RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 STAB2Q8WWQ8 2551 aa8.64□□□□□ -1.03
CTNS-201ENST00000046640 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
CTNS-201ENST00000046640 Q8N9L7 120 aa8.64□□□□□ -1.03
CTNS-201ENST00000046640 LOC110117498A0A087WWA1 95 aa8.63□□□□□ -1.03
CTNS-201ENST00000046640 NDUFC2-KCTD14E9PQ53 114 aa8.63□□□□□ -1.03
CTNS-201ENST00000046640 DEFB105AQ8NG35 78 aa8.63□□□□□ -1.03
CTNS-201ENST00000046640 FAM236DA0A1B0GTK5 79 aa8.63□□□□□ -1.03
CTNS-201ENST00000046640 FAM236CP0DP71 79 aa8.63□□□□□ -1.03
CTNS-201ENST00000046640 VPREB1P12018 145 aa8.63□□□□□ -1.03
CTNS-201ENST00000046640 LINC00588Q9Y4M8 146 aa8.63□□□□□ -1.03
CTNS-201ENST00000046640 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.62□□□□□ -1.03
CTNS-201ENST00000046640 RMI2Q96E14 147 aa8.62□□□□□ -1.03
CTNS-201ENST00000046640 K7EIL1 84 aa8.61□□□□□ -1.03
CTNS-201ENST00000046640 SYCNQ0VAF6 134 aa8.61□□□□□ -1.03
CTNS-201ENST00000046640 H7BZZ5 65 aa8.6□□□□□ -1.03
CTNS-201ENST00000046640 TENM2Q9NT68 2774 aa8.6□□□□□ -1.03
CTNS-201ENST00000046640 TM2D3Q9BRN9 247 aa8.59□□□□□ -1.03
CTNS-201ENST00000046640 COL7A1Q02388 2944 aa8.59□□□□□ -1.03
CTNS-201ENST00000046640 ELOF1P60002 83 aaKnown RBP8.59□□□□□ -1.04
CTNS-201ENST00000046640 C3orf84H3BNL1 204 aa8.58□□□□□ -1.04
CTNS-201ENST00000046640 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
CTNS-201ENST00000046640 TRAV7A0A075B6U4 112 aa8.58□□□□□ -1.04
CTNS-201ENST00000046640 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
CTNS-201ENST00000046640 FAM168BA1KXE4 195 aa8.57□□□□□ -1.04
CTNS-201ENST00000046640 M0R378 163 aa8.57□□□□□ -1.04
CTNS-201ENST00000046640 RPL37AP8A6NKH3 93 aa8.57□□□□□ -1.04
CTNS-201ENST00000046640 LYSTQ99698 3801 aa8.57□□□□□ -1.04
CTNS-201ENST00000046640 SERP1Q9Y6X1 66 aa8.56□□□□□ -1.04
CTNS-201ENST00000046640 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
CTNS-201ENST00000046640 F8WEM9 126 aa8.55□□□□□ -1.04
CTNS-201ENST00000046640 HUWE1Q7Z6Z7 4374 aaKnown RBP8.55□□□□□ -1.04
CTNS-201ENST00000046640 DNAH3Q8TD57 4116 aa8.55□□□□□ -1.04
CTNS-201ENST00000046640 NKAPP1Q8N9T2 125 aa8.55□□□□□ -1.04
CTNS-201ENST00000046640 LINC00336Q6ZUF6 198 aa8.55□□□□□ -1.04
CTNS-201ENST00000046640 EPM2AB3EWF7 344 aa8.54□□□□□ -1.04
CTNS-201ENST00000046640 BPY2O14599 106 aa8.54□□□□□ -1.04
CTNS-201ENST00000046640 PDE6GP18545 87 aa8.54□□□□□ -1.04
CTNS-201ENST00000046640 CSMD3Q7Z407 3707 aa8.53□□□□□ -1.04
CTNS-201ENST00000046640 CXCL6P80162 114 aa8.53□□□□□ -1.04
CTNS-201ENST00000046640 KLKP1Q107X0 134 aa8.52□□□□□ -1.04
CTNS-201ENST00000046640 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.04
CTNS-201ENST00000046640 C7orf33Q8WU49 177 aa8.52□□□□□ -1.04
CTNS-201ENST00000046640 NREPQ16612 68 aa8.51□□□□□ -1.05
CTNS-201ENST00000046640 BCE1O60756 84 aa8.5□□□□□ -1.05
CTNS-201ENST00000046640 FP248Q71RG6 208 aaPredicted RBP8.5□□□□□ -1.05
CTNS-201ENST00000046640 PRO0628Q9UI54 55 aa8.48□□□□□ -1.05
CTNS-201ENST00000046640 LINC00474Q9P2X8 69 aa8.48□□□□□ -1.05
CTNS-201ENST00000046640 DNAH10Q8IVF4 4471 aa8.48□□□□□ -1.05
CTNS-201ENST00000046640 H3BQ85 93 aa8.47□□□□□ -1.05
CTNS-201ENST00000046640 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
CTNS-201ENST00000046640 SMIM26A0A096LP01 95 aa8.47□□□□□ -1.05
CTNS-201ENST00000046640 TRBV7-6A0A0J9YX20 115 aa8.47□□□□□ -1.05
CTNS-201ENST00000046640 KRTAP7-1Q8IUC3 87 aa8.46□□□□□ -1.05
CTNS-201ENST00000046640 Q8N377 158 aa8.46□□□□□ -1.06
CTNS-201ENST00000046640 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
CTNS-201ENST00000046640 ST20-AS1Q8NBB2 130 aa8.45□□□□□ -1.06
CTNS-201ENST00000046640 MDFIQ99750 246 aa8.45□□□□□ -1.06
CTNS-201ENST00000046640 IGKV4-1P06312 121 aa8.45□□□□□ -1.06
CTNS-201ENST00000046640 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
CTNS-201ENST00000046640 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.44□□□□□ -1.06
CTNS-201ENST00000046640 TMEM254Q8TBM7 123 aa8.43□□□□□ -1.06
CTNS-201ENST00000046640 UBE2DNLQ8IWF7 75 aa8.43□□□□□ -1.06
CTNS-201ENST00000046640 A0A0G2JQZ4 141 aa8.43□□□□□ -1.06
CTNS-201ENST00000046640 A0A1W2PNN7 141 aa8.43□□□□□ -1.06
CTNS-201ENST00000046640 PSCAO43653 123 aa8.43□□□□□ -1.06
CTNS-201ENST00000046640 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
CTNS-201ENST00000046640 PKIGQ9Y2B9 76 aa8.42□□□□□ -1.06
CTNS-201ENST00000046640 ETDCA0A1B0GVM5 59 aa8.41□□□□□ -1.06
CTNS-201ENST00000046640 Q9BRP9 147 aa8.41□□□□□ -1.06
CTNS-201ENST00000046640 F8WDY8 70 aa8.41□□□□□ -1.06
CTNS-201ENST00000046640 HIGD2AQ9BW72 106 aa8.41□□□□□ -1.06
CTNS-201ENST00000046640 IGLV1-50A0A075B6I6 118 aa8.4□□□□□ -1.06
CTNS-201ENST00000046640 TLX1NBP0CAT3 122 aa8.4□□□□□ -1.06
CTNS-201ENST00000046640 DNAH1Q9P2D7 4330 aa8.4□□□□□ -1.06
CTNS-201ENST00000046640 NDUFC1O43677 76 aa8.4□□□□□ -1.07
CTNS-201ENST00000046640 ERC2-IT1O76042 136 aa8.4□□□□□ -1.07
CTNS-201ENST00000046640 MRPL55Q7Z7F7 128 aaKnown RBP8.4□□□□□ -1.07
CTNS-201ENST00000046640 DNAH9Q9NYC9 4486 aa8.39□□□□□ -1.07
CTNS-201ENST00000046640 SRRM2Q9UQ35 2752 aaKnown RBP8.39□□□□□ -1.07
CTNS-201ENST00000046640 UBE2BP63146 152 aa8.39□□□□□ -1.07
CTNS-201ENST00000046640 Q6ZRX8 168 aa8.39□□□□□ -1.07
CTNS-201ENST00000046640 SMIM29Q86T20 159 aa8.39□□□□□ -1.07
CTNS-201ENST00000046640 A0A096LNI7 61 aa8.38□□□□□ -1.07
CTNS-201ENST00000046640 A0A1W2PNM2 257 aa8.38□□□□□ -1.07
CTNS-201ENST00000046640 FUSP35637 526 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNS-201ENST00000046640 FAM229BQ4G0N7 80 aa8.37□□□□□ -1.07
CTNS-201ENST00000046640 C1orf137Q5JT78 98 aa8.37□□□□□ -1.07
CTNS-201ENST00000046640 MPLKIPQ8TAP9 179 aa8.37□□□□□ -1.07
CTNS-201ENST00000046640 BRK1Q8WUW1 75 aa8.37□□□□□ -1.07
CTNS-201ENST00000046640 DNAH7Q8WXX0 4024 aa8.37□□□□□ -1.07
CTNS-201ENST00000046640 DEFB116Q30KQ4 102 aa8.37□□□□□ -1.07
CTNS-201ENST00000046640 CHTF8P0CG12 524 aa8.36□□□□□ -1.07
CTNS-201ENST00000046640 KRTAP4-16G5E9R7 235 aaPredicted RBP8.36□□□□□ -1.07
CTNS-201ENST00000046640 OCR1Q9BZK8 76 aa8.36□□□□□ -1.07
CTNS-201ENST00000046640 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
CTNS-201ENST00000046640 PRYO14603 147 aa8.35□□□□□ -1.07
CTNS-201ENST00000046640 PLA2G2DQ9UNK4 145 aa8.35□□□□□ -1.07
CTNS-201ENST00000046640 ATP5EP56381 51 aaPredicted RBP8.34□□□□□ -1.07
CTNS-201ENST00000046640 PRLHP81277 87 aa8.34□□□□□ -1.07
CTNS-201ENST00000046640 APLNQ9ULZ1 77 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms