RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
USB1-201ENST00000219281 BAHCC1Q9P281 2608 aa11.35□□□□□ -0.59
USB1-201ENST00000219281 NOTCH1P46531 2555 aa11.33□□□□□ -0.6
USB1-201ENST00000219281 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
USB1-201ENST00000219281 LINC01556Q5JQF7 62 aa11.3□□□□□ -0.6
USB1-201ENST00000219281 H7BZZ5 65 aa11.29□□□□□ -0.6
USB1-201ENST00000219281 SNURFQ9Y675 71 aa11.29□□□□□ -0.6
USB1-201ENST00000219281 SERTAD4-AS1Q5TG53 156 aa11.29□□□□□ -0.6
USB1-201ENST00000219281 FAM236DA0A1B0GTK5 79 aa11.28□□□□□ -0.6
USB1-201ENST00000219281 FAM236CP0DP71 79 aa11.28□□□□□ -0.6
USB1-201ENST00000219281 NKAPP1Q8N9T2 125 aa11.28□□□□□ -0.6
USB1-201ENST00000219281 DEFB105AQ8NG35 78 aa11.28□□□□□ -0.6
USB1-201ENST00000219281 DEFB131BA0A096LNP1 70 aa11.28□□□□□ -0.6
USB1-201ENST00000219281 TM2D3Q9BRN9 247 aa11.28□□□□□ -0.6
USB1-201ENST00000219281 KLKP1Q107X0 134 aa11.27□□□□□ -0.61
USB1-201ENST00000219281 RMI2Q96E14 147 aa11.27□□□□□ -0.61
USB1-201ENST00000219281 KCNQ1DNQ9H478 68 aa11.27□□□□□ -0.61
USB1-201ENST00000219281 C7orf33Q8WU49 177 aa11.26□□□□□ -0.61
USB1-201ENST00000219281 F8WDY8 70 aa11.26□□□□□ -0.61
USB1-201ENST00000219281 Q8N9L7 120 aa11.26□□□□□ -0.61
USB1-201ENST00000219281 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
USB1-201ENST00000219281 PRB2P02812 416 aaPredicted RBP11.24□□□□□ -0.61
USB1-201ENST00000219281 NREPQ16612 68 aa11.24□□□□□ -0.61
USB1-201ENST00000219281 C3orf84H3BNL1 204 aa11.23□□□□□ -0.61
USB1-201ENST00000219281 Q8N377 158 aa11.23□□□□□ -0.61
USB1-201ENST00000219281 C11orf45Q8TAV5 145 aa11.23□□□□□ -0.61
USB1-201ENST00000219281 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
USB1-201ENST00000219281 BPY2O14599 106 aa11.21□□□□□ -0.61
USB1-201ENST00000219281 C5orf47Q569G3 176 aa11.21□□□□□ -0.61
USB1-201ENST00000219281 RPL37AP8A6NKH3 93 aa11.21□□□□□ -0.62
USB1-201ENST00000219281 Q5XG85 94 aa11.21□□□□□ -0.62
USB1-201ENST00000219281 F8WEM9 126 aa11.2□□□□□ -0.62
USB1-201ENST00000219281 IGKV4-1P06312 121 aa11.2□□□□□ -0.62
USB1-201ENST00000219281 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
USB1-201ENST00000219281 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
USB1-201ENST00000219281 DNAH10OSP0CZ25 163 aa11.19□□□□□ -0.62
USB1-201ENST00000219281 SERP1Q9Y6X1 66 aa11.18□□□□□ -0.62
USB1-201ENST00000219281 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
USB1-201ENST00000219281 CASC10Q5T4H9 136 aa11.17□□□□□ -0.62
USB1-201ENST00000219281 IGLV5-48A0A075B6I7 105 aa11.16□□□□□ -0.62
USB1-201ENST00000219281 DHRS4-AS1Q9P1J3 65 aa11.16□□□□□ -0.62
USB1-201ENST00000219281 Q6ZRX8 168 aa11.16□□□□□ -0.62
USB1-201ENST00000219281 Q9BRP9 147 aa11.16□□□□□ -0.62
USB1-201ENST00000219281 PLA2G2DQ9UNK4 145 aa11.15□□□□□ -0.62
USB1-201ENST00000219281 IGLV1-50A0A075B6I6 118 aa11.15□□□□□ -0.62
USB1-201ENST00000219281 K7EIL1 84 aa11.15□□□□□ -0.62
USB1-201ENST00000219281 EPM2AB3EWF7 344 aa11.14□□□□□ -0.63
USB1-201ENST00000219281 MRAPQ8TCY5 172 aa11.14□□□□□ -0.63
USB1-201ENST00000219281 MGAM2Q2M2H8 2515 aa11.14□□□□□ -0.63
USB1-201ENST00000219281 ETDCA0A1B0GVM5 59 aa11.14□□□□□ -0.63
USB1-201ENST00000219281 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
USB1-201ENST00000219281 HRCT1Q6UXD1 115 aa11.14□□□□□ -0.63
USB1-201ENST00000219281 ST20-AS1Q8NBB2 130 aa11.13□□□□□ -0.63
USB1-201ENST00000219281 TMEM254Q8TBM7 123 aa11.13□□□□□ -0.63
USB1-201ENST00000219281 PRYO14603 147 aa11.12□□□□□ -0.63
USB1-201ENST00000219281 LINC00588Q9Y4M8 146 aa11.12□□□□□ -0.63
USB1-201ENST00000219281 NDUFC1O43677 76 aa11.12□□□□□ -0.63
USB1-201ENST00000219281 KRTAP7-1Q8IUC3 87 aa11.12□□□□□ -0.63
USB1-201ENST00000219281 A0A1W2PNM2 257 aa11.11□□□□□ -0.63
USB1-201ENST00000219281 FUSP35637 526 aaKnown RBP eCLIP11.11□□□□□ -0.63
USB1-201ENST00000219281 IGLV5-37A0A075B6J1 123 aa11.11□□□□□ -0.63
USB1-201ENST00000219281 SPRR1AP35321 89 aa11.1□□□□□ -0.63
USB1-201ENST00000219281 OCR1Q9BZK8 76 aa11.1□□□□□ -0.63
USB1-201ENST00000219281 C1orf137Q5JT78 98 aa11.1□□□□□ -0.63
USB1-201ENST00000219281 ERC2-IT1O76042 136 aa11.09□□□□□ -0.63
USB1-201ENST00000219281 TNP2Q05952 138 aa11.08□□□□□ -0.64
USB1-201ENST00000219281 MRPL55Q7Z7F7 128 aaKnown RBP11.06□□□□□ -0.64
USB1-201ENST00000219281 DNAH1Q9P2D7 4330 aa11.06□□□□□ -0.64
USB1-201ENST00000219281 A0A1B0GW54 56 aa11.05□□□□□ -0.64
USB1-201ENST00000219281 Q8NBF4 154 aa11.05□□□□□ -0.64
USB1-201ENST00000219281 A0A0U1RQV1 116 aa11.04□□□□□ -0.64
USB1-201ENST00000219281 UBE2BP63146 152 aa11.04□□□□□ -0.64
USB1-201ENST00000219281 DNAH9Q9NYC9 4486 aa11.04□□□□□ -0.64
USB1-201ENST00000219281 SMIM29Q86T20 159 aa11.03□□□□□ -0.64
USB1-201ENST00000219281 ATP5EP56381 51 aaPredicted RBP11.02□□□□□ -0.65
USB1-201ENST00000219281 MDFIQ99750 246 aa11.02□□□□□ -0.65
USB1-201ENST00000219281 FAM30AQ9NZY2 134 aa11.02□□□□□ -0.65
USB1-201ENST00000219281 HIGD2AQ9BW72 106 aa11.01□□□□□ -0.65
USB1-201ENST00000219281 SPRR4Q96PI1 79 aa11.01□□□□□ -0.65
USB1-201ENST00000219281 COL7A1Q02388 2944 aa11□□□□□ -0.65
USB1-201ENST00000219281 SMIM26A0A096LP01 95 aa11□□□□□ -0.65
USB1-201ENST00000219281 REG3GQ6UW15 175 aa11□□□□□ -0.65
USB1-201ENST00000219281 FP248Q71RG6 208 aaPredicted RBP10.99□□□□□ -0.65
USB1-201ENST00000219281 DSCR10P59022 87 aa10.97□□□□□ -0.65
USB1-201ENST00000219281 LINC00474Q9P2X8 69 aa10.96□□□□□ -0.65
USB1-201ENST00000219281 A0A0G2JQZ4 141 aa10.96□□□□□ -0.66
USB1-201ENST00000219281 A0A1W2PNN7 141 aa10.96□□□□□ -0.66
USB1-201ENST00000219281 STAB2Q8WWQ8 2551 aa10.95□□□□□ -0.66
USB1-201ENST00000219281 LINC00476Q8WZB0 136 aa10.95□□□□□ -0.66
USB1-201ENST00000219281 LYSTQ99698 3801 aa10.95□□□□□ -0.66
USB1-201ENST00000219281 K7EQZ3 153 aa10.95□□□□□ -0.66
USB1-201ENST00000219281 IGKV2-24A0A0C4DH68 120 aa10.91□□□□□ -0.66
USB1-201ENST00000219281 PRLHP81277 87 aa10.91□□□□□ -0.66
USB1-201ENST00000219281 A0A096LNI7 61 aa10.91□□□□□ -0.66
USB1-201ENST00000219281 FAM229BQ4G0N7 80 aa10.9□□□□□ -0.66
USB1-201ENST00000219281 IGFL1Q6UW32 110 aa10.9□□□□□ -0.66
USB1-201ENST00000219281 LCE6AA0A183 80 aa10.89□□□□□ -0.67
USB1-201ENST00000219281 DNAH10Q8IVF4 4471 aa10.87□□□□□ -0.67
USB1-201ENST00000219281 DEFB116Q30KQ4 102 aa10.87□□□□□ -0.67
USB1-201ENST00000219281 LINC00336Q6ZUF6 198 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms