RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 EGFEM1PQ0D2K5 195 aa13.21□□□□□ -0.3
CACTIN-202ENST00000248420 Q6ZTC4 211 aa13.2□□□□□ -0.3
CACTIN-202ENST00000248420 H3BQ85 93 aa13.19□□□□□ -0.3
CACTIN-202ENST00000248420 LINC00474Q9P2X8 69 aa13.19□□□□□ -0.3
CACTIN-202ENST00000248420 IGKV2D-24A0A075B6R9 120 aa13.19□□□□□ -0.3
CACTIN-202ENST00000248420 IGKV4-1P06312 121 aa13.17□□□□□ -0.3
CACTIN-202ENST00000248420 ESRGQ1W209 222 aa13.17□□□□□ -0.3
CACTIN-202ENST00000248420 SERTAD4-AS1Q5TG53 156 aa13.17□□□□□ -0.3
CACTIN-202ENST00000248420 TMEM254Q8TBM7 123 aa13.17□□□□□ -0.3
CACTIN-202ENST00000248420 FLNBO75369 2602 aaKnown RBP13.17□□□□□ -0.3
CACTIN-202ENST00000248420 FP248Q71RG6 208 aaPredicted RBP13.16□□□□□ -0.3
CACTIN-202ENST00000248420 RPL37AP8A6NKH3 93 aa13.16□□□□□ -0.3
CACTIN-202ENST00000248420 EPM2AB3EWF7 344 aa13.16□□□□□ -0.3
CACTIN-202ENST00000248420 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
CACTIN-202ENST00000248420 LINC00336Q6ZUF6 198 aa13.13□□□□□ -0.31
CACTIN-202ENST00000248420 Q8N377 158 aa13.13□□□□□ -0.31
CACTIN-202ENST00000248420 FBN1P35555 2871 aaKnown RBP13.12□□□□□ -0.31
CACTIN-202ENST00000248420 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
CACTIN-202ENST00000248420 MAST4O15021 2626 aa13.12□□□□□ -0.31
CACTIN-202ENST00000248420 NKAPP1Q8N9T2 125 aa13.12□□□□□ -0.31
CACTIN-202ENST00000248420 FAM168BA1KXE4 195 aa13.11□□□□□ -0.31
CACTIN-202ENST00000248420 C7orf33Q8WU49 177 aa13.11□□□□□ -0.31
CACTIN-202ENST00000248420 NOTCH1P46531 2555 aa13.1□□□□□ -0.31
CACTIN-202ENST00000248420 SYCNQ0VAF6 134 aa13.1□□□□□ -0.31
CACTIN-202ENST00000248420 HIGD2AQ9BW72 106 aa13.09□□□□□ -0.31
CACTIN-202ENST00000248420 FAM229BQ4G0N7 80 aa13.08□□□□□ -0.32
CACTIN-202ENST00000248420 ST20-AS1Q8NBB2 130 aa13.08□□□□□ -0.32
CACTIN-202ENST00000248420 WIPF1O43516 503 aa13.07□□□□□ -0.32
CACTIN-202ENST00000248420 OCR1Q9BZK8 76 aa13.07□□□□□ -0.32
CACTIN-202ENST00000248420 STAB1Q9NY15 2570 aa13.07□□□□□ -0.32
CACTIN-202ENST00000248420 FAM30AQ9NZY2 134 aa13.06□□□□□ -0.32
CACTIN-202ENST00000248420 SMIM26A0A096LP01 95 aa13.05□□□□□ -0.32
CACTIN-202ENST00000248420 KCNQ1DNQ9H478 68 aa13.04□□□□□ -0.32
CACTIN-202ENST00000248420 NDUFC1O43677 76 aa13.04□□□□□ -0.32
CACTIN-202ENST00000248420 MPLKIPQ8TAP9 179 aa13.04□□□□□ -0.32
CACTIN-202ENST00000248420 Q9BRP9 147 aa13.04□□□□□ -0.32
CACTIN-202ENST00000248420 SMIM29Q86T20 159 aa13.03□□□□□ -0.32
CACTIN-202ENST00000248420 A0A1W2PNM2 257 aa13.03□□□□□ -0.32
CACTIN-202ENST00000248420 CASC10Q5T4H9 136 aa13.03□□□□□ -0.32
CACTIN-202ENST00000248420 CSMD3Q7Z407 3707 aa13.02□□□□□ -0.32
CACTIN-202ENST00000248420 A0A0G2JQZ4 141 aa13.02□□□□□ -0.33
CACTIN-202ENST00000248420 A0A1W2PNN7 141 aa13.02□□□□□ -0.33
CACTIN-202ENST00000248420 PRYO14603 147 aa13.01□□□□□ -0.33
CACTIN-202ENST00000248420 KRTAP10-11P60412 298 aa13.01□□□□□ -0.33
CACTIN-202ENST00000248420 J3QKU1 62 aa13.01□□□□□ -0.33
CACTIN-202ENST00000248420 A0A0U1RQV1 116 aa13□□□□□ -0.33
CACTIN-202ENST00000248420 IGLV5-48A0A075B6I7 105 aa12.98□□□□□ -0.33
CACTIN-202ENST00000248420 ERC2-IT1O76042 136 aa12.98□□□□□ -0.33
CACTIN-202ENST00000248420 SRRM2Q9UQ35 2752 aaKnown RBP12.98□□□□□ -0.33
CACTIN-202ENST00000248420 DEFB131BA0A096LNP1 70 aa12.98□□□□□ -0.33
CACTIN-202ENST00000248420 C1orf137Q5JT78 98 aa12.98□□□□□ -0.33
CACTIN-202ENST00000248420 FUSP35637 526 aaKnown RBP eCLIP12.97□□□□□ -0.33
CACTIN-202ENST00000248420 Q6ZRX8 168 aa12.97□□□□□ -0.33
CACTIN-202ENST00000248420 LINC01556Q5JQF7 62 aa12.96□□□□□ -0.33
CACTIN-202ENST00000248420 COL6A5A8TX70 2615 aa12.95□□□□□ -0.34
CACTIN-202ENST00000248420 ETDCA0A1B0GVM5 59 aa12.95□□□□□ -0.34
CACTIN-202ENST00000248420 LRCOL1A6NCL2 159 aa12.95□□□□□ -0.34
CACTIN-202ENST00000248420 KRTAP7-1Q8IUC3 87 aa12.95□□□□□ -0.34
CACTIN-202ENST00000248420 H3BNG1 76 aa12.95□□□□□ -0.34
CACTIN-202ENST00000248420 KMT2BQ9UMN6 2715 aaPredicted RBP12.94□□□□□ -0.34
CACTIN-202ENST00000248420 LYSTQ99698 3801 aa12.93□□□□□ -0.34
CACTIN-202ENST00000248420 DEFB116Q30KQ4 102 aa12.93□□□□□ -0.34
CACTIN-202ENST00000248420 IGLV1-50A0A075B6I6 118 aa12.92□□□□□ -0.34
CACTIN-202ENST00000248420 KRTAP4-16G5E9R7 235 aaPredicted RBP12.91□□□□□ -0.34
CACTIN-202ENST00000248420 K7EQZ3 153 aa12.91□□□□□ -0.34
CACTIN-202ENST00000248420 DHRS4-AS1Q9P1J3 65 aa12.91□□□□□ -0.34
CACTIN-202ENST00000248420 PRO0628Q9UI54 55 aa12.91□□□□□ -0.34
CACTIN-202ENST00000248420 DNAH10Q8IVF4 4471 aa12.9□□□□□ -0.34
CACTIN-202ENST00000248420 UBE2BP63146 152 aa12.9□□□□□ -0.34
CACTIN-202ENST00000248420 C11orf45Q8TAV5 145 aa12.9□□□□□ -0.34
CACTIN-202ENST00000248420 BRK1Q8WUW1 75 aa12.9□□□□□ -0.34
CACTIN-202ENST00000248420 ATP5EP56381 51 aaPredicted RBP12.89□□□□□ -0.35
CACTIN-202ENST00000248420 DSCR10P59022 87 aa12.88□□□□□ -0.35
CACTIN-202ENST00000248420 TNP2Q05952 138 aa12.88□□□□□ -0.35
CACTIN-202ENST00000248420 NBEAL1Q6ZS30 2694 aa12.88□□□□□ -0.35
CACTIN-202ENST00000248420 PKIGQ9Y2B9 76 aa12.88□□□□□ -0.35
CACTIN-202ENST00000248420 Q8NBF4 154 aa12.87□□□□□ -0.35
CACTIN-202ENST00000248420 CMYA5Q8N3K9 4069 aa12.87□□□□□ -0.35
CACTIN-202ENST00000248420 PRR4Q16378 134 aa12.86□□□□□ -0.35
CACTIN-202ENST00000248420 MRAPQ8TCY5 172 aa12.85□□□□□ -0.35
CACTIN-202ENST00000248420 DNAH1Q9P2D7 4330 aa12.85□□□□□ -0.35
CACTIN-202ENST00000248420 PRB2P02812 416 aaPredicted RBP12.85□□□□□ -0.35
CACTIN-202ENST00000248420 MRPL55Q7Z7F7 128 aaKnown RBP12.83□□□□□ -0.36
CACTIN-202ENST00000248420 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
CACTIN-202ENST00000248420 SPRR1AP35321 89 aa12.82□□□□□ -0.36
CACTIN-202ENST00000248420 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
CACTIN-202ENST00000248420 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
CACTIN-202ENST00000248420 LINC00476Q8WZB0 136 aa12.79□□□□□ -0.36
CACTIN-202ENST00000248420 SPRR4Q96PI1 79 aa12.79□□□□□ -0.36
CACTIN-202ENST00000248420 PRLHP81277 87 aa12.78□□□□□ -0.36
CACTIN-202ENST00000248420 F8WDY8 70 aa12.78□□□□□ -0.36
CACTIN-202ENST00000248420 PLA2G2DQ9UNK4 145 aa12.77□□□□□ -0.36
CACTIN-202ENST00000248420 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.76□□□□□ -0.37
CACTIN-202ENST00000248420 IGKV2-24A0A0C4DH68 120 aa12.76□□□□□ -0.37
CACTIN-202ENST00000248420 WFDC13Q8IUB5 93 aa12.76□□□□□ -0.37
CACTIN-202ENST00000248420 PSCAO43653 123 aa12.75□□□□□ -0.37
CACTIN-202ENST00000248420 REG3GQ6UW15 175 aa12.75□□□□□ -0.37
CACTIN-202ENST00000248420 C1orf64Q8NEQ6 169 aa12.75□□□□□ -0.37
CACTIN-202ENST00000248420 RPL37AP61513 92 aaKnown RBP12.74□□□□□ -0.37
CACTIN-202ENST00000248420 COL7A1Q02388 2944 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms