RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 RPL37AP8A6NKH3 93 aa16.67■□□□□ 0.26
RAB40C-201ENST00000248139 NKAPP1Q8N9T2 125 aa16.65■□□□□ 0.26
RAB40C-201ENST00000248139 C7orf33Q8WU49 177 aa16.65■□□□□ 0.26
RAB40C-201ENST00000248139 HUWE1Q7Z6Z7 4374 aaKnown RBP16.65■□□□□ 0.26
RAB40C-201ENST00000248139 DNAH1Q9P2D7 4330 aa16.64■□□□□ 0.26
RAB40C-201ENST00000248139 TRAV10A0A0B4J240 114 aa16.64■□□□□ 0.26
RAB40C-201ENST00000248139 LINC00588Q9Y4M8 146 aa16.64■□□□□ 0.26
RAB40C-201ENST00000248139 DNAH10Q8IVF4 4471 aa16.63■□□□□ 0.25
RAB40C-201ENST00000248139 TRBV7-6A0A0J9YX20 115 aa16.63■□□□□ 0.25
RAB40C-201ENST00000248139 DNAH10OSP0CZ25 163 aa16.62■□□□□ 0.25
RAB40C-201ENST00000248139 PDE6GP18545 87 aa16.61■□□□□ 0.25
RAB40C-201ENST00000248139 C20orf197Q8N268 126 aa16.6■□□□□ 0.25
RAB40C-201ENST00000248139 Q8N9L7 120 aa16.58■□□□□ 0.25
RAB40C-201ENST00000248139 MGAM2Q2M2H8 2515 aa16.58■□□□□ 0.24
RAB40C-201ENST00000248139 H3BQ85 93 aa16.57■□□□□ 0.24
RAB40C-201ENST00000248139 KCNQ1DNQ9H478 68 aa16.55■□□□□ 0.24
RAB40C-201ENST00000248139 CSMD3Q7Z407 3707 aa16.55■□□□□ 0.24
RAB40C-201ENST00000248139 C3orf84H3BNL1 204 aa16.55■□□□□ 0.24
RAB40C-201ENST00000248139 Q8N377 158 aa16.53■□□□□ 0.24
RAB40C-201ENST00000248139 KRTAP7-1Q8IUC3 87 aa16.53■□□□□ 0.24
RAB40C-201ENST00000248139 CXCL6P80162 114 aa16.51■□□□□ 0.23
RAB40C-201ENST00000248139 ST20-AS1Q8NBB2 130 aa16.5■□□□□ 0.23
RAB40C-201ENST00000248139 FAM19A5Q7Z5A7 132 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-201ENST00000248139 Q9BRP9 147 aa16.49■□□□□ 0.23
RAB40C-201ENST00000248139 STAB2Q8WWQ8 2551 aa16.49■□□□□ 0.23
RAB40C-201ENST00000248139 COL7A1Q02388 2944 aa16.48■□□□□ 0.23
RAB40C-201ENST00000248139 TMEM258P61165 79 aa16.47■□□□□ 0.23
RAB40C-201ENST00000248139 DPH3Q96FX2 82 aa16.47■□□□□ 0.23
RAB40C-201ENST00000248139 SNURFQ9Y675 71 aa16.46■□□□□ 0.23
RAB40C-201ENST00000248139 DNAH9Q9NYC9 4486 aa16.46■□□□□ 0.23
RAB40C-201ENST00000248139 J3KT08 172 aa16.46■□□□□ 0.23
RAB40C-201ENST00000248139 TENM2Q9NT68 2774 aa16.45■□□□□ 0.22
RAB40C-201ENST00000248139 OXTP01178 125 aa16.44■□□□□ 0.22
RAB40C-201ENST00000248139 TM2D3Q9BRN9 247 aa16.44■□□□□ 0.22
RAB40C-201ENST00000248139 IGLV1-50A0A075B6I6 118 aa16.43■□□□□ 0.22
RAB40C-201ENST00000248139 F8WDY8 70 aa16.43■□□□□ 0.22
RAB40C-201ENST00000248139 Q6ZRX8 168 aa16.43■□□□□ 0.22
RAB40C-201ENST00000248139 TRAV7A0A075B6U4 112 aa16.42■□□□□ 0.22
RAB40C-201ENST00000248139 K7EIL1 84 aa16.42■□□□□ 0.22
RAB40C-201ENST00000248139 BPY2O14599 106 aa16.42■□□□□ 0.22
RAB40C-201ENST00000248139 ERC2-IT1O76042 136 aa16.42■□□□□ 0.22
RAB40C-201ENST00000248139 TLX1NBP0CAT3 122 aa16.42■□□□□ 0.22
RAB40C-201ENST00000248139 ETDCA0A1B0GVM5 59 aa16.42■□□□□ 0.22
RAB40C-201ENST00000248139 NREPQ16612 68 aa16.42■□□□□ 0.22
RAB40C-201ENST00000248139 SVIPQ8NHG7 77 aa16.42■□□□□ 0.22
RAB40C-201ENST00000248139 KRTAP4-16G5E9R7 235 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-201ENST00000248139 RMI2Q96E14 147 aa16.39■□□□□ 0.21
RAB40C-201ENST00000248139 MRPL55Q7Z7F7 128 aaKnown RBP16.36■□□□□ 0.21
RAB40C-201ENST00000248139 SRRM2Q9UQ35 2752 aaKnown RBP16.35■□□□□ 0.21
RAB40C-201ENST00000248139 KRTAP1-5Q9BYS1 174 aa16.34■□□□□ 0.21
RAB40C-201ENST00000248139 PLA2G2DQ9UNK4 145 aa16.34■□□□□ 0.21
RAB40C-201ENST00000248139 A0A0G2JQZ4 141 aa16.34■□□□□ 0.21
RAB40C-201ENST00000248139 A0A1W2PNN7 141 aa16.34■□□□□ 0.21
RAB40C-201ENST00000248139 IGKV2-24A0A0C4DH68 120 aa16.33■□□□□ 0.21
RAB40C-201ENST00000248139 UBE2BP63146 152 aa16.33■□□□□ 0.21
RAB40C-201ENST00000248139 DHRS4-AS1Q9P1J3 65 aa16.33■□□□□ 0.21
RAB40C-201ENST00000248139 A0A1W2PNM2 257 aa16.33■□□□□ 0.2
RAB40C-201ENST00000248139 IGKV4-1P06312 121 aa16.33■□□□□ 0.2
RAB40C-201ENST00000248139 IGLV5-48A0A075B6I7 105 aa16.32■□□□□ 0.2
RAB40C-201ENST00000248139 H7BZZ5 65 aa16.32■□□□□ 0.2
RAB40C-201ENST00000248139 PRYO14603 147 aa16.32■□□□□ 0.2
RAB40C-201ENST00000248139 SPRR1AP35321 89 aa16.32■□□□□ 0.2
RAB40C-201ENST00000248139 RPS28P62857 69 aaKnown RBP16.31■□□□□ 0.2
RAB40C-201ENST00000248139 DNAH7Q8WXX0 4024 aa16.3■□□□□ 0.2
RAB40C-201ENST00000248139 IGLV5-37A0A075B6J1 123 aa16.29■□□□□ 0.2
RAB40C-201ENST00000248139 C1orf137Q5JT78 98 aa16.29■□□□□ 0.2
RAB40C-201ENST00000248139 BCE1O60756 84 aa16.27■□□□□ 0.19
RAB40C-201ENST00000248139 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-201ENST00000248139 A0A096LNI7 61 aa16.25■□□□□ 0.19
RAB40C-201ENST00000248139 FUSP35637 526 aaKnown RBP eCLIP16.24■□□□□ 0.192e-6■■■□□ 19.1
RAB40C-201ENST00000248139 TNP2Q05952 138 aa16.24■□□□□ 0.19
RAB40C-201ENST00000248139 FAM236DA0A1B0GTK5 79 aa16.23■□□□□ 0.19
RAB40C-201ENST00000248139 F8WEM9 126 aa16.23■□□□□ 0.19
RAB40C-201ENST00000248139 FAM236CP0DP71 79 aa16.23■□□□□ 0.19
RAB40C-201ENST00000248139 PRLHP81277 87 aa16.23■□□□□ 0.19
RAB40C-201ENST00000248139 KLKP1Q107X0 134 aa16.23■□□□□ 0.19
RAB40C-201ENST00000248139 REG3GQ6UW15 175 aa16.23■□□□□ 0.19
RAB40C-201ENST00000248139 PSCAO43653 123 aa16.18■□□□□ 0.18
RAB40C-201ENST00000248139 CHTF8P0CG12 524 aa16.17■□□□□ 0.18
RAB40C-201ENST00000248139 Q8NBF4 154 aa16.17■□□□□ 0.18
RAB40C-201ENST00000248139 SMIM29Q86T20 159 aa16.16■□□□□ 0.18
RAB40C-201ENST00000248139 HIGD2AQ9BW72 106 aa16.14■□□□□ 0.17
RAB40C-201ENST00000248139 PLECQ15149 4684 aaKnown RBP16.14■□□□□ 0.17
RAB40C-201ENST00000248139 TMEM254Q8TBM7 123 aa16.13■□□□□ 0.17
RAB40C-201ENST00000248139 DEFB116Q30KQ4 102 aa16.13■□□□□ 0.17
RAB40C-201ENST00000248139 LINC00476Q8WZB0 136 aa16.12■□□□□ 0.17
RAB40C-201ENST00000248139 OCR1Q9BZK8 76 aa16.12■□□□□ 0.17
RAB40C-201ENST00000248139 C4orf26Q17RF5 130 aa16.12■□□□□ 0.17
RAB40C-201ENST00000248139 KRTAP11-1Q8IUC1 163 aa16.12■□□□□ 0.17
RAB40C-201ENST00000248139 UBE2DNLQ8IWF7 75 aa16.12■□□□□ 0.17
RAB40C-201ENST00000248139 FAM30AQ9NZY2 134 aa16.12■□□□□ 0.17
RAB40C-201ENST00000248139 C16orf90A8MZG2 172 aa16.08■□□□□ 0.16
RAB40C-201ENST00000248139 DSCR10P59022 87 aa16.07■□□□□ 0.16
RAB40C-201ENST00000248139 PHF5AQ7RTV0 110 aaKnown RBP16.07■□□□□ 0.16
RAB40C-201ENST00000248139 K7EQZ3 153 aa16.07■□□□□ 0.16
RAB40C-201ENST00000248139 SPRR4Q96PI1 79 aa16.07■□□□□ 0.16
RAB40C-201ENST00000248139 Q5XG85 94 aa16.06■□□□□ 0.16
RAB40C-201ENST00000248139 IGFL1Q6UW32 110 aa16.05■□□□□ 0.16
RAB40C-201ENST00000248139 EPM2AB3EWF7 344 aa16.02■□□□□ 0.15
RAB40C-201ENST00000248139 APLNQ9ULZ1 77 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms