RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 LINC00526Q96FQ7 95 aa10.13□□□□□ -0.79
TRIM3-215ENST00000639856 TMEM126AQ9H061 195 aa10.11□□□□□ -0.79
TRIM3-215ENST00000639856 LECT2O14960 151 aa10.1□□□□□ -0.79
TRIM3-215ENST00000639856 DNAH9Q9NYC9 4486 aa10.09□□□□□ -0.79
TRIM3-215ENST00000639856 GVQW2A0A096LPI5 108 aaPredicted RBP10.09□□□□□ -0.79
TRIM3-215ENST00000639856 Q8NDZ9 215 aa10.09□□□□□ -0.79
TRIM3-215ENST00000639856 B9D2Q9BPU9 175 aa10.09□□□□□ -0.79
TRIM3-215ENST00000639856 SNCGO76070 127 aa10.09□□□□□ -0.79
TRIM3-215ENST00000639856 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
TRIM3-215ENST00000639856 NCR3O14931 201 aa10.07□□□□□ -0.8
TRIM3-215ENST00000639856 ACYP1P07311 99 aa10.07□□□□□ -0.8
TRIM3-215ENST00000639856 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
TRIM3-215ENST00000639856 INAFM2P0DMQ5 153 aa10.06□□□□□ -0.8
TRIM3-215ENST00000639856 C6orf48Q9UBA6 75 aa10.06□□□□□ -0.8
TRIM3-215ENST00000639856 LINC00588Q9Y4M8 146 aa10.06□□□□□ -0.8
TRIM3-215ENST00000639856 MEGF8Q7Z7M0 2845 aa10.05□□□□□ -0.8
TRIM3-215ENST00000639856 A0A1B0GX51 115 aa10.05□□□□□ -0.8
TRIM3-215ENST00000639856 LINC01556Q5JQF7 62 aa10.05□□□□□ -0.8
TRIM3-215ENST00000639856 DNHD1Q96M86 4753 aa10.05□□□□□ -0.8
TRIM3-215ENST00000639856 S100A7L2Q5SY68 101 aa10.04□□□□□ -0.8
TRIM3-215ENST00000639856 ZNF561-AS1K7EIQ3 104 aa10.04□□□□□ -0.8
TRIM3-215ENST00000639856 SLPIP03973 132 aa10.03□□□□□ -0.8
TRIM3-215ENST00000639856 GAGE2BQ13066 116 aa10.03□□□□□ -0.8
TRIM3-215ENST00000639856 GAGE2EQ4V326 116 aa10.03□□□□□ -0.8
TRIM3-215ENST00000639856 HIGD2BQ4VC39 106 aa10.03□□□□□ -0.8
TRIM3-215ENST00000639856 LINC00167Q96N53 147 aa10.03□□□□□ -0.8
TRIM3-215ENST00000639856 ORMDL1Q9P0S3 153 aa10.03□□□□□ -0.8
TRIM3-215ENST00000639856 GAGE2DQ9UEU5 116 aa10.03□□□□□ -0.8
TRIM3-215ENST00000639856 C6orf99Q4VX62 202 aa10.02□□□□□ -0.81
TRIM3-215ENST00000639856 TTC32Q5I0X7 151 aa10.02□□□□□ -0.81
TRIM3-215ENST00000639856 Q8N814 137 aa10.02□□□□□ -0.81
TRIM3-215ENST00000639856 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
TRIM3-215ENST00000639856 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
TRIM3-215ENST00000639856 C9orf129Q5T035 196 aaKnown RBP10.01□□□□□ -0.81
TRIM3-215ENST00000639856 Q6Q795 121 aa10.01□□□□□ -0.81
TRIM3-215ENST00000639856 C15orf56Q8N910 161 aa10.01□□□□□ -0.81
TRIM3-215ENST00000639856 OBSCN-AS1Q96MR7 158 aa10.01□□□□□ -0.81
TRIM3-215ENST00000639856 C1orf43Q9BWL3 253 aa10.01□□□□□ -0.81
TRIM3-215ENST00000639856 SS18L2Q9UHA2 77 aa10.01□□□□□ -0.81
TRIM3-215ENST00000639856 PRKDCP78527 4128 aaKnown RBP10□□□□□ -0.81
TRIM3-215ENST00000639856 IGLV6-57P01721 117 aa10□□□□□ -0.81
TRIM3-215ENST00000639856 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
TRIM3-215ENST00000639856 C2orf48Q96LS8 159 aa9.99□□□□□ -0.81
TRIM3-215ENST00000639856 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
TRIM3-215ENST00000639856 ANAPC13Q9BS18 74 aa9.98□□□□□ -0.81
TRIM3-215ENST00000639856 IGKV2D-24A0A075B6R9 120 aa9.98□□□□□ -0.81
TRIM3-215ENST00000639856 NHLRC4P0CG21 123 aaPredicted RBP9.98□□□□□ -0.81
TRIM3-215ENST00000639856 GAGE2AQ6NT46 116 aa9.98□□□□□ -0.81
TRIM3-215ENST00000639856 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
TRIM3-215ENST00000639856 Q6ZRU5 148 aa9.98□□□□□ -0.81
TRIM3-215ENST00000639856 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
TRIM3-215ENST00000639856 LINC00575Q6W349 94 aa9.97□□□□□ -0.81
TRIM3-215ENST00000639856 SMCR5Q8TEV8 140 aa9.97□□□□□ -0.81
TRIM3-215ENST00000639856 TENM2Q9NT68 2774 aa9.97□□□□□ -0.81
TRIM3-215ENST00000639856 CSMD3Q7Z407 3707 aa9.96□□□□□ -0.81
TRIM3-215ENST00000639856 TMEM256-PLSCR3K7ERE1 68 aa9.95□□□□□ -0.82
TRIM3-215ENST00000639856 F8WDY8 70 aa9.95□□□□□ -0.82
TRIM3-215ENST00000639856 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
TRIM3-215ENST00000639856 LYSTQ99698 3801 aa9.95□□□□□ -0.82
TRIM3-215ENST00000639856 TRBV7-7A0A0K0K1E9 115 aa9.94□□□□□ -0.82
TRIM3-215ENST00000639856 TRBV10-3A0A0K0K1G6 114 aa9.94□□□□□ -0.82
TRIM3-215ENST00000639856 NDUFC2-KCTD14E9PQ53 114 aa9.94□□□□□ -0.82
TRIM3-215ENST00000639856 B5MCH6 92 aa9.94□□□□□ -0.82
TRIM3-215ENST00000639856 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
TRIM3-215ENST00000639856 VPREB1P12018 145 aa9.93□□□□□ -0.82
TRIM3-215ENST00000639856 APLNQ9ULZ1 77 aa9.93□□□□□ -0.82
TRIM3-215ENST00000639856 TRAV23DV6A0A075B6W5 121 aa9.92□□□□□ -0.82
TRIM3-215ENST00000639856 hADV29S1A0JD25 119 aa9.92□□□□□ -0.82
TRIM3-215ENST00000639856 JMJD7-PLA2G4BH0Y9G9 81 aa9.92□□□□□ -0.82
TRIM3-215ENST00000639856 NDUFV3P56181 108 aaKnown RBP9.92□□□□□ -0.82
TRIM3-215ENST00000639856 IMUPQ9GZP8 106 aa9.91□□□□□ -0.82
TRIM3-215ENST00000639856 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
TRIM3-215ENST00000639856 DIRC1Q969H9 104 aa9.91□□□□□ -0.82
TRIM3-215ENST00000639856 CASC10Q5T4H9 136 aa9.9□□□□□ -0.82
TRIM3-215ENST00000639856 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
TRIM3-215ENST00000639856 Q6ZRP5 223 aa9.89□□□□□ -0.83
TRIM3-215ENST00000639856 M0R378 163 aa9.89□□□□□ -0.83
TRIM3-215ENST00000639856 ZNF73O43830 326 aaPredicted RBP9.88□□□□□ -0.83
TRIM3-215ENST00000639856 KRTAP1-5Q9BYS1 174 aa9.88□□□□□ -0.83
TRIM3-215ENST00000639856 CCKP06307 115 aa9.88□□□□□ -0.83
TRIM3-215ENST00000639856 DYNC2H1Q8NCM8 4307 aaKnown RBP9.87□□□□□ -0.83
TRIM3-215ENST00000639856 UBE2DNLQ8IWF7 75 aa9.87□□□□□ -0.83
TRIM3-215ENST00000639856 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
TRIM3-215ENST00000639856 FBN3Q75N90 2809 aa9.86□□□□□ -0.83
TRIM3-215ENST00000639856 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
TRIM3-215ENST00000639856 TRBV7-6A0A0J9YX20 115 aa9.86□□□□□ -0.83
TRIM3-215ENST00000639856 KRTAP21-3Q3LHN1 58 aa9.86□□□□□ -0.83
TRIM3-215ENST00000639856 NUPR2A6NF83 97 aa9.85□□□□□ -0.83
TRIM3-215ENST00000639856 ELOF1P60002 83 aaKnown RBP9.85□□□□□ -0.83
TRIM3-215ENST00000639856 COX7BP24311 80 aa9.85□□□□□ -0.83
TRIM3-215ENST00000639856 Q6ZQY7 126 aa9.85□□□□□ -0.83
TRIM3-215ENST00000639856 DNAH7Q8WXX0 4024 aa9.84□□□□□ -0.83
TRIM3-215ENST00000639856 H3BQ85 93 aa9.83□□□□□ -0.84
TRIM3-215ENST00000639856 USP17L23D6RBM5 183 aa9.83□□□□□ -0.84
TRIM3-215ENST00000639856 RMI2Q96E14 147 aa9.83□□□□□ -0.84
TRIM3-215ENST00000639856 TLX1NBP0CAT3 122 aa9.82□□□□□ -0.84
TRIM3-215ENST00000639856 RBM3P98179 157 aaKnown RBP9.81□□□□□ -0.84
TRIM3-215ENST00000639856 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.81□□□□□ -0.84
TRIM3-215ENST00000639856 LAMTOR3Q9UHA4 124 aa9.81□□□□□ -0.84
TRIM3-215ENST00000639856 PLECQ15149 4684 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms