RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 C22orf24Q9Y442 160 aa18.01■□□□□ 0.47
SMARCD3-201ENST00000262188 C1orf195Q5TG92 126 aa18■□□□□ 0.47
SMARCD3-201ENST00000262188 FAT2Q9NYQ8 4349 aa17.99■□□□□ 0.47
SMARCD3-201ENST00000262188 FUSP35637 526 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMARCD3-201ENST00000262188 CIRBPQ14011 172 aaKnown RBP17.99■□□□□ 0.47
SMARCD3-201ENST00000262188 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.97■□□□□ 0.47
SMARCD3-201ENST00000262188 A0A087WTM6 91 aa17.97■□□□□ 0.47
SMARCD3-201ENST00000262188 GVQW2A0A096LPI5 108 aaPredicted RBP17.97■□□□□ 0.47
SMARCD3-201ENST00000262188 OBSCN-AS1Q96MR7 158 aa17.97■□□□□ 0.47
SMARCD3-201ENST00000262188 C6orf226Q5I0X4 101 aa17.97■□□□□ 0.47
SMARCD3-201ENST00000262188 ZNF561-AS1K7EIQ3 104 aa17.96■□□□□ 0.47
SMARCD3-201ENST00000262188 SLPIP03973 132 aa17.96■□□□□ 0.47
SMARCD3-201ENST00000262188 PKIGQ9Y2B9 76 aa17.96■□□□□ 0.47
SMARCD3-201ENST00000262188 Q8IZM0 81 aa17.95■□□□□ 0.46
SMARCD3-201ENST00000262188 C10orf25Q5T742 122 aa17.95■□□□□ 0.46
SMARCD3-201ENST00000262188 TRBV10-3A0A0K0K1G6 114 aa17.93■□□□□ 0.46
SMARCD3-201ENST00000262188 UNQ6190/PRO20217Q6UXQ8 127 aa17.93■□□□□ 0.46
SMARCD3-201ENST00000262188 ZNF625Q96I27 306 aaPredicted RBP17.93■□□□□ 0.46
SMARCD3-201ENST00000262188 ATP5EP56381 51 aaPredicted RBP17.92■□□□□ 0.46
SMARCD3-201ENST00000262188 NDUFA1O15239 70 aa17.91■□□□□ 0.46
SMARCD3-201ENST00000262188 DNAH11Q96DT5 4516 aa17.9■□□□□ 0.46
SMARCD3-201ENST00000262188 IGKV3D-7A0A0C4DH55 119 aa17.9■□□□□ 0.46
SMARCD3-201ENST00000262188 Q8N814 137 aa17.9■□□□□ 0.46
SMARCD3-201ENST00000262188 CAMK2N2Q96S95 79 aa17.9■□□□□ 0.46
SMARCD3-201ENST00000262188 Q6ZRU5 148 aa17.89■□□□□ 0.45
SMARCD3-201ENST00000262188 GHRHP01286 108 aa17.88■□□□□ 0.45
SMARCD3-201ENST00000262188 C9orf116Q5BN46 136 aaPredicted RBP17.88■□□□□ 0.45
SMARCD3-201ENST00000262188 LINC00308Q8TCZ7 52 aa17.88■□□□□ 0.45
SMARCD3-201ENST00000262188 HECTD4Q9Y4D8 3996 aa17.86■□□□□ 0.45
SMARCD3-201ENST00000262188 LINC00846Q9NV44 126 aa17.86■□□□□ 0.45
SMARCD3-201ENST00000262188 H7BZZ5 65 aa17.84■□□□□ 0.45
SMARCD3-201ENST00000262188 C6orf48Q9UBA6 75 aa17.84■□□□□ 0.45
SMARCD3-201ENST00000262188 SYCNQ0VAF6 134 aa17.84■□□□□ 0.45
SMARCD3-201ENST00000262188 C14orf177Q52M58 125 aa17.84■□□□□ 0.45
SMARCD3-201ENST00000262188 A0A087WVE0 104 aa17.83■□□□□ 0.44
SMARCD3-201ENST00000262188 KLKP1Q107X0 134 aa17.83■□□□□ 0.44
SMARCD3-201ENST00000262188 NDUFC1O43677 76 aa17.82■□□□□ 0.44
SMARCD3-201ENST00000262188 RPL28P46779 137 aaKnown RBP17.82■□□□□ 0.44
SMARCD3-201ENST00000262188 PKD1P98161 4303 aa17.82■□□□□ 0.44
SMARCD3-201ENST00000262188 A0A0U1RRA0 63 aa17.82■□□□□ 0.44
SMARCD3-201ENST00000262188 TRAV7A0A075B6U4 112 aa17.8■□□□□ 0.44
SMARCD3-201ENST00000262188 KRTAP10-2P60368 255 aa17.8■□□□□ 0.44
SMARCD3-201ENST00000262188 FP248Q71RG6 208 aaPredicted RBP17.8■□□□□ 0.44
SMARCD3-201ENST00000262188 C20orf197Q8N268 126 aa17.79■□□□□ 0.44
SMARCD3-201ENST00000262188 TRAV13-2A0A0B4J235 113 aa17.77■□□□□ 0.44
SMARCD3-201ENST00000262188 CNBPP62633 177 aaKnown RBP17.77■□□□□ 0.43
SMARCD3-201ENST00000262188 H0YGX0 51 aa17.76■□□□□ 0.43
SMARCD3-201ENST00000262188 FAM218AQ96MZ4 157 aa17.75■□□□□ 0.43
SMARCD3-201ENST00000262188 DNAH5Q8TE73 4624 aa17.75■□□□□ 0.43
SMARCD3-201ENST00000262188 LAMTOR3Q9UHA4 124 aa17.75■□□□□ 0.43
SMARCD3-201ENST00000262188 CCKP06307 115 aa17.72■□□□□ 0.43
SMARCD3-201ENST00000262188 C14orf132Q9NPU4 83 aa17.72■□□□□ 0.43
SMARCD3-201ENST00000262188 IGLV5-52A0A0A0MRZ9 124 aa17.71■□□□□ 0.43
SMARCD3-201ENST00000262188 BRK1Q8WUW1 75 aa17.71■□□□□ 0.43
SMARCD3-201ENST00000262188 LINC00158P58513 81 aa17.69■□□□□ 0.42
SMARCD3-201ENST00000262188 C9orf163Q8N9P6 203 aa17.68■□□□□ 0.42
SMARCD3-201ENST00000262188 Q6ZRP5 223 aa17.66■□□□□ 0.42
SMARCD3-201ENST00000262188 PKHD1P08F94 4074 aa17.66■□□□□ 0.42
SMARCD3-201ENST00000262188 A0A1B0GVY2 172 aa17.66■□□□□ 0.42
SMARCD3-201ENST00000262188 MIR7-3HGQ8N6C7 128 aa17.64■□□□□ 0.41
SMARCD3-201ENST00000262188 TRBV7-6A0A0J9YX20 115 aa17.64■□□□□ 0.41
SMARCD3-201ENST00000262188 TRAV23DV6A0A075B6W5 121 aa17.63■□□□□ 0.41
SMARCD3-201ENST00000262188 JMJD7-PLA2G4BH0Y9G9 81 aa17.63■□□□□ 0.41
SMARCD3-201ENST00000262188 XAGE1AQ9HD64 81 aa17.62■□□□□ 0.41
SMARCD3-201ENST00000262188 CHTF8P0CG12 524 aa17.61■□□□□ 0.41
SMARCD3-201ENST00000262188 SOSTDC1Q6X4U4 206 aa17.61■□□□□ 0.41
SMARCD3-201ENST00000262188 A0A096LNI7 61 aa17.6■□□□□ 0.41
SMARCD3-201ENST00000262188 IGKV2-24A0A0C4DH68 120 aa17.6■□□□□ 0.41
SMARCD3-201ENST00000262188 PANO1I0J062 215 aa17.58■□□□□ 0.4
SMARCD3-201ENST00000262188 COX17Q14061 63 aa17.58■□□□□ 0.4
SMARCD3-201ENST00000262188 RBM3P98179 157 aaKnown RBP17.57■□□□□ 0.4
SMARCD3-201ENST00000262188 SND1-IT1Q9HBX3 110 aa17.57■□□□□ 0.4
SMARCD3-201ENST00000262188 TLX1NBP0CAT3 122 aa17.57■□□□□ 0.4
SMARCD3-201ENST00000262188 UBL5Q9BZL1 73 aa17.56■□□□□ 0.4
SMARCD3-201ENST00000262188 PRR15Q8IV56 129 aa17.55■□□□□ 0.4
SMARCD3-201ENST00000262188 A0A0U1RQV1 116 aa17.55■□□□□ 0.4
SMARCD3-201ENST00000262188 C9orf129Q5T035 196 aaKnown RBP17.55■□□□□ 0.4
SMARCD3-201ENST00000262188 PMAIP1Q13794 54 aa17.54■□□□□ 0.4
SMARCD3-201ENST00000262188 KRTAP10-1P60331 282 aa17.53■□□□□ 0.4
SMARCD3-201ENST00000262188 ORMDL1Q9P0S3 153 aa17.53■□□□□ 0.4
SMARCD3-201ENST00000262188 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.53■□□□□ 0.4
SMARCD3-201ENST00000262188 Q8NDZ9 215 aa17.52■□□□□ 0.4
SMARCD3-201ENST00000262188 FAM168BA1KXE4 195 aa17.51■□□□□ 0.39
SMARCD3-201ENST00000262188 F8WEM9 126 aa17.51■□□□□ 0.39
SMARCD3-201ENST00000262188 FAM19A1Q7Z5A9 133 aa17.51■□□□□ 0.39
SMARCD3-201ENST00000262188 DYNC1H1Q14204 4646 aaKnown RBP17.5■□□□□ 0.39
SMARCD3-201ENST00000262188 A0A087WYN8 130 aa17.5■□□□□ 0.39
SMARCD3-201ENST00000262188 C16orf90A8MZG2 172 aa17.49■□□□□ 0.39
SMARCD3-201ENST00000262188 LINC00167Q96N53 147 aa17.49■□□□□ 0.39
SMARCD3-201ENST00000262188 LRP1BQ9NZR2 4599 aa17.48■□□□□ 0.39
SMARCD3-201ENST00000262188 FAM30AQ9NZY2 134 aa17.48■□□□□ 0.39
SMARCD3-201ENST00000262188 NCR3O14931 201 aa17.47■□□□□ 0.39
SMARCD3-201ENST00000262188 ERC2-IT1O76042 136 aa17.47■□□□□ 0.39
SMARCD3-201ENST00000262188 LINC00474Q9P2X8 69 aa17.46■□□□□ 0.39
SMARCD3-201ENST00000262188 SMIM11BQ8TCY0 68 aa17.45■□□□□ 0.38
SMARCD3-201ENST00000262188 PRR3P79522 188 aaKnown RBP17.44■□□□□ 0.38
SMARCD3-201ENST00000262188 HAMPP81172 84 aa17.44■□□□□ 0.38
SMARCD3-201ENST00000262188 SERTAD4-AS1Q5TG53 156 aa17.44■□□□□ 0.38
SMARCD3-201ENST00000262188 DNAH8Q96JB1 4490 aa17.44■□□□□ 0.38
SMARCD3-201ENST00000262188 CD164Q04900 197 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms