RNA–Protein interactions for RNA: ENST00000638965.1

PAX6-247, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-247ENST00000638965 TMEM136Q6ZRR5 245 aa6.72□□□□□ -1.33
PAX6-247ENST00000638965 VCX2Q9H322 139 aa6.71□□□□□ -1.34
PAX6-247ENST00000638965 NAT8Q9UHE5 227 aa6.71□□□□□ -1.34
PAX6-247ENST00000638965 PAM16Q9Y3D7 125 aa6.71□□□□□ -1.34
PAX6-247ENST00000638965 IGKV2-28A0A075B6P5 120 aa6.7□□□□□ -1.34
PAX6-247ENST00000638965 IGKV2D-28P01615 120 aa6.7□□□□□ -1.34
PAX6-247ENST00000638965 KRTAP19-2Q3LHN2 52 aa6.7□□□□□ -1.34
PAX6-247ENST00000638965 PLEKHB2Q96CS7 222 aa6.7□□□□□ -1.34
PAX6-247ENST00000638965 LAMTOR2Q9Y2Q5 125 aa6.7□□□□□ -1.34
PAX6-247ENST00000638965 LOC389332A0A1B0GUA5 103 aa6.69□□□□□ -1.34
PAX6-247ENST00000638965 ATP5L2Q7Z4Y8 100 aa6.69□□□□□ -1.34
PAX6-247ENST00000638965 Q8N8P6 123 aa6.69□□□□□ -1.34
PAX6-247ENST00000638965 IGLV5-45A0A087WSX0 123 aa6.68□□□□□ -1.34
PAX6-247ENST00000638965 TMEM238C9JI98 176 aa6.68□□□□□ -1.34
PAX6-247ENST00000638965 SEC11AP67812 179 aa6.68□□□□□ -1.34
PAX6-247ENST00000638965 NKAPP1Q8N9T2 125 aa6.68□□□□□ -1.34
PAX6-247ENST00000638965 TMEM126AQ9H061 195 aa6.68□□□□□ -1.34
PAX6-247ENST00000638965 MAP1LC3AQ9H492 121 aa6.68□□□□□ -1.34
PAX6-247ENST00000638965 M0R378 163 aa6.67□□□□□ -1.34
PAX6-247ENST00000638965 PDZD11Q5EBL8 140 aa6.67□□□□□ -1.34
PAX6-247ENST00000638965 SPAG11AQ6PDA7 123 aa6.67□□□□□ -1.34
PAX6-247ENST00000638965 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
PAX6-247ENST00000638965 K7EMI3 77 aa6.66□□□□□ -1.34
PAX6-247ENST00000638965 VPREB1P12018 145 aa6.66□□□□□ -1.34
PAX6-247ENST00000638965 ORMDL2Q53FV1 153 aa6.66□□□□□ -1.34
PAX6-247ENST00000638965 Q8NDZ9 215 aa6.66□□□□□ -1.34
PAX6-247ENST00000638965 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
PAX6-247ENST00000638965 GEMIN7Q9H840 131 aaKnown RBP6.66□□□□□ -1.34
PAX6-247ENST00000638965 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
PAX6-247ENST00000638965 LINC00337Q8N6G1 96 aa6.65□□□□□ -1.34
PAX6-247ENST00000638965 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
PAX6-247ENST00000638965 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
PAX6-247ENST00000638965 RAB5BP61020 215 aa6.64□□□□□ -1.35
PAX6-247ENST00000638965 TOMM6Q96B49 74 aa6.64□□□□□ -1.35
PAX6-247ENST00000638965 SPRR4Q96PI1 79 aa6.64□□□□□ -1.35
PAX6-247ENST00000638965 MT1HP80294 61 aa6.63□□□□□ -1.35
PAX6-247ENST00000638965 PAPPA-AS1Q5QFB9 102 aa6.63□□□□□ -1.35
PAX6-247ENST00000638965 SMIM29Q86T20 159 aa6.63□□□□□ -1.35
PAX6-247ENST00000638965 SPINK8P0C7L1 97 aa6.62□□□□□ -1.35
PAX6-247ENST00000638965 CBLN2Q8IUK8 224 aa6.62□□□□□ -1.35
PAX6-247ENST00000638965 GNB1LQ9BYB4 327 aa6.62□□□□□ -1.35
PAX6-247ENST00000638965 SND1-IT1Q9HBX3 110 aa6.62□□□□□ -1.35
PAX6-247ENST00000638965 ADCYAP1P18509 176 aa6.61□□□□□ -1.35
PAX6-247ENST00000638965 ERASQ7Z444 233 aa6.61□□□□□ -1.35
PAX6-247ENST00000638965 AKAP14Q86UN6 197 aa6.61□□□□□ -1.35
PAX6-247ENST00000638965 Q8NBF4 154 aa6.61□□□□□ -1.35
PAX6-247ENST00000638965 NXT2Q9NPJ8 142 aaKnown RBP6.61□□□□□ -1.35
PAX6-247ENST00000638965 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
PAX6-247ENST00000638965 DAND5Q8N907 189 aa6.6□□□□□ -1.35
PAX6-247ENST00000638965 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
PAX6-247ENST00000638965 ATP5LO75964 103 aa6.58□□□□□ -1.36
PAX6-247ENST00000638965 SPINK1P00995 79 aa6.58□□□□□ -1.36
PAX6-247ENST00000638965 PFN2P35080 140 aa6.58□□□□□ -1.36
PAX6-247ENST00000638965 Q8N377 158 aa6.58□□□□□ -1.36
PAX6-247ENST00000638965 CST9LQ9H4G1 147 aa6.58□□□□□ -1.36
PAX6-247ENST00000638965 G0S2P27469 103 aa6.57□□□□□ -1.36
PAX6-247ENST00000638965 PEA15Q15121 130 aa6.57□□□□□ -1.36
PAX6-247ENST00000638965 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
PAX6-247ENST00000638965 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
PAX6-247ENST00000638965 RPS29P62273 56 aaKnown RBP6.56□□□□□ -1.36
PAX6-247ENST00000638965 LINC00483Q53H64 154 aa6.56□□□□□ -1.36
PAX6-247ENST00000638965 ERG28Q9UKR5 140 aa6.56□□□□□ -1.36
PAX6-247ENST00000638965 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
PAX6-247ENST00000638965 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
PAX6-247ENST00000638965 COX17Q14061 63 aa6.55□□□□□ -1.36
PAX6-247ENST00000638965 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
PAX6-247ENST00000638965 KRTAP4-16G5E9R7 235 aaPredicted RBP6.54□□□□□ -1.36
PAX6-247ENST00000638965 SPRR1AP35321 89 aa6.54□□□□□ -1.36
PAX6-247ENST00000638965 RAB14P61106 215 aa6.54□□□□□ -1.36
PAX6-247ENST00000638965 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
PAX6-247ENST00000638965 PMVKQ15126 192 aa6.53□□□□□ -1.36
PAX6-247ENST00000638965 H3BRM9 83 aa6.52□□□□□ -1.37
PAX6-247ENST00000638965 ZNF22P17026 224 aaPredicted RBP6.52□□□□□ -1.37
PAX6-247ENST00000638965 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
PAX6-247ENST00000638965 SMCR5Q8TEV8 140 aa6.51□□□□□ -1.37
PAX6-247ENST00000638965 ZNF625Q96I27 306 aaPredicted RBP6.51□□□□□ -1.37
PAX6-247ENST00000638965 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
PAX6-247ENST00000638965 A0A1B0GVG6 124 aa6.5□□□□□ -1.37
PAX6-247ENST00000638965 LINC01549A6NIU2 74 aa6.5□□□□□ -1.37
PAX6-247ENST00000638965 KIAA1644Q3SXP7 199 aa6.5□□□□□ -1.37
PAX6-247ENST00000638965 MOBPQ13875 183 aa6.49□□□□□ -1.37
PAX6-247ENST00000638965 KCNQ1DNQ9H478 68 aa6.49□□□□□ -1.37
PAX6-247ENST00000638965 A0A096LNJ9 63 aa6.48□□□□□ -1.37
PAX6-247ENST00000638965 SLC25A20O43772 301 aa6.48□□□□□ -1.37
PAX6-247ENST00000638965 MT-ND4LP03901 98 aa6.48□□□□□ -1.37
PAX6-247ENST00000638965 ERC2-IT1O76042 136 aa6.46□□□□□ -1.38
PAX6-247ENST00000638965 PCOTHQ58A44 107 aa6.46□□□□□ -1.38
PAX6-247ENST00000638965 SFTA2Q6UW10 78 aa6.46□□□□□ -1.38
PAX6-247ENST00000638965 SSBP3-AS1Q7Z2R9 100 aa6.46□□□□□ -1.38
PAX6-247ENST00000638965 IGLV9-49A0A0B4J1Y8 123 aa6.45□□□□□ -1.38
PAX6-247ENST00000638965 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
PAX6-247ENST00000638965 GAGE2AQ6NT46 116 aa6.45□□□□□ -1.38
PAX6-247ENST00000638965 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
PAX6-247ENST00000638965 TRBV10-3A0A0K0K1G6 114 aa6.43□□□□□ -1.38
PAX6-247ENST00000638965 Q9BRP9 147 aa6.43□□□□□ -1.38
PAX6-247ENST00000638965 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
PAX6-247ENST00000638965 NCR3O14931 201 aa6.42□□□□□ -1.38
PAX6-247ENST00000638965 CFC1P0CG37 223 aa6.42□□□□□ -1.38
PAX6-247ENST00000638965 LINC00158P58513 81 aa6.42□□□□□ -1.38
PAX6-247ENST00000638965 BOD1L2Q8IYS8 172 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms