RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 PHF5AQ7RTV0 110 aaKnown RBP12.15□□□□□ -0.46
HLA-A-209ENST00000638375 Q8NDZ9 215 aa12.15□□□□□ -0.46
HLA-A-209ENST00000638375 PLA2G2DQ9UNK4 145 aa12.15□□□□□ -0.46
HLA-A-209ENST00000638375 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.46
HLA-A-209ENST00000638375 M0QXV9 152 aa12.14□□□□□ -0.47
HLA-A-209ENST00000638375 TIMM17BO60830 172 aa12.14□□□□□ -0.47
HLA-A-209ENST00000638375 Q8N1X5 172 aa12.14□□□□□ -0.47
HLA-A-209ENST00000638375 VAMP8Q9BV40 100 aa12.14□□□□□ -0.47
HLA-A-209ENST00000638375 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
HLA-A-209ENST00000638375 TP73-AS1Q9UF72 201 aa12.13□□□□□ -0.47
HLA-A-209ENST00000638375 VPREB1P12018 145 aa12.12□□□□□ -0.47
HLA-A-209ENST00000638375 SCGB1D4Q6XE38 83 aa12.12□□□□□ -0.47
HLA-A-209ENST00000638375 C22orf24Q9Y442 160 aa12.12□□□□□ -0.47
HLA-A-209ENST00000638375 IGLV5-37A0A075B6J1 123 aa12.11□□□□□ -0.47
HLA-A-209ENST00000638375 LOC107984156A0A0G2JMH3 177 aa12.1□□□□□ -0.47
HLA-A-209ENST00000638375 EIF4EBP3O60516 100 aaPredicted RBP12.1□□□□□ -0.47
HLA-A-209ENST00000638375 COX8AP10176 69 aa12.1□□□□□ -0.47
HLA-A-209ENST00000638375 SOSTDC1Q6X4U4 206 aa12.1□□□□□ -0.47
HLA-A-209ENST00000638375 ARL17AQ8IVW1 177 aa12.1□□□□□ -0.47
HLA-A-209ENST00000638375 NPC2P61916 151 aa12.09□□□□□ -0.47
HLA-A-209ENST00000638375 Q5VSD8 79 aa12.09□□□□□ -0.47
HLA-A-209ENST00000638375 BOD1L2Q8IYS8 172 aa12.09□□□□□ -0.47
HLA-A-209ENST00000638375 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
HLA-A-209ENST00000638375 KRTAP11-1Q8IUC1 163 aa12.08□□□□□ -0.48
HLA-A-209ENST00000638375 LOC105371267A0A1B0GV96 52 aa12.07□□□□□ -0.48
HLA-A-209ENST00000638375 TMEM238C9JI98 176 aa12.07□□□□□ -0.48
HLA-A-209ENST00000638375 FAM229AH3BQW9 127 aa12.07□□□□□ -0.48
HLA-A-209ENST00000638375 RPL24P83731 157 aaKnown RBP12.07□□□□□ -0.48
HLA-A-209ENST00000638375 MRPL55Q7Z7F7 128 aaKnown RBP12.07□□□□□ -0.48
HLA-A-209ENST00000638375 NKAPP1Q8N9T2 125 aa12.07□□□□□ -0.48
HLA-A-209ENST00000638375 C14orf144Q96I85 54 aa12.07□□□□□ -0.48
HLA-A-209ENST00000638375 VPS13BQ7Z7G8 4022 aa12.07□□□□□ -0.48
HLA-A-209ENST00000638375 LINC00308Q8TCZ7 52 aa12.06□□□□□ -0.48
HLA-A-209ENST00000638375 SPANXDQ9BXN6 97 aa12.06□□□□□ -0.48
HLA-A-209ENST00000638375 SPANXCQ9NY87 97 aa12.06□□□□□ -0.48
HLA-A-209ENST00000638375 DLEU1O43261 78 aa12.05□□□□□ -0.48
HLA-A-209ENST00000638375 KRTAP10-4P60372 401 aaPredicted RBP12.05□□□□□ -0.48
HLA-A-209ENST00000638375 RPL37AP61513 92 aaKnown RBP12.05□□□□□ -0.48
HLA-A-209ENST00000638375 LINC00167Q96N53 147 aa12.05□□□□□ -0.48
HLA-A-209ENST00000638375 MIEN1Q9BRT3 115 aa12.05□□□□□ -0.48
HLA-A-209ENST00000638375 KRTAP4-5Q9BYR2 181 aa12.05□□□□□ -0.48
HLA-A-209ENST00000638375 GAGE10A6NGK3 116 aa12.04□□□□□ -0.48
HLA-A-209ENST00000638375 PRR3P79522 188 aaKnown RBP12.04□□□□□ -0.48
HLA-A-209ENST00000638375 LBHQ53QV2 105 aaPredicted RBP12.04□□□□□ -0.48
HLA-A-209ENST00000638375 UBE2BP63146 152 aa12.03□□□□□ -0.48
HLA-A-209ENST00000638375 NCR3O14931 201 aa12.02□□□□□ -0.49
HLA-A-209ENST00000638375 PSORS1C2Q9UIG4 136 aa12.02□□□□□ -0.49
HLA-A-209ENST00000638375 RPL37AP8A6NKH3 93 aa12.01□□□□□ -0.49
HLA-A-209ENST00000638375 PLA2G1BP04054 148 aaKnown RBP12.01□□□□□ -0.49
HLA-A-209ENST00000638375 SLC25A34Q6PIV7 304 aa12.01□□□□□ -0.49
HLA-A-209ENST00000638375 SPANXB1Q9NS25 103 aaPredicted RBP12.01□□□□□ -0.49
HLA-A-209ENST00000638375 NDUFC2O95298 119 aa12□□□□□ -0.49
HLA-A-209ENST00000638375 Q6ZVH6 145 aa12□□□□□ -0.49
HLA-A-209ENST00000638375 M0R378 163 aa11.99□□□□□ -0.49
HLA-A-209ENST00000638375 SMIM6P0DI80 62 aa11.99□□□□□ -0.49
HLA-A-209ENST00000638375 IFITM1P13164 125 aa11.99□□□□□ -0.49
HLA-A-209ENST00000638375 S100A12P80511 92 aa11.99□□□□□ -0.49
HLA-A-209ENST00000638375 MUSTN1Q8IVN3 82 aa11.98□□□□□ -0.49
HLA-A-209ENST00000638375 IGLV1-50A0A075B6I6 118 aa11.97□□□□□ -0.49
HLA-A-209ENST00000638375 IGKV2-28A0A075B6P5 120 aa11.97□□□□□ -0.49
HLA-A-209ENST00000638375 IGKV2D-28P01615 120 aa11.97□□□□□ -0.49
HLA-A-209ENST00000638375 C2orf91Q6ZV80 131 aa11.97□□□□□ -0.49
HLA-A-209ENST00000638375 PPDPFQ9H3Y8 114 aa11.97□□□□□ -0.49
HLA-A-209ENST00000638375 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.49
HLA-A-209ENST00000638375 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.49
HLA-A-209ENST00000638375 C1orf137Q5JT78 98 aa11.96□□□□□ -0.49
HLA-A-209ENST00000638375 HIGD1BQ9P298 99 aa11.95□□□□□ -0.5
HLA-A-209ENST00000638375 HNRNPA3P51991 378 aaKnown RBP11.94□□□□□ -0.5
HLA-A-209ENST00000638375 COPS9Q8WXC6 57 aa11.94□□□□□ -0.5
HLA-A-209ENST00000638375 ABCA13Q86UQ4 5058 aa11.94□□□□□ -0.5
HLA-A-209ENST00000638375 TRBV10-3A0A0K0K1G6 114 aa11.93□□□□□ -0.5
HLA-A-209ENST00000638375 PKHD1L1Q86WI1 4243 aa11.92□□□□□ -0.5
HLA-A-209ENST00000638375 HIST1H4GQ99525 98 aa11.91□□□□□ -0.5
HLA-A-209ENST00000638375 DDTP30046 118 aa11.9□□□□□ -0.5
HLA-A-209ENST00000638375 IGLV6-57P01721 117 aa11.89□□□□□ -0.51
HLA-A-209ENST00000638375 IGLV7-43P04211 117 aa11.89□□□□□ -0.51
HLA-A-209ENST00000638375 LINC00337Q8N6G1 96 aa11.89□□□□□ -0.51
HLA-A-209ENST00000638375 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
HLA-A-209ENST00000638375 UQCR10Q9UDW1 63 aa11.89□□□□□ -0.51
HLA-A-209ENST00000638375 BCE1O60756 84 aa11.88□□□□□ -0.51
HLA-A-209ENST00000638375 S100A7L2Q5SY68 101 aa11.88□□□□□ -0.51
HLA-A-209ENST00000638375 REG3GQ6UW15 175 aa11.88□□□□□ -0.51
HLA-A-209ENST00000638375 LINC00518Q8N0U6 118 aa11.88□□□□□ -0.51
HLA-A-209ENST00000638375 KCNQ1DNQ9H478 68 aa11.88□□□□□ -0.51
HLA-A-209ENST00000638375 SRRM2Q9UQ35 2752 aaKnown RBP11.87□□□□□ -0.51
HLA-A-209ENST00000638375 A4D1N5 150 aa11.87□□□□□ -0.51
HLA-A-209ENST00000638375 PRYO14603 147 aa11.87□□□□□ -0.51
HLA-A-209ENST00000638375 PRO1933Q9H354 126 aa11.87□□□□□ -0.51
HLA-A-209ENST00000638375 INAFM2P0DMQ5 153 aa11.85□□□□□ -0.51
HLA-A-209ENST00000638375 C12orf57Q99622 126 aa11.85□□□□□ -0.51
HLA-A-209ENST00000638375 SPRR1AP35321 89 aa11.84□□□□□ -0.51
HLA-A-209ENST00000638375 TAL2Q16559 108 aa11.84□□□□□ -0.51
HLA-A-209ENST00000638375 OR13C6PQ8NH95 151 aa11.84□□□□□ -0.51
HLA-A-209ENST00000638375 TRAV23DV6A0A075B6W5 121 aa11.82□□□□□ -0.52
HLA-A-209ENST00000638375 KRTAP13-1Q8IUC0 172 aa11.82□□□□□ -0.52
HLA-A-209ENST00000638375 KRTAP4-16G5E9R7 235 aaPredicted RBP11.81□□□□□ -0.52
HLA-A-209ENST00000638375 ZNF861PO60384 105 aa11.81□□□□□ -0.52
HLA-A-209ENST00000638375 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
HLA-A-209ENST00000638375 FAM19A1Q7Z5A9 133 aa11.81□□□□□ -0.52
HLA-A-209ENST00000638375 CEND1Q8N111 149 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms