RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 FLNBO75369 2602 aaKnown RBP12.67□□□□□ -0.38
SCARB1-201ENST00000261693 KLKP1Q107X0 134 aa12.67□□□□□ -0.38
SCARB1-201ENST00000261693 SERTAD4-AS1Q5TG53 156 aa12.67□□□□□ -0.38
SCARB1-201ENST00000261693 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
SCARB1-201ENST00000261693 WIPF1O43516 503 aa12.66□□□□□ -0.38
SCARB1-201ENST00000261693 SYCNQ0VAF6 134 aa12.66□□□□□ -0.38
SCARB1-201ENST00000261693 C5orf47Q569G3 176 aa12.66□□□□□ -0.38
SCARB1-201ENST00000261693 Q5XG85 94 aa12.65□□□□□ -0.38
SCARB1-201ENST00000261693 NKAPP1Q8N9T2 125 aa12.65□□□□□ -0.38
SCARB1-201ENST00000261693 F8WEM9 126 aa12.64□□□□□ -0.39
SCARB1-201ENST00000261693 STAB1Q9NY15 2570 aa12.64□□□□□ -0.39
SCARB1-201ENST00000261693 C7orf33Q8WU49 177 aa12.63□□□□□ -0.39
SCARB1-201ENST00000261693 BPY2O14599 106 aa12.63□□□□□ -0.39
SCARB1-201ENST00000261693 NREPQ16612 68 aa12.62□□□□□ -0.39
SCARB1-201ENST00000261693 DEFB131BA0A096LNP1 70 aa12.61□□□□□ -0.39
SCARB1-201ENST00000261693 RPL37AP8A6NKH3 93 aa12.61□□□□□ -0.39
SCARB1-201ENST00000261693 LINC01556Q5JQF7 62 aa12.61□□□□□ -0.39
SCARB1-201ENST00000261693 HRCT1Q6UXD1 115 aa12.61□□□□□ -0.39
SCARB1-201ENST00000261693 NOTCH1P46531 2555 aa12.6□□□□□ -0.39
SCARB1-201ENST00000261693 Q8N377 158 aa12.6□□□□□ -0.39
SCARB1-201ENST00000261693 KCNQ1DNQ9H478 68 aa12.6□□□□□ -0.39
SCARB1-201ENST00000261693 IGKV4-1P06312 121 aa12.59□□□□□ -0.39
SCARB1-201ENST00000261693 MAST4O15021 2626 aa12.59□□□□□ -0.39
SCARB1-201ENST00000261693 BAHCC1Q9P281 2608 aa12.59□□□□□ -0.39
SCARB1-201ENST00000261693 FAM168BA1KXE4 195 aa12.58□□□□□ -0.39
SCARB1-201ENST00000261693 F8P00451 2351 aa12.58□□□□□ -0.4
SCARB1-201ENST00000261693 SERP1Q9Y6X1 66 aa12.57□□□□□ -0.4
SCARB1-201ENST00000261693 C11orf45Q8TAV5 145 aa12.56□□□□□ -0.4
SCARB1-201ENST00000261693 FBN1P35555 2871 aaKnown RBP12.55□□□□□ -0.4
SCARB1-201ENST00000261693 CASC10Q5T4H9 136 aa12.54□□□□□ -0.4
SCARB1-201ENST00000261693 TMEM254Q8TBM7 123 aa12.54□□□□□ -0.4
SCARB1-201ENST00000261693 Q9BRP9 147 aa12.53□□□□□ -0.4
SCARB1-201ENST00000261693 CMYA5Q8N3K9 4069 aa12.53□□□□□ -0.4
SCARB1-201ENST00000261693 ST20-AS1Q8NBB2 130 aa12.52□□□□□ -0.4
SCARB1-201ENST00000261693 EPM2AB3EWF7 344 aa12.51□□□□□ -0.41
SCARB1-201ENST00000261693 Q6ZRX8 168 aa12.51□□□□□ -0.41
SCARB1-201ENST00000261693 IGLV5-48A0A075B6I7 105 aa12.51□□□□□ -0.41
SCARB1-201ENST00000261693 F8WDY8 70 aa12.51□□□□□ -0.41
SCARB1-201ENST00000261693 DNAH10OSP0CZ25 163 aa12.49□□□□□ -0.41
SCARB1-201ENST00000261693 ETDCA0A1B0GVM5 59 aa12.48□□□□□ -0.41
SCARB1-201ENST00000261693 DHRS4-AS1Q9P1J3 65 aa12.48□□□□□ -0.41
SCARB1-201ENST00000261693 A0A1W2PNM2 257 aa12.48□□□□□ -0.41
SCARB1-201ENST00000261693 OCR1Q9BZK8 76 aa12.48□□□□□ -0.41
SCARB1-201ENST00000261693 IGLV1-50A0A075B6I6 118 aa12.47□□□□□ -0.41
SCARB1-201ENST00000261693 NDUFC1O43677 76 aa12.47□□□□□ -0.41
SCARB1-201ENST00000261693 FUSP35637 526 aaKnown RBP eCLIP12.47□□□□□ -0.413e-6■■□□□ 13.4
SCARB1-201ENST00000261693 KRTAP4-16G5E9R7 235 aaPredicted RBP12.47□□□□□ -0.41
SCARB1-201ENST00000261693 KRTAP7-1Q8IUC3 87 aa12.47□□□□□ -0.41
SCARB1-201ENST00000261693 C1orf137Q5JT78 98 aa12.46□□□□□ -0.42
SCARB1-201ENST00000261693 TLX1NBP0CAT3 122 aa12.45□□□□□ -0.42
SCARB1-201ENST00000261693 ERC2-IT1O76042 136 aa12.45□□□□□ -0.42
SCARB1-201ENST00000261693 MRAPQ8TCY5 172 aa12.45□□□□□ -0.42
SCARB1-201ENST00000261693 LINC00588Q9Y4M8 146 aa12.45□□□□□ -0.42
SCARB1-201ENST00000261693 PRYO14603 147 aa12.43□□□□□ -0.42
SCARB1-201ENST00000261693 PLA2G2DQ9UNK4 145 aa12.42□□□□□ -0.42
SCARB1-201ENST00000261693 SMIM29Q86T20 159 aa12.42□□□□□ -0.42
SCARB1-201ENST00000261693 HIGD2AQ9BW72 106 aa12.42□□□□□ -0.42
SCARB1-201ENST00000261693 FAM30AQ9NZY2 134 aa12.42□□□□□ -0.42
SCARB1-201ENST00000261693 NBEAL1Q6ZS30 2694 aa12.42□□□□□ -0.42
SCARB1-201ENST00000261693 FP248Q71RG6 208 aaPredicted RBP12.41□□□□□ -0.42
SCARB1-201ENST00000261693 COL6A5A8TX70 2615 aa12.41□□□□□ -0.42
SCARB1-201ENST00000261693 SPRR1AP35321 89 aa12.41□□□□□ -0.42
SCARB1-201ENST00000261693 TNP2Q05952 138 aa12.41□□□□□ -0.42
SCARB1-201ENST00000261693 A0A0U1RQV1 116 aa12.41□□□□□ -0.42
SCARB1-201ENST00000261693 UBE2BP63146 152 aa12.41□□□□□ -0.42
SCARB1-201ENST00000261693 LINC00474Q9P2X8 69 aa12.41□□□□□ -0.42
SCARB1-201ENST00000261693 MRPL55Q7Z7F7 128 aaKnown RBP12.4□□□□□ -0.42
SCARB1-201ENST00000261693 PRB2P02812 416 aaPredicted RBP12.39□□□□□ -0.43
SCARB1-201ENST00000261693 Q8NBF4 154 aa12.39□□□□□ -0.43
SCARB1-201ENST00000261693 DNAH1Q9P2D7 4330 aa12.38□□□□□ -0.43
SCARB1-201ENST00000261693 IGLV5-37A0A075B6J1 123 aa12.38□□□□□ -0.43
SCARB1-201ENST00000261693 SMIM26A0A096LP01 95 aa12.38□□□□□ -0.43
SCARB1-201ENST00000261693 A0A0G2JQZ4 141 aa12.38□□□□□ -0.43
SCARB1-201ENST00000261693 A0A1W2PNN7 141 aa12.38□□□□□ -0.43
SCARB1-201ENST00000261693 DNAH3Q8TD57 4116 aa12.36□□□□□ -0.43
SCARB1-201ENST00000261693 LYSTQ99698 3801 aa12.36□□□□□ -0.43
SCARB1-201ENST00000261693 KRTAP24-1Q3LI83 254 aa12.35□□□□□ -0.43
SCARB1-201ENST00000261693 ATP5EP56381 51 aaPredicted RBP12.35□□□□□ -0.43
SCARB1-201ENST00000261693 DSCR10P59022 87 aa12.33□□□□□ -0.44
SCARB1-201ENST00000261693 FAM229BQ4G0N7 80 aa12.33□□□□□ -0.44
SCARB1-201ENST00000261693 K7EQZ3 153 aa12.32□□□□□ -0.44
SCARB1-201ENST00000261693 SPRR4Q96PI1 79 aa12.32□□□□□ -0.44
SCARB1-201ENST00000261693 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
SCARB1-201ENST00000261693 LINC00336Q6ZUF6 198 aa12.32□□□□□ -0.44
SCARB1-201ENST00000261693 DNAH10Q8IVF4 4471 aa12.32□□□□□ -0.44
SCARB1-201ENST00000261693 A0A1B0GW54 56 aa12.31□□□□□ -0.44
SCARB1-201ENST00000261693 SRRM2Q9UQ35 2752 aaKnown RBP12.31□□□□□ -0.44
SCARB1-201ENST00000261693 LINC00476Q8WZB0 136 aa12.29□□□□□ -0.44
SCARB1-201ENST00000261693 DEFB116Q30KQ4 102 aa12.28□□□□□ -0.44
SCARB1-201ENST00000261693 CSMD3Q7Z407 3707 aa12.28□□□□□ -0.44
SCARB1-201ENST00000261693 IGKV2-24A0A0C4DH68 120 aa12.27□□□□□ -0.44
SCARB1-201ENST00000261693 PRLHP81277 87 aa12.27□□□□□ -0.45
SCARB1-201ENST00000261693 MPLKIPQ8TAP9 179 aa12.26□□□□□ -0.45
SCARB1-201ENST00000261693 HUWE1Q7Z6Z7 4374 aaKnown RBP12.24□□□□□ -0.45
SCARB1-201ENST00000261693 A0A096LNI7 61 aa12.23□□□□□ -0.45
SCARB1-201ENST00000261693 IGFL1Q6UW32 110 aa12.23□□□□□ -0.45
SCARB1-201ENST00000261693 PSCAO43653 123 aa12.21□□□□□ -0.45
SCARB1-201ENST00000261693 STAB2Q8WWQ8 2551 aa12.21□□□□□ -0.46
SCARB1-201ENST00000261693 LCE6AA0A183 80 aa12.2□□□□□ -0.46
SCARB1-201ENST00000261693 HCG22E2RYF7 251 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms