RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 LINC00588Q9Y4M8 146 aa10.42□□□□□ -0.74
LRFN1-201ENST00000248668 Q6ZRP5 223 aa10.4□□□□□ -0.74
LRFN1-201ENST00000248668 COL7A1Q02388 2944 aa10.4□□□□□ -0.74
LRFN1-201ENST00000248668 F8WEM9 126 aa10.4□□□□□ -0.75
LRFN1-201ENST00000248668 TRAV10A0A0B4J240 114 aa10.39□□□□□ -0.75
LRFN1-201ENST00000248668 Q6ZQY7 126 aa10.39□□□□□ -0.75
LRFN1-201ENST00000248668 SERP1Q9Y6X1 66 aa10.39□□□□□ -0.75
LRFN1-201ENST00000248668 HAMPP81172 84 aa10.38□□□□□ -0.75
LRFN1-201ENST00000248668 OBSCN-AS1Q96MR7 158 aa10.38□□□□□ -0.75
LRFN1-201ENST00000248668 TMEM256-PLSCR3K7ERE1 68 aa10.38□□□□□ -0.75
LRFN1-201ENST00000248668 LINC00167Q96N53 147 aa10.38□□□□□ -0.75
LRFN1-201ENST00000248668 NDUFC2-KCTD14E9PQ53 114 aa10.37□□□□□ -0.75
LRFN1-201ENST00000248668 VPREB1P12018 145 aa10.37□□□□□ -0.75
LRFN1-201ENST00000248668 SYCNQ0VAF6 134 aa10.37□□□□□ -0.75
LRFN1-201ENST00000248668 DIRC1Q969H9 104 aa10.37□□□□□ -0.75
LRFN1-201ENST00000248668 LAMTOR3Q9UHA4 124 aa10.37□□□□□ -0.75
LRFN1-201ENST00000248668 ZNF73O43830 326 aaPredicted RBP10.36□□□□□ -0.75
LRFN1-201ENST00000248668 FP248Q71RG6 208 aaPredicted RBP10.36□□□□□ -0.75
LRFN1-201ENST00000248668 MUC7Q8TAX7 377 aa10.36□□□□□ -0.75
LRFN1-201ENST00000248668 TM2D3Q9BRN9 247 aa10.36□□□□□ -0.75
LRFN1-201ENST00000248668 DNAH10OSP0CZ25 163 aa10.35□□□□□ -0.75
LRFN1-201ENST00000248668 SMIM26A0A096LP01 95 aa10.34□□□□□ -0.75
LRFN1-201ENST00000248668 LRCOL1A6NCL2 159 aa10.34□□□□□ -0.75
LRFN1-201ENST00000248668 SCXQ7RTU7 201 aa10.32□□□□□ -0.76
LRFN1-201ENST00000248668 H7BZZ5 65 aa10.32□□□□□ -0.76
LRFN1-201ENST00000248668 COX7BP24311 80 aa10.32□□□□□ -0.76
LRFN1-201ENST00000248668 CSMD3Q7Z407 3707 aa10.32□□□□□ -0.76
LRFN1-201ENST00000248668 TRBV7-6A0A0J9YX20 115 aa10.32□□□□□ -0.76
LRFN1-201ENST00000248668 CCKP06307 115 aa10.32□□□□□ -0.76
LRFN1-201ENST00000248668 SERTAD4-AS1Q5TG53 156 aa10.32□□□□□ -0.76
LRFN1-201ENST00000248668 DNAH10Q8IVF4 4471 aa10.31□□□□□ -0.76
LRFN1-201ENST00000248668 JMJD7-PLA2G4BH0Y9G9 81 aa10.31□□□□□ -0.76
LRFN1-201ENST00000248668 M0R378 163 aa10.31□□□□□ -0.76
LRFN1-201ENST00000248668 TGP01266 2768 aa10.31□□□□□ -0.76
LRFN1-201ENST00000248668 FAM168BA1KXE4 195 aa10.3□□□□□ -0.76
LRFN1-201ENST00000248668 M0R2N4 97 aa10.3□□□□□ -0.76
LRFN1-201ENST00000248668 UBL5Q9BZL1 73 aa10.3□□□□□ -0.76
LRFN1-201ENST00000248668 NKAPP1Q8N9T2 125 aa10.29□□□□□ -0.76
LRFN1-201ENST00000248668 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
LRFN1-201ENST00000248668 MDFIQ99750 246 aa10.28□□□□□ -0.76
LRFN1-201ENST00000248668 ELOF1P60002 83 aaKnown RBP10.27□□□□□ -0.77
LRFN1-201ENST00000248668 DNAH1Q9P2D7 4330 aa10.25□□□□□ -0.77
LRFN1-201ENST00000248668 C7orf33Q8WU49 177 aa10.25□□□□□ -0.77
LRFN1-201ENST00000248668 DNAH9Q9NYC9 4486 aa10.24□□□□□ -0.77
LRFN1-201ENST00000248668 DEFB105AQ8NG35 78 aa10.24□□□□□ -0.77
LRFN1-201ENST00000248668 FAM229BQ4G0N7 80 aa10.23□□□□□ -0.77
LRFN1-201ENST00000248668 KRTAP1-5Q9BYS1 174 aa10.23□□□□□ -0.77
LRFN1-201ENST00000248668 Q6ZQT0 140 aa10.23□□□□□ -0.77
LRFN1-201ENST00000248668 LINC00528Q8N1L1 170 aa10.21□□□□□ -0.77
LRFN1-201ENST00000248668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.2□□□□□ -0.78
LRFN1-201ENST00000248668 TRAV7A0A075B6U4 112 aa10.2□□□□□ -0.78
LRFN1-201ENST00000248668 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
LRFN1-201ENST00000248668 UBE2DNLQ8IWF7 75 aa10.2□□□□□ -0.78
LRFN1-201ENST00000248668 DNAH7Q8WXX0 4024 aa10.19□□□□□ -0.78
LRFN1-201ENST00000248668 ATP5EP2Q5VTU8 51 aa10.19□□□□□ -0.78
LRFN1-201ENST00000248668 IGKV2-24A0A0C4DH68 120 aa10.17□□□□□ -0.78
LRFN1-201ENST00000248668 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
LRFN1-201ENST00000248668 PSCAO43653 123 aa10.17□□□□□ -0.78
LRFN1-201ENST00000248668 PMAIP1Q13794 54 aa10.17□□□□□ -0.78
LRFN1-201ENST00000248668 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
LRFN1-201ENST00000248668 LINC01547P58512 204 aaPredicted RBP10.16□□□□□ -0.78
LRFN1-201ENST00000248668 KLKP1Q107X0 134 aa10.15□□□□□ -0.79
LRFN1-201ENST00000248668 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.79
LRFN1-201ENST00000248668 LOC110117498A0A087WWA1 95 aa10.14□□□□□ -0.79
LRFN1-201ENST00000248668 PSPHP1O15172 72 aa10.14□□□□□ -0.79
LRFN1-201ENST00000248668 TLX1NBP0CAT3 122 aa10.13□□□□□ -0.79
LRFN1-201ENST00000248668 PLECQ15149 4684 aaKnown RBP10.13□□□□□ -0.79
LRFN1-201ENST00000248668 Q6ZVQ6 151 aa10.12□□□□□ -0.79
LRFN1-201ENST00000248668 Q8N9L7 120 aa10.12□□□□□ -0.79
LRFN1-201ENST00000248668 ETDCA0A1B0GVM5 59 aa10.12□□□□□ -0.79
LRFN1-201ENST00000248668 ST20-AS1Q8NBB2 130 aa10.11□□□□□ -0.79
LRFN1-201ENST00000248668 PRR4Q16378 134 aa10.11□□□□□ -0.79
LRFN1-201ENST00000248668 IGLV1-50A0A075B6I6 118 aa10.11□□□□□ -0.79
LRFN1-201ENST00000248668 Q9BRP9 147 aa10.11□□□□□ -0.79
LRFN1-201ENST00000248668 MRPL55Q7Z7F7 128 aaKnown RBP10.1□□□□□ -0.79
LRFN1-201ENST00000248668 TRBV7-4A0A0J9YYF1 115 aa10.1□□□□□ -0.79
LRFN1-201ENST00000248668 APLNQ9ULZ1 77 aa10.09□□□□□ -0.79
LRFN1-201ENST00000248668 A0A096LNI7 61 aa10.09□□□□□ -0.79
LRFN1-201ENST00000248668 Q6ZRX8 168 aa10.08□□□□□ -0.8
LRFN1-201ENST00000248668 Q8N377 158 aa10.08□□□□□ -0.8
LRFN1-201ENST00000248668 UBE2BP63146 152 aa10.08□□□□□ -0.8
LRFN1-201ENST00000248668 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
LRFN1-201ENST00000248668 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
LRFN1-201ENST00000248668 ERC2-IT1O76042 136 aa10.07□□□□□ -0.8
LRFN1-201ENST00000248668 CHTF8P0CG12 524 aa10.07□□□□□ -0.8
LRFN1-201ENST00000248668 FUSP35637 526 aaKnown RBP eCLIP10.07□□□□□ -0.8
LRFN1-201ENST00000248668 H3BQ85 93 aa10.06□□□□□ -0.8
LRFN1-201ENST00000248668 NREPQ16612 68 aa10.06□□□□□ -0.8
LRFN1-201ENST00000248668 TMEM254Q8TBM7 123 aa10.06□□□□□ -0.8
LRFN1-201ENST00000248668 PRKDCP78527 4128 aaKnown RBP10.06□□□□□ -0.8
LRFN1-201ENST00000248668 PDE6GP18545 87 aa10.05□□□□□ -0.8
LRFN1-201ENST00000248668 B9D2Q9BPU9 175 aa10.05□□□□□ -0.8
LRFN1-201ENST00000248668 PLA2G2DQ9UNK4 145 aa10.05□□□□□ -0.8
LRFN1-201ENST00000248668 A0A1W2PNN7 141 aa10.05□□□□□ -0.8
LRFN1-201ENST00000248668 KRTAP4-16G5E9R7 235 aaPredicted RBP10.04□□□□□ -0.8
LRFN1-201ENST00000248668 PRYO14603 147 aa10.04□□□□□ -0.8
LRFN1-201ENST00000248668 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
LRFN1-201ENST00000248668 PRLHP81277 87 aa10.02□□□□□ -0.81
LRFN1-201ENST00000248668 DHRS4-AS1Q9P1J3 65 aa10.02□□□□□ -0.81
LRFN1-201ENST00000248668 HIGD2AQ9BW72 106 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms