMP1-201ENST00000262291 SCXQ7RTU7 201 aa8.82□□□□□ -1
VMP1-201ENST00000262291 MUC7Q8TAX7 377 aa8.82□□□□□ -1
VMP1-201ENST00000262291 KLKP1Q107X0 134 aa8.81□□□□□ -1
VMP1-201ENST00000262291 LINC00575Q6W349 94 aa8.81□□□□□ -1
VMP1-201ENST00000262291 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
VMP1-201ENST00000262291 SEC61GP60059 68 aa8.81□□□□□ -1
VMP1-201ENST00000262291 FAM229BQ4G0N7 80 aa8.81□□□□□ -1
VMP1-201ENST00000262291 C1orf195Q5TG92 126 aa8.81□□□□□ -1
VMP1-201ENST00000262291 PSCAO43653 123 aa8.8□□□□□ -1
VMP1-201ENST00000262291 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.8□□□□□ -1
VMP1-201ENST00000262291 RPL37AP8A6NKH3 93 aa8.8□□□□□ -1
VMP1-201ENST00000262291 ZNF73O43830 326 aaPredicted RBP8.8□□□□□ -1
VMP1-201ENST00000262291 TMEM256-PLSCR3K7ERE1 68 aa8.79□□□□□ -1
VMP1-201ENST00000262291 M0R378 163 aa8.79□□□□□ -1
VMP1-201ENST00000262291 DIRC1Q969H9 104 aa8.79□□□□□ -1
VMP1-201ENST00000262291 V9GYY9 64 aa8.79□□□□□ -1
VMP1-201ENST00000262291 STARD9Q9P2P6 4700 aa8.78□□□□□ -1
VMP1-201ENST00000262291 NKAPP1Q8N9T2 125 aa8.78□□□□□ -1
VMP1-201ENST00000262291 Q6ZQY7 126 aa8.77□□□□□ -1.01
VMP1-201ENST00000262291 C7orf33Q8WU49 177 aa8.77□□□□□ -1.01
VMP1-201ENST00000262291 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1.01
VMP1-201ENST00000262291 Q6ZVQ6 151 aa8.76□□□□□ -1.01
VMP1-201ENST00000262291 COX7BP24311 80 aa8.76□□□□□ -1.01
VMP1-201ENST00000262291 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
VMP1-201ENST00000262291 Q6ZQT0 140 aa8.75□□□□□ -1.01
VMP1-201ENST00000262291 KRTAP7-1Q8IUC3 87 aa8.75□□□□□ -1.01
VMP1-201ENST00000262291 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
VMP1-201ENST00000262291 DYNC2H1Q8NCM8 4307 aaKnown RBP8.75□□□□□ -1.01
VMP1-201ENST00000262291 TGP01266 2768 aa8.73□□□□□ -1.01
VMP1-201ENST00000262291 NUPR2A6NF83 97 aa8.73□□□□□ -1.01
VMP1-201ENST00000262291 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
VMP1-201ENST00000262291 ELOF1P60002 83 aaKnown RBP8.72□□□□□ -1.01
VMP1-201ENST00000262291 TLX1NBP0CAT3 122 aa8.71□□□□□ -1.01
VMP1-201ENST00000262291 A0A096LNI7 61 aa8.7□□□□□ -1.02
VMP1-201ENST00000262291 TRBV7-4A0A0J9YYF1 115 aa8.7□□□□□ -1.02
VMP1-201ENST00000262291 NBDYA0A0U1RRE5 68 aa8.7□□□□□ -1.02
VMP1-201ENST00000262291 Q8N9L7 120 aa8.7□□□□□ -1.02
VMP1-201ENST00000262291 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
VMP1-201ENST00000262291 TMEM254Q8TBM7 123 aa8.69□□□□□ -1.02
VMP1-201ENST00000262291 LRCOL1A6NCL2 159 aa8.68□□□□□ -1.02
VMP1-201ENST00000262291 NREPQ16612 68 aa8.68□□□□□ -1.02
VMP1-201ENST00000262291 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
VMP1-201ENST00000262291 DEFB105AQ8NG35 78 aa8.68□□□□□ -1.02
VMP1-201ENST00000262291 FBN3Q75N90 2809 aa8.68□□□□□ -1.02
VMP1-201ENST00000262291 KCNQ1DNQ9H478 68 aa8.67□□□□□ -1.02
VMP1-201ENST00000262291 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
VMP1-201ENST00000262291 BCE1O60756 84 aa8.66□□□□□ -1.02
VMP1-201ENST00000262291 MRPL55Q7Z7F7 128 aaKnown RBP8.66□□□□□ -1.02
VMP1-201ENST00000262291 IGLV1-50A0A075B6I6 118 aa8.65□□□□□ -1.02
VMP1-201ENST00000262291 BPY2O14599 106 aa8.65□□□□□ -1.02
VMP1-201ENST00000262291 NDUFC1O43677 76 aa8.65□□□□□ -1.03
VMP1-201ENST00000262291 LOC110117498A0A087WWA1 95 aa8.64□□□□□ -1.03
VMP1-201ENST00000262291 KMT2AQ03164 3969 aa8.64□□□□□ -1.03
VMP1-201ENST00000262291 CXCL6P80162 114 aa8.63□□□□□ -1.03
VMP1-201ENST00000262291 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.63□□□□□ -1.03
VMP1-201ENST00000262291 PLA2G2DQ9UNK4 145 aa8.63□□□□□ -1.03
VMP1-201ENST00000262291 CNBPP62633 177 aaKnown RBP8.62□□□□□ -1.03
VMP1-201ENST00000262291 Q9BRP9 147 aa8.62□□□□□ -1.03
VMP1-201ENST00000262291 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
VMP1-201ENST00000262291 ETDCA0A1B0GVM5 59 aa8.62□□□□□ -1.03
VMP1-201ENST00000262291 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
VMP1-201ENST00000262291 ST20-AS1Q8NBB2 130 aa8.62□□□□□ -1.03
VMP1-201ENST00000262291 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
VMP1-201ENST00000262291 ATP5EP56381 51 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms