RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 A0A096LNI7 61 aa11.14□□□□□ -0.63
SRSF1-201ENST00000258962 C9orf163Q8N9P6 203 aa11.14□□□□□ -0.63
SRSF1-201ENST00000258962 PKIGQ9Y2B9 76 aa11.14□□□□□ -0.63
SRSF1-201ENST00000258962 IGLV5-37A0A075B6J1 123 aa11.13□□□□□ -0.63
SRSF1-201ENST00000258962 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
SRSF1-201ENST00000258962 BAALC-AS2P0C853 105 aa11.12□□□□□ -0.63
SRSF1-201ENST00000258962 VPS25Q9BRG1 176 aa11.12□□□□□ -0.63
SRSF1-201ENST00000258962 DYNC1H1Q14204 4646 aaKnown RBP11.11□□□□□ -0.63
SRSF1-201ENST00000258962 C6orf99Q4VX62 202 aa11.11□□□□□ -0.63
SRSF1-201ENST00000258962 NKAPP1Q8N9T2 125 aa11.11□□□□□ -0.63
SRSF1-201ENST00000258962 TRBV7-6A0A0J9YX20 115 aa11.1□□□□□ -0.63
SRSF1-201ENST00000258962 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
SRSF1-201ENST00000258962 KIAA1109Q2LD37 5005 aa11.1□□□□□ -0.63
SRSF1-201ENST00000258962 TRAV23DV6A0A075B6W5 121 aa11.09□□□□□ -0.63
SRSF1-201ENST00000258962 A0A087WYN8 130 aa11.09□□□□□ -0.63
SRSF1-201ENST00000258962 KRTAP10-1P60331 282 aa11.09□□□□□ -0.63
SRSF1-201ENST00000258962 IGKV2-24A0A0C4DH68 120 aa11.09□□□□□ -0.63
SRSF1-201ENST00000258962 FAM19A5Q7Z5A7 132 aaPredicted RBP11.09□□□□□ -0.63
SRSF1-201ENST00000258962 DIRC1Q969H9 104 aa11.09□□□□□ -0.63
SRSF1-201ENST00000258962 H3BQ85 93 aa11.08□□□□□ -0.64
SRSF1-201ENST00000258962 SDIM1Q6ZPB5 146 aa11.08□□□□□ -0.64
SRSF1-201ENST00000258962 GHRHP01286 108 aa11.07□□□□□ -0.64
SRSF1-201ENST00000258962 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
SRSF1-201ENST00000258962 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
SRSF1-201ENST00000258962 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
SRSF1-201ENST00000258962 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
SRSF1-201ENST00000258962 ZNF73O43830 326 aaPredicted RBP11.05□□□□□ -0.64
SRSF1-201ENST00000258962 LINC00167Q96N53 147 aa11.05□□□□□ -0.64
SRSF1-201ENST00000258962 LINC00575Q6W349 94 aa11.04□□□□□ -0.64
SRSF1-201ENST00000258962 INAFM2P0DMQ5 153 aa11.04□□□□□ -0.64
SRSF1-201ENST00000258962 COX7BP24311 80 aa11.04□□□□□ -0.64
SRSF1-201ENST00000258962 LRP1BQ9NZR2 4599 aa11.03□□□□□ -0.64
SRSF1-201ENST00000258962 hADV29S1A0JD25 119 aa11.03□□□□□ -0.64
SRSF1-201ENST00000258962 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
SRSF1-201ENST00000258962 KCNQ1DNQ9H478 68 aa11.03□□□□□ -0.64
SRSF1-201ENST00000258962 IGLV1-50A0A075B6I6 118 aa11.02□□□□□ -0.65
SRSF1-201ENST00000258962 TEX49A0A1B0GTD5 131 aa11.02□□□□□ -0.65
SRSF1-201ENST00000258962 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.65
SRSF1-201ENST00000258962 PANO1I0J062 215 aa11.02□□□□□ -0.65
SRSF1-201ENST00000258962 TMEM256-PLSCR3K7ERE1 68 aa11.02□□□□□ -0.65
SRSF1-201ENST00000258962 DNAH5Q8TE73 4624 aa11□□□□□ -0.65
SRSF1-201ENST00000258962 ELOF1P60002 83 aaKnown RBP10.99□□□□□ -0.65
SRSF1-201ENST00000258962 XGP55808 180 aa10.99□□□□□ -0.65
SRSF1-201ENST00000258962 PRYO14603 147 aa10.98□□□□□ -0.65
SRSF1-201ENST00000258962 LINC00474Q9P2X8 69 aa10.98□□□□□ -0.65
SRSF1-201ENST00000258962 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
SRSF1-201ENST00000258962 HERC2O95714 4834 aa10.97□□□□□ -0.65
SRSF1-201ENST00000258962 ACYP1P07311 99 aa10.97□□□□□ -0.65
SRSF1-201ENST00000258962 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
SRSF1-201ENST00000258962 FAM30AQ9NZY2 134 aa10.97□□□□□ -0.65
SRSF1-201ENST00000258962 RYR1P21817 5038 aa10.97□□□□□ -0.65
SRSF1-201ENST00000258962 JMJD7-PLA2G4BH0Y9G9 81 aa10.96□□□□□ -0.65
SRSF1-201ENST00000258962 SPRR1AP35321 89 aa10.96□□□□□ -0.65
SRSF1-201ENST00000258962 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.96□□□□□ -0.65
SRSF1-201ENST00000258962 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
SRSF1-201ENST00000258962 FAM240AA0A1B0GVK7 77 aa10.95□□□□□ -0.66
SRSF1-201ENST00000258962 KRTAP4-16G5E9R7 235 aaPredicted RBP10.95□□□□□ -0.66
SRSF1-201ENST00000258962 Q8N1X5 172 aa10.95□□□□□ -0.66
SRSF1-201ENST00000258962 HAMPP81172 84 aa10.94□□□□□ -0.66
SRSF1-201ENST00000258962 Q6ZSA8 131 aa10.94□□□□□ -0.66
SRSF1-201ENST00000258962 PHF5AQ7RTV0 110 aaKnown RBP10.94□□□□□ -0.66
SRSF1-201ENST00000258962 EPM2AB3EWF7 344 aa10.93□□□□□ -0.66
SRSF1-201ENST00000258962 OBSCN-AS1Q96MR7 158 aa10.92□□□□□ -0.66
SRSF1-201ENST00000258962 SIGMAR1Q99720 223 aa10.92□□□□□ -0.66
SRSF1-201ENST00000258962 B5MCH6 92 aa10.91□□□□□ -0.66
SRSF1-201ENST00000258962 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
SRSF1-201ENST00000258962 SMR3BP02814 79 aaPredicted RBP10.9□□□□□ -0.66
SRSF1-201ENST00000258962 REG3GQ6UW15 175 aa10.9□□□□□ -0.66
SRSF1-201ENST00000258962 DHRS4-AS1Q9P1J3 65 aa10.9□□□□□ -0.66
SRSF1-201ENST00000258962 HSPG2P98160 4391 aa10.9□□□□□ -0.66
SRSF1-201ENST00000258962 APOBP04114 4563 aaKnown RBP10.9□□□□□ -0.66
SRSF1-201ENST00000258962 ETDCA0A1B0GVM5 59 aa10.89□□□□□ -0.67
SRSF1-201ENST00000258962 Q6ZQY7 126 aa10.89□□□□□ -0.67
SRSF1-201ENST00000258962 Q6ZRX8 168 aa10.89□□□□□ -0.67
SRSF1-201ENST00000258962 DPH3Q96FX2 82 aa10.88□□□□□ -0.67
SRSF1-201ENST00000258962 KRTAP17-1Q9BYP8 105 aa10.88□□□□□ -0.67
SRSF1-201ENST00000258962 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
SRSF1-201ENST00000258962 C21orf62-AS1Q17RA5 79 aa10.87□□□□□ -0.67
SRSF1-201ENST00000258962 SCXQ7RTU7 201 aa10.87□□□□□ -0.67
SRSF1-201ENST00000258962 Q9BRP9 147 aa10.87□□□□□ -0.67
SRSF1-201ENST00000258962 KRTAP4-5Q9BYR2 181 aa10.86□□□□□ -0.67
SRSF1-201ENST00000258962 CDIP1Q9H305 208 aa10.86□□□□□ -0.67
SRSF1-201ENST00000258962 UBE2BP63146 152 aa10.85□□□□□ -0.67
SRSF1-201ENST00000258962 LAMTOR3Q9UHA4 124 aa10.85□□□□□ -0.67
SRSF1-201ENST00000258962 CIRBP-AS1Q8TBR5 109 aa10.84□□□□□ -0.67
SRSF1-201ENST00000258962 PLAC8Q9NZF1 115 aa10.84□□□□□ -0.67
SRSF1-201ENST00000258962 PDE6GP18545 87 aa10.84□□□□□ -0.67
SRSF1-201ENST00000258962 Q5VSD8 79 aa10.84□□□□□ -0.67
SRSF1-201ENST00000258962 DNAH8Q96JB1 4490 aa10.83□□□□□ -0.68
SRSF1-201ENST00000258962 RBM3P98179 157 aaKnown RBP10.83□□□□□ -0.68
SRSF1-201ENST00000258962 GAGE2AQ6NT46 116 aa10.83□□□□□ -0.68
SRSF1-201ENST00000258962 C14orf132Q9NPU4 83 aa10.83□□□□□ -0.68
SRSF1-201ENST00000258962 FAM19A1Q7Z5A9 133 aa10.8□□□□□ -0.68
SRSF1-201ENST00000258962 CCKP06307 115 aa10.79□□□□□ -0.68
SRSF1-201ENST00000258962 PRLHP81277 87 aa10.79□□□□□ -0.68
SRSF1-201ENST00000258962 SMCR5Q8TEV8 140 aa10.79□□□□□ -0.68
SRSF1-201ENST00000258962 DSCR8Q96T75 97 aa10.79□□□□□ -0.68
SRSF1-201ENST00000258962 ERC2-IT1O76042 136 aa10.79□□□□□ -0.68
SRSF1-201ENST00000258962 PLA2G1BP04054 148 aaKnown RBP10.78□□□□□ -0.68
SRSF1-201ENST00000258962 SCGB1A1P11684 91 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms