RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TRBV7-6A0A0J9YX20 115 aa11.91□□□□□ -0.5
TNFSF9-201ENST00000245817 A0A1W2PNN7 141 aa11.91□□□□□ -0.5
TNFSF9-201ENST00000245817 COX7BP24311 80 aa11.91□□□□□ -0.5
TNFSF9-201ENST00000245817 FRAS1Q86XX4 4008 aa11.91□□□□□ -0.5
TNFSF9-201ENST00000245817 ANKRD29Q8N6D5 301 aa11.91□□□□□ -0.5
TNFSF9-201ENST00000245817 FUSP35637 526 aaKnown RBP eCLIP11.9□□□□□ -0.5
TNFSF9-201ENST00000245817 H3BT86 120 aa11.89□□□□□ -0.51
TNFSF9-201ENST00000245817 PRYO14603 147 aa11.89□□□□□ -0.51
TNFSF9-201ENST00000245817 SMCPP49901 116 aaPredicted RBP11.89□□□□□ -0.51
TNFSF9-201ENST00000245817 LINC00575Q6W349 94 aa11.88□□□□□ -0.51
TNFSF9-201ENST00000245817 hADV29S1A0JD25 119 aa11.87□□□□□ -0.51
TNFSF9-201ENST00000245817 ELOF1P60002 83 aaKnown RBP11.87□□□□□ -0.51
TNFSF9-201ENST00000245817 DNAH17Q9UFH2 4485 aa11.87□□□□□ -0.51
TNFSF9-201ENST00000245817 ETDBQ3ZM63 59 aa11.87□□□□□ -0.51
TNFSF9-201ENST00000245817 BAALC-AS2P0C853 105 aa11.86□□□□□ -0.51
TNFSF9-201ENST00000245817 SPACA4Q8TDM5 124 aa11.85□□□□□ -0.51
TNFSF9-201ENST00000245817 UBE2BP63146 152 aa11.84□□□□□ -0.51
TNFSF9-201ENST00000245817 ETDCA0A1B0GVM5 59 aa11.84□□□□□ -0.51
TNFSF9-201ENST00000245817 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
TNFSF9-201ENST00000245817 REG3GQ6UW15 175 aa11.83□□□□□ -0.52
TNFSF9-201ENST00000245817 TEN1Q86WV5 123 aa11.83□□□□□ -0.52
TNFSF9-201ENST00000245817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.83□□□□□ -0.52
TNFSF9-201ENST00000245817 PANO1I0J062 215 aa11.82□□□□□ -0.52
TNFSF9-201ENST00000245817 PHF5AQ7RTV0 110 aaKnown RBP11.82□□□□□ -0.52
TNFSF9-201ENST00000245817 LINC01600Q96MT4 127 aa11.82□□□□□ -0.52
TNFSF9-201ENST00000245817 FAT2Q9NYQ8 4349 aa11.82□□□□□ -0.52
TNFSF9-201ENST00000245817 SPRR1AP35321 89 aa11.8□□□□□ -0.52
TNFSF9-201ENST00000245817 LINC00336Q6ZUF6 198 aa11.8□□□□□ -0.52
TNFSF9-201ENST00000245817 LINC00528Q8N1L1 170 aa11.8□□□□□ -0.52
TNFSF9-201ENST00000245817 INAFM2P0DMQ5 153 aa11.79□□□□□ -0.52
TNFSF9-201ENST00000245817 KRTAP10-2P60368 255 aa11.79□□□□□ -0.52
TNFSF9-201ENST00000245817 GHRHP01286 108 aa11.78□□□□□ -0.52
TNFSF9-201ENST00000245817 Q6ZRX8 168 aa11.78□□□□□ -0.52
TNFSF9-201ENST00000245817 B5MCH6 92 aa11.77□□□□□ -0.53
TNFSF9-201ENST00000245817 TMEM256-PLSCR3K7ERE1 68 aa11.77□□□□□ -0.53
TNFSF9-201ENST00000245817 OCIAD2Q56VL3 154 aa11.77□□□□□ -0.53
TNFSF9-201ENST00000245817 DHRS4-AS1Q9P1J3 65 aa11.77□□□□□ -0.53
TNFSF9-201ENST00000245817 KRTAP4-16G5E9R7 235 aaPredicted RBP11.76□□□□□ -0.53
TNFSF9-201ENST00000245817 H3BQ85 93 aa11.76□□□□□ -0.53
TNFSF9-201ENST00000245817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.76□□□□□ -0.53
TNFSF9-201ENST00000245817 Q6ZQY7 126 aa11.76□□□□□ -0.53
TNFSF9-201ENST00000245817 PPDPFLQ8WWR9 84 aa11.76□□□□□ -0.53
TNFSF9-201ENST00000245817 J3QR89 54 aa11.75□□□□□ -0.53
TNFSF9-201ENST00000245817 K7ERU9 68 aa11.75□□□□□ -0.53
TNFSF9-201ENST00000245817 EPM2AB3EWF7 344 aa11.74□□□□□ -0.53
TNFSF9-201ENST00000245817 FAM19A1Q7Z5A9 133 aa11.74□□□□□ -0.53
TNFSF9-201ENST00000245817 PLAC8Q9NZF1 115 aa11.74□□□□□ -0.53
TNFSF9-201ENST00000245817 TEX49A0A1B0GTD5 131 aa11.72□□□□□ -0.53
TNFSF9-201ENST00000245817 DNAH11Q96DT5 4516 aa11.7□□□□□ -0.54
TNFSF9-201ENST00000245817 PKD1P98161 4303 aa11.7□□□□□ -0.54
TNFSF9-201ENST00000245817 KRTAP11-1Q8IUC1 163 aa11.68□□□□□ -0.54
TNFSF9-201ENST00000245817 Q9BRP9 147 aa11.68□□□□□ -0.54
TNFSF9-201ENST00000245817 HECTD4Q9Y4D8 3996 aa11.68□□□□□ -0.54
TNFSF9-201ENST00000245817 UBE2AP49459 152 aa11.67□□□□□ -0.54
TNFSF9-201ENST00000245817 PRLHP81277 87 aa11.66□□□□□ -0.54
TNFSF9-201ENST00000245817 LAMTOR3Q9UHA4 124 aa11.66□□□□□ -0.54
TNFSF9-201ENST00000245817 JMJD7-PLA2G4BH0Y9G9 81 aa11.65□□□□□ -0.54
TNFSF9-201ENST00000245817 BCE1O60756 84 aa11.65□□□□□ -0.54
TNFSF9-201ENST00000245817 KRTAP10-1P60331 282 aa11.65□□□□□ -0.55
TNFSF9-201ENST00000245817 DEFB105AQ8NG35 78 aa11.65□□□□□ -0.55
TNFSF9-201ENST00000245817 H0Y9J4 135 aa11.64□□□□□ -0.55
TNFSF9-201ENST00000245817 HIGD2AQ9BW72 106 aa11.64□□□□□ -0.55
TNFSF9-201ENST00000245817 FAM30AQ9NZY2 134 aa11.64□□□□□ -0.55
TNFSF9-201ENST00000245817 SMCR5Q8TEV8 140 aa11.62□□□□□ -0.55
TNFSF9-201ENST00000245817 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
TNFSF9-201ENST00000245817 CIRBP-AS1Q8TBR5 109 aa11.62□□□□□ -0.55
TNFSF9-201ENST00000245817 DNAH5Q8TE73 4624 aa11.61□□□□□ -0.55
TNFSF9-201ENST00000245817 A0A1B0GV72 72 aa11.61□□□□□ -0.55
TNFSF9-201ENST00000245817 Q6ZSA8 131 aa11.61□□□□□ -0.55
TNFSF9-201ENST00000245817 ERC2-IT1O76042 136 aa11.6□□□□□ -0.55
TNFSF9-201ENST00000245817 OBSCN-AS1Q96MR7 158 aa11.59□□□□□ -0.55
TNFSF9-201ENST00000245817 RBM3P98179 157 aaKnown RBP11.59□□□□□ -0.55
TNFSF9-201ENST00000245817 C14orf132Q9NPU4 83 aa11.59□□□□□ -0.55
TNFSF9-201ENST00000245817 PSORS1C2Q9UIG4 136 aa11.59□□□□□ -0.55
TNFSF9-201ENST00000245817 PKHD1P08F94 4074 aa11.58□□□□□ -0.56
TNFSF9-201ENST00000245817 NDUFV3P56181 108 aaKnown RBP11.58□□□□□ -0.56
TNFSF9-201ENST00000245817 SCXQ7RTU7 201 aa11.58□□□□□ -0.56
TNFSF9-201ENST00000245817 ST20-AS1Q8NBB2 130 aa11.58□□□□□ -0.56
TNFSF9-201ENST00000245817 C1orf137Q5JT78 98 aa11.57□□□□□ -0.56
TNFSF9-201ENST00000245817 Q8N377 158 aa11.56□□□□□ -0.56
TNFSF9-201ENST00000245817 IGLV5-48A0A075B6I7 105 aa11.55□□□□□ -0.56
TNFSF9-201ENST00000245817 DSCR8Q96T75 97 aa11.55□□□□□ -0.56
TNFSF9-201ENST00000245817 LINC01547P58512 204 aaPredicted RBP11.54□□□□□ -0.56
TNFSF9-201ENST00000245817 EPPK1P58107 5090 aaKnown RBP11.53□□□□□ -0.56
TNFSF9-201ENST00000245817 GAGE2AQ6NT46 116 aa11.52□□□□□ -0.56
TNFSF9-201ENST00000245817 KRTAP13-1Q8IUC0 172 aa11.52□□□□□ -0.56
TNFSF9-201ENST00000245817 VPS25Q9BRG1 176 aa11.52□□□□□ -0.56
TNFSF9-201ENST00000245817 HAMPP81172 84 aa11.51□□□□□ -0.57
TNFSF9-201ENST00000245817 PDE6GP18545 87 aa11.5□□□□□ -0.57
TNFSF9-201ENST00000245817 DYNC1H1Q14204 4646 aaKnown RBP11.5□□□□□ -0.57
TNFSF9-201ENST00000245817 ACYP1P07311 99 aa11.49□□□□□ -0.57
TNFSF9-201ENST00000245817 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
TNFSF9-201ENST00000245817 FAM240AA0A1B0GVK7 77 aa11.49□□□□□ -0.57
TNFSF9-201ENST00000245817 ZNF861PO60384 105 aa11.49□□□□□ -0.57
TNFSF9-201ENST00000245817 F8WEM9 126 aa11.48□□□□□ -0.57
TNFSF9-201ENST00000245817 CCKP06307 115 aa11.48□□□□□ -0.57
TNFSF9-201ENST00000245817 LOC110117498A0A087WWA1 95 aa11.47□□□□□ -0.57
TNFSF9-201ENST00000245817 C3orf22Q8N5N4 141 aa11.47□□□□□ -0.57
TNFSF9-201ENST00000245817 IGLV7-43P04211 117 aa11.46□□□□□ -0.57
TNFSF9-201ENST00000245817 ZNF706Q9Y5V0 76 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms