RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
SPTAN1-213ENST00000627809 LINC00158P58513 81 aa5.06□□□□□ -1.6
SPTAN1-213ENST00000627809 ANKRD39Q53RE8 183 aa5.06□□□□□ -1.6
SPTAN1-213ENST00000627809 MEIG1Q5JSS6 88 aa5.06□□□□□ -1.6
SPTAN1-213ENST00000627809 ZNF815PA8K554 130 aa5.05□□□□□ -1.6
SPTAN1-213ENST00000627809 SMIM13P0DJ93 91 aa5.05□□□□□ -1.6
SPTAN1-213ENST00000627809 KRTAP7-1Q8IUC3 87 aa5.05□□□□□ -1.6
SPTAN1-213ENST00000627809 PLAC8Q9NZF1 115 aa5.05□□□□□ -1.6
SPTAN1-213ENST00000627809 A0A0J9YXY3 114 aa5.04□□□□□ -1.6
SPTAN1-213ENST00000627809 A0A0U1RRA0 63 aa5.04□□□□□ -1.6
SPTAN1-213ENST00000627809 A0A1W2PNN7 141 aa5.04□□□□□ -1.6
SPTAN1-213ENST00000627809 RPL37AP61513 92 aaKnown RBP5.04□□□□□ -1.6
SPTAN1-213ENST00000627809 C9orf129Q5T035 196 aaKnown RBP5.04□□□□□ -1.6
SPTAN1-213ENST00000627809 XAGE1AQ9HD64 81 aa5.04□□□□□ -1.6
SPTAN1-213ENST00000627809 FAM168BA1KXE4 195 aa5.03□□□□□ -1.6
SPTAN1-213ENST00000627809 TIMM17BO60830 172 aa5.03□□□□□ -1.6
SPTAN1-213ENST00000627809 PYY3Q5JQD4 70 aa5.03□□□□□ -1.6
SPTAN1-213ENST00000627809 VAMP8Q9BV40 100 aa5.03□□□□□ -1.6
SPTAN1-213ENST00000627809 SND1-IT1Q9HBX3 110 aa5.03□□□□□ -1.6
SPTAN1-213ENST00000627809 PLA2G2DQ9UNK4 145 aa5.03□□□□□ -1.6
SPTAN1-213ENST00000627809 KRTAP29-1A8MX34 341 aaPredicted RBP5.02□□□□□ -1.61
SPTAN1-213ENST00000627809 SCGB1D4Q6XE38 83 aa5.02□□□□□ -1.61
SPTAN1-213ENST00000627809 PCP2Q8IVA1 136 aa5.02□□□□□ -1.61
SPTAN1-213ENST00000627809 MIR7-3HGQ8N6C7 128 aa5.02□□□□□ -1.61
SPTAN1-213ENST00000627809 TTTY13Q9BZ97 58 aa5.02□□□□□ -1.61
SPTAN1-213ENST00000627809 J3QL48 77 aa5.01□□□□□ -1.61
SPTAN1-213ENST00000627809 PLA2G1BP04054 148 aaKnown RBP5.01□□□□□ -1.61
SPTAN1-213ENST00000627809 RPL24P83731 157 aaKnown RBP5.01□□□□□ -1.61
SPTAN1-213ENST00000627809 SPATA45Q537H7 98 aa5.01□□□□□ -1.61
SPTAN1-213ENST00000627809 FAM19A5Q7Z5A7 132 aaPredicted RBP5.01□□□□□ -1.61
SPTAN1-213ENST00000627809 C7orf33Q8WU49 177 aa5.01□□□□□ -1.61
SPTAN1-213ENST00000627809 PAM16Q9Y3D7 125 aa5.01□□□□□ -1.61
SPTAN1-213ENST00000627809 LOC107984156A0A0G2JMH3 177 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 TMEM238C9JI98 176 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 M0QXV9 152 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 COX8AP10176 69 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 ADAMTSL4-AS1Q5T5F5 129 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 ARL17AQ8IVW1 177 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 MIEN1Q9BRT3 115 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 TP73-AS1Q9UF72 201 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 C22orf24Q9Y442 160 aa5□□□□□ -1.61
SPTAN1-213ENST00000627809 IGLV5-37A0A075B6J1 123 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 DLEU1O43261 78 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 PRR3P79522 188 aaKnown RBP4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 S100A12P80511 92 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 LBHQ53QV2 105 aaPredicted RBP4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 SERTAD4-AS1Q5TG53 156 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 Q6ZVH6 145 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 PHF5AQ7RTV0 110 aaKnown RBP4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 BOD1L2Q8IYS8 172 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 DAND5Q8N907 189 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 NKAPP1Q8N9T2 125 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 COPS9Q8WXC6 57 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 LITAFQ99732 161 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 SPANXDQ9BXN6 97 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 SPANXCQ9NY87 97 aa4.99□□□□□ -1.61
SPTAN1-213ENST00000627809 VPREB1P12018 145 aa4.98□□□□□ -1.61
SPTAN1-213ENST00000627809 MRPL55Q7Z7F7 128 aaKnown RBP4.98□□□□□ -1.61
SPTAN1-213ENST00000627809 C14orf144Q96I85 54 aa4.98□□□□□ -1.61
SPTAN1-213ENST00000627809 LRP2P98164 4655 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 LPAP08519 4548 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 LOC105371267A0A1B0GV96 52 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 NDUFC2O95298 119 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 IFITM1P13164 125 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 NPC2P61916 151 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 UBE2BP63146 152 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 SRSF9Q13242 221 aaKnown RBP eCLIP4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 SLC25A34Q6PIV7 304 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 LINC00308Q8TCZ7 52 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 PPDPFQ9H3Y8 114 aa4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 SPANXB1Q9NS25 103 aaPredicted RBP4.97□□□□□ -1.61
SPTAN1-213ENST00000627809 M0R378 163 aa4.96□□□□□ -1.62
SPTAN1-213ENST00000627809 SMIM6P0DI80 62 aa4.96□□□□□ -1.62
SPTAN1-213ENST00000627809 SOSTDC1Q6X4U4 206 aa4.96□□□□□ -1.62
SPTAN1-213ENST00000627809 LINC00167Q96N53 147 aa4.96□□□□□ -1.62
SPTAN1-213ENST00000627809 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
SPTAN1-213ENST00000627809 Q8NDZ9 215 aa4.95□□□□□ -1.62
SPTAN1-213ENST00000627809 HIGD1BQ9P298 99 aa4.95□□□□□ -1.62
SPTAN1-213ENST00000627809 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
SPTAN1-213ENST00000627809 GAGE10A6NGK3 116 aa4.94□□□□□ -1.62
SPTAN1-213ENST00000627809 NCR3O14931 201 aa4.94□□□□□ -1.62
SPTAN1-213ENST00000627809 EIF4EBP3O60516 100 aaPredicted RBP4.94□□□□□ -1.62
SPTAN1-213ENST00000627809 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
SPTAN1-213ENST00000627809 LINC00518Q8N0U6 118 aa4.94□□□□□ -1.62
SPTAN1-213ENST00000627809 HIST1H4GQ99525 98 aa4.94□□□□□ -1.62
SPTAN1-213ENST00000627809 PSORS1C2Q9UIG4 136 aa4.94□□□□□ -1.62
SPTAN1-213ENST00000627809 RPL37AP8A6NKH3 93 aa4.93□□□□□ -1.62
SPTAN1-213ENST00000627809 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
SPTAN1-213ENST00000627809 IGKV2-28A0A075B6P5 120 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 IGKV2D-28P01615 120 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 DDTP30046 118 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 TAL2Q16559 108 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 C1orf137Q5JT78 98 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 S100A7L2Q5SY68 101 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 C2orf91Q6ZV80 131 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 UQCR10Q9UDW1 63 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 CBY1Q9Y3M2 126 aa4.92□□□□□ -1.62
SPTAN1-213ENST00000627809 TRBV10-3A0A0K0K1G6 114 aa4.91□□□□□ -1.62
SPTAN1-213ENST00000627809 OXTP01178 125 aa4.91□□□□□ -1.62
SPTAN1-213ENST00000627809 REG3GQ6UW15 175 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms