RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 CHTF8P0CG12 524 aa6.26□□□□□ -1.41
SOX2-OT-249ENST00000628810 TTTY13Q9BZ97 58 aa6.26□□□□□ -1.41
SOX2-OT-249ENST00000628810 TIMM17BO60830 172 aa6.25□□□□□ -1.41
SOX2-OT-249ENST00000628810 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
SOX2-OT-249ENST00000628810 PCP2Q8IVA1 136 aa6.25□□□□□ -1.41
SOX2-OT-249ENST00000628810 VAMP8Q9BV40 100 aa6.25□□□□□ -1.41
SOX2-OT-249ENST00000628810 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
SOX2-OT-249ENST00000628810 IGKV2-24A0A0C4DH68 120 aa6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 SMIM6P0DI80 62 aa6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 SMIM13P0DJ93 91 aa6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 PFN2P35080 140 aa6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 GAGE2BQ13066 116 aa6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 MEIG1Q5JSS6 88 aa6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 C9orf129Q5T035 196 aaKnown RBP6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 LITAFQ99732 161 aa6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
SOX2-OT-249ENST00000628810 DLEU1O43261 78 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 COX8AP10176 69 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 XGP55808 180 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 GAGE2EQ4V326 116 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 SPATA45Q537H7 98 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 SCXQ7RTU7 201 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 BOD1L2Q8IYS8 172 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 GAGE2DQ9UEU5 116 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
SOX2-OT-249ENST00000628810 A0A087WYN8 130 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 LOC107984156A0A0G2JMH3 177 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 LINC00158P58513 81 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 ARL17AQ8IVW1 177 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 MIR7-3HGQ8N6C7 128 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 CIRBP-AS1Q8TBR5 109 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 SND1-IT1Q9HBX3 110 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 XAGE1AQ9HD64 81 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 PLA2G2DQ9UNK4 145 aa6.22□□□□□ -1.41
SOX2-OT-249ENST00000628810 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.42
SOX2-OT-249ENST00000628810 SPANXDQ9BXN6 97 aa6.21□□□□□ -1.42
SOX2-OT-249ENST00000628810 SPANXCQ9NY87 97 aa6.21□□□□□ -1.42
SOX2-OT-249ENST00000628810 IGLV5-37A0A075B6J1 123 aa6.2□□□□□ -1.42
SOX2-OT-249ENST00000628810 A0A0U1RRA0 63 aa6.2□□□□□ -1.42
SOX2-OT-249ENST00000628810 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
SOX2-OT-249ENST00000628810 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
SOX2-OT-249ENST00000628810 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
SOX2-OT-249ENST00000628810 SCGB1D4Q6XE38 83 aa6.2□□□□□ -1.42
SOX2-OT-249ENST00000628810 PPDPFQ9H3Y8 114 aa6.2□□□□□ -1.42
SOX2-OT-249ENST00000628810 RYR1P21817 5038 aa6.19□□□□□ -1.42
SOX2-OT-249ENST00000628810 FAM168BA1KXE4 195 aa6.19□□□□□ -1.42
SOX2-OT-249ENST00000628810 S100A12P80511 92 aa6.19□□□□□ -1.42
SOX2-OT-249ENST00000628810 SERTAD4-AS1Q5TG53 156 aa6.19□□□□□ -1.42
SOX2-OT-249ENST00000628810 Q6ZVH6 145 aa6.19□□□□□ -1.42
SOX2-OT-249ENST00000628810 DAND5Q8N907 189 aa6.19□□□□□ -1.42
SOX2-OT-249ENST00000628810 TP73-AS1Q9UF72 201 aa6.19□□□□□ -1.42
SOX2-OT-249ENST00000628810 HSPG2P98160 4391 aa6.18□□□□□ -1.42
SOX2-OT-249ENST00000628810 VPREB1P12018 145 aa6.18□□□□□ -1.42
SOX2-OT-249ENST00000628810 HAMPP81172 84 aa6.18□□□□□ -1.42
SOX2-OT-249ENST00000628810 SLC25A34Q6PIV7 304 aa6.18□□□□□ -1.42
SOX2-OT-249ENST00000628810 FAM19A5Q7Z5A7 132 aaPredicted RBP6.18□□□□□ -1.42
SOX2-OT-249ENST00000628810 C14orf144Q96I85 54 aa6.18□□□□□ -1.42
SOX2-OT-249ENST00000628810 SPANXB1Q9NS25 103 aaPredicted RBP6.18□□□□□ -1.42
SOX2-OT-249ENST00000628810 SOSTDC1Q6X4U4 206 aa6.17□□□□□ -1.42
SOX2-OT-249ENST00000628810 Q8NDZ9 215 aa6.17□□□□□ -1.42
SOX2-OT-249ENST00000628810 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
SOX2-OT-249ENST00000628810 HIGD1BQ9P298 99 aa6.17□□□□□ -1.42
SOX2-OT-249ENST00000628810 KIAA1109Q2LD37 5005 aa6.17□□□□□ -1.42
SOX2-OT-249ENST00000628810 M0QXV9 152 aa6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 NDUFC2O95298 119 aa6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 IFITM1P13164 125 aa6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 RPL24P83731 157 aaKnown RBP6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 COPS9Q8WXC6 57 aa6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 DPH3Q96FX2 82 aa6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 MIEN1Q9BRT3 115 aa6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 C22orf24Q9Y442 160 aa6.16□□□□□ -1.42
SOX2-OT-249ENST00000628810 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-249ENST00000628810 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-249ENST00000628810 NKAPP1Q8N9T2 125 aa6.14□□□□□ -1.43
SOX2-OT-249ENST00000628810 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
SOX2-OT-249ENST00000628810 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
SOX2-OT-249ENST00000628810 NPC2P61916 151 aa6.13□□□□□ -1.43
SOX2-OT-249ENST00000628810 C21orf62-AS1Q17RA5 79 aa6.13□□□□□ -1.43
SOX2-OT-249ENST00000628810 LBHQ53QV2 105 aaPredicted RBP6.13□□□□□ -1.43
SOX2-OT-249ENST00000628810 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
SOX2-OT-249ENST00000628810 C12orf57Q99622 126 aa6.13□□□□□ -1.43
SOX2-OT-249ENST00000628810 M0R378 163 aa6.12□□□□□ -1.43
SOX2-OT-249ENST00000628810 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
SOX2-OT-249ENST00000628810 MUSTN1Q8IVN3 82 aa6.12□□□□□ -1.43
SOX2-OT-249ENST00000628810 LINC00518Q8N0U6 118 aa6.12□□□□□ -1.43
SOX2-OT-249ENST00000628810 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
SOX2-OT-249ENST00000628810 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
SOX2-OT-249ENST00000628810 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
SOX2-OT-249ENST00000628810 SRSF9Q13242 221 aaKnown RBP eCLIP6.11□□□□□ -1.43
SOX2-OT-249ENST00000628810 TAL2Q16559 108 aa6.11□□□□□ -1.43
SOX2-OT-249ENST00000628810 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
SOX2-OT-249ENST00000628810 Q8N1X5 172 aa6.11□□□□□ -1.43
SOX2-OT-249ENST00000628810 HERC2O95714 4834 aa6.11□□□□□ -1.43
SOX2-OT-249ENST00000628810 IGLV1-50A0A075B6I6 118 aa6.1□□□□□ -1.43
SOX2-OT-249ENST00000628810 NCR3O14931 201 aa6.1□□□□□ -1.43
SOX2-OT-249ENST00000628810 SMR3BP02814 79 aaPredicted RBP6.1□□□□□ -1.43
SOX2-OT-249ENST00000628810 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms