RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 HIGD2BQ4VC39 106 aa5.56□□□□□ -1.52
PNKP-231ENST00000640501 C9orf116Q5BN46 136 aaPredicted RBP5.56□□□□□ -1.52
PNKP-231ENST00000640501 KRTAP26-1Q6PEX3 210 aa5.56□□□□□ -1.52
PNKP-231ENST00000640501 Q9HAA7 133 aa5.56□□□□□ -1.52
PNKP-231ENST00000640501 ORMDL1Q9P0S3 153 aa5.56□□□□□ -1.52
PNKP-231ENST00000640501 C6orf48Q9UBA6 75 aa5.56□□□□□ -1.52
PNKP-231ENST00000640501 PKIGQ9Y2B9 76 aa5.56□□□□□ -1.52
PNKP-231ENST00000640501 NCR3O14931 201 aa5.55□□□□□ -1.52
PNKP-231ENST00000640501 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
PNKP-231ENST00000640501 C10orf25Q5T742 122 aa5.55□□□□□ -1.52
PNKP-231ENST00000640501 C15orf56Q8N910 161 aa5.55□□□□□ -1.52
PNKP-231ENST00000640501 TRRAPQ9Y4A5 3859 aa5.55□□□□□ -1.52
PNKP-231ENST00000640501 TEX49A0A1B0GTD5 131 aa5.54□□□□□ -1.52
PNKP-231ENST00000640501 TMEM256-PLSCR3K7ERE1 68 aa5.54□□□□□ -1.52
PNKP-231ENST00000640501 M0R378 163 aa5.54□□□□□ -1.52
PNKP-231ENST00000640501 LECT2O14960 151 aa5.54□□□□□ -1.52
PNKP-231ENST00000640501 Q6ZRU5 148 aa5.54□□□□□ -1.52
PNKP-231ENST00000640501 MDFIQ99750 246 aa5.54□□□□□ -1.52
PNKP-231ENST00000640501 TRAV23DV6A0A075B6W5 121 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 TRBV7-6A0A0J9YX20 115 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 JMJD7-PLA2G4BH0Y9G9 81 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 IGLV6-57P01721 117 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 RPL18AQ02543 176 aaKnown RBP5.53□□□□□ -1.52
PNKP-231ENST00000640501 C21orf62-AS1Q17RA5 79 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 C14orf177Q52M58 125 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 TTC32Q5I0X7 151 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 NKAPP1Q8N9T2 125 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 DIRC1Q969H9 104 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 LINC00526Q96FQ7 95 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 NOTCH1P46531 2555 aa5.53□□□□□ -1.52
PNKP-231ENST00000640501 A0A087WYN8 130 aa5.52□□□□□ -1.53
PNKP-231ENST00000640501 PSCAO43653 123 aa5.52□□□□□ -1.53
PNKP-231ENST00000640501 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
PNKP-231ENST00000640501 PCP4P48539 62 aa5.52□□□□□ -1.53
PNKP-231ENST00000640501 Q8N814 137 aa5.52□□□□□ -1.53
PNKP-231ENST00000640501 FAM218AQ96MZ4 157 aa5.52□□□□□ -1.53
PNKP-231ENST00000640501 NBEAL1Q6ZS30 2694 aa5.52□□□□□ -1.53
PNKP-231ENST00000640501 hADV29S1A0JD25 119 aa5.51□□□□□ -1.53
PNKP-231ENST00000640501 USP17L23D6RBM5 183 aa5.51□□□□□ -1.53
PNKP-231ENST00000640501 PRR3P79522 188 aaKnown RBP5.51□□□□□ -1.53
PNKP-231ENST00000640501 C6orf99Q4VX62 202 aa5.51□□□□□ -1.53
PNKP-231ENST00000640501 XAGE1AQ9HD64 81 aa5.51□□□□□ -1.53
PNKP-231ENST00000640501 TENM3Q9P273 2699 aa5.5□□□□□ -1.53
PNKP-231ENST00000640501 GAGE2EQ4V326 116 aa5.5□□□□□ -1.53
PNKP-231ENST00000640501 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
PNKP-231ENST00000640501 GAGE2DQ9UEU5 116 aa5.5□□□□□ -1.53
PNKP-231ENST00000640501 APLNQ9ULZ1 77 aa5.5□□□□□ -1.53
PNKP-231ENST00000640501 PLA2G2DQ9UNK4 145 aa5.5□□□□□ -1.53
PNKP-231ENST00000640501 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
PNKP-231ENST00000640501 LOC107984640A0A0U1RRK4 108 aa5.49□□□□□ -1.53
PNKP-231ENST00000640501 ZNF73O43830 326 aaPredicted RBP5.49□□□□□ -1.53
PNKP-231ENST00000640501 VPREB1P12018 145 aa5.49□□□□□ -1.53
PNKP-231ENST00000640501 COX7BP24311 80 aa5.49□□□□□ -1.53
PNKP-231ENST00000640501 LINC00575Q6W349 94 aa5.49□□□□□ -1.53
PNKP-231ENST00000640501 MGAM2Q2M2H8 2515 aa5.47□□□□□ -1.53
PNKP-231ENST00000640501 ANK2Q01484 3957 aa5.47□□□□□ -1.53
PNKP-231ENST00000640501 DNAH3Q8TD57 4116 aa5.47□□□□□ -1.53
PNKP-231ENST00000640501 PDE6GP18545 87 aa5.47□□□□□ -1.53
PNKP-231ENST00000640501 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.47□□□□□ -1.53
PNKP-231ENST00000640501 Q6ZRP5 223 aa5.47□□□□□ -1.53
PNKP-231ENST00000640501 CDIP1Q9H305 208 aa5.47□□□□□ -1.53
PNKP-231ENST00000640501 ELOF1P60002 83 aaKnown RBP5.46□□□□□ -1.54
PNKP-231ENST00000640501 GAGE2AQ6NT46 116 aa5.46□□□□□ -1.54
PNKP-231ENST00000640501 IGLV5-37A0A075B6J1 123 aa5.45□□□□□ -1.54
PNKP-231ENST00000640501 PRYO14603 147 aa5.45□□□□□ -1.54
PNKP-231ENST00000640501 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
PNKP-231ENST00000640501 OBSCN-AS1Q96MR7 158 aa5.45□□□□□ -1.54
PNKP-231ENST00000640501 CMYA5Q8N3K9 4069 aa5.44□□□□□ -1.54
PNKP-231ENST00000640501 XGP55808 180 aa5.44□□□□□ -1.54
PNKP-231ENST00000640501 GAGE2BQ13066 116 aa5.44□□□□□ -1.54
PNKP-231ENST00000640501 Q6Q795 121 aa5.44□□□□□ -1.54
PNKP-231ENST00000640501 LINC00643Q86TS7 51 aa5.44□□□□□ -1.54
PNKP-231ENST00000640501 Q8NDZ9 215 aa5.44□□□□□ -1.54
PNKP-231ENST00000640501 DHRS4-AS1Q9P1J3 65 aa5.44□□□□□ -1.54
PNKP-231ENST00000640501 LAMTOR3Q9UHA4 124 aa5.44□□□□□ -1.54
PNKP-231ENST00000640501 NBDYA0A0U1RRE5 68 aa5.43□□□□□ -1.54
PNKP-231ENST00000640501 SLPIP03973 132 aa5.43□□□□□ -1.54
PNKP-231ENST00000640501 RBM3P98179 157 aaKnown RBP5.43□□□□□ -1.54
PNKP-231ENST00000640501 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
PNKP-231ENST00000640501 DSCR8Q96T75 97 aa5.43□□□□□ -1.54
PNKP-231ENST00000640501 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
PNKP-231ENST00000640501 KCNQ1DNQ9H478 68 aa5.43□□□□□ -1.54
PNKP-231ENST00000640501 C14orf132Q9NPU4 83 aa5.43□□□□□ -1.54
PNKP-231ENST00000640501 ETDCA0A1B0GVM5 59 aa5.42□□□□□ -1.54
PNKP-231ENST00000640501 CCKP06307 115 aa5.42□□□□□ -1.54
PNKP-231ENST00000640501 KRTAP21-3Q3LHN1 58 aa5.42□□□□□ -1.54
PNKP-231ENST00000640501 Q6ZQY7 126 aa5.42□□□□□ -1.54
PNKP-231ENST00000640501 LINC00474Q9P2X8 69 aa5.42□□□□□ -1.54
PNKP-231ENST00000640501 C16orf90A8MZG2 172 aa5.41□□□□□ -1.54
PNKP-231ENST00000640501 MT-ATP8P03928 68 aa5.41□□□□□ -1.54
PNKP-231ENST00000640501 MRPL55Q7Z7F7 128 aaKnown RBP5.41□□□□□ -1.54
PNKP-231ENST00000640501 LINC00528Q8N1L1 170 aa5.41□□□□□ -1.54
PNKP-231ENST00000640501 C7orf33Q8WU49 177 aa5.41□□□□□ -1.54
PNKP-231ENST00000640501 A0A1B0GV72 72 aa5.4□□□□□ -1.54
PNKP-231ENST00000640501 C22orf24Q9Y442 160 aa5.4□□□□□ -1.54
PNKP-231ENST00000640501 IGLV1-50A0A075B6I6 118 aa5.39□□□□□ -1.55
PNKP-231ENST00000640501 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
PNKP-231ENST00000640501 TRBV7-7A0A0K0K1E9 115 aa5.39□□□□□ -1.55
PNKP-231ENST00000640501 CASC10Q5T4H9 136 aa5.39□□□□□ -1.55
PNKP-231ENST00000640501 SERTAD4-AS1Q5TG53 156 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms