RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 Q6ZRP5 223 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 Q8IZM0 81 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 ZNF625Q96I27 306 aaPredicted RBP3.66□□□□□ -1.82
LINC00963-215ENST00000622972 CAMK2N2Q96S95 79 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
LINC00963-215ENST00000622972 TOMM7Q9P0U1 55 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 HERC1Q15751 4861 aa3.66□□□□□ -1.82
LINC00963-215ENST00000622972 IGKV2D-26A0A0A0MRZ7 120 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 LOC107984640A0A0U1RRK4 108 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 A0A1W2PNN7 141 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 APOMO95445 188 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 PRR3P79522 188 aaKnown RBP3.65□□□□□ -1.83
LINC00963-215ENST00000622972 C9orf129Q5T035 196 aaKnown RBP3.65□□□□□ -1.83
LINC00963-215ENST00000622972 TMEM170BQ5T4T1 132 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 REG3GQ6UW15 175 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 COX7B2Q8TF08 81 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.83
LINC00963-215ENST00000622972 TTTY13Q9BZ97 58 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 TP73-AS1Q9UF72 201 aa3.65□□□□□ -1.83
LINC00963-215ENST00000622972 NDUFA1O15239 70 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 TLX1NBP0CAT3 122 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 MT1HL1P0DM35 61 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 PCP4P48539 62 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 KRTDAPP60985 99 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 SEC11AP67812 179 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
LINC00963-215ENST00000622972 ATOH7Q8N100 152 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 HSPB8Q9UJY1 196 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 TNXBP22105 4242 aa3.64□□□□□ -1.83
LINC00963-215ENST00000622972 DPM2O94777 84 aa3.63□□□□□ -1.83
LINC00963-215ENST00000622972 IGKCP01834 107 aa3.63□□□□□ -1.83
LINC00963-215ENST00000622972 SPINK6Q6UWN8 80 aa3.63□□□□□ -1.83
LINC00963-215ENST00000622972 LINC01600Q96MT4 127 aa3.63□□□□□ -1.83
LINC00963-215ENST00000622972 MAP1LC3CQ9BXW4 147 aa3.63□□□□□ -1.83
LINC00963-215ENST00000622972 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
LINC00963-215ENST00000622972 PET117Q6UWS5 81 aa3.62□□□□□ -1.83
LINC00963-215ENST00000622972 XAGE1AQ9HD64 81 aa3.62□□□□□ -1.83
LINC00963-215ENST00000622972 NDUFC2-KCTD14E9PQ53 114 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 F8WDY8 70 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 H3BRM9 83 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 LEPROTO15243 131 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 PLNP26678 52 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 GAGE2EQ4V326 116 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 C6orf226Q5I0X4 101 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 SOSTDC1Q6X4U4 206 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 PHF5AQ7RTV0 110 aaKnown RBP3.61□□□□□ -1.83
LINC00963-215ENST00000622972 PLEKHB2Q96CS7 222 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 LITAFQ99732 161 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 GAGE2DQ9UEU5 116 aa3.61□□□□□ -1.83
LINC00963-215ENST00000622972 A0A0U1RRA0 63 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 E9PLD3 99 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 J3QQQ9 107 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 PRSS2P07478 247 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 CKS1BP61024 79 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 C1orf137Q5JT78 98 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 ADAMTSL4-AS1Q5T5F5 129 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 FAM19A5Q7Z5A7 132 aaPredicted RBP3.6□□□□□ -1.83
LINC00963-215ENST00000622972 DAND5Q8N907 189 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 ERG28Q9UKR5 140 aa3.6□□□□□ -1.83
LINC00963-215ENST00000622972 S100A6P06703 90 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 SMIM13P0DJ93 91 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 PFN2P35080 140 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 CXCL5P42830 114 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 UBE2BP63146 152 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 PCP2Q8IVA1 136 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 SND1-IT1Q9HBX3 110 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 NDUFA12Q9UI09 145 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 PSORS1C2Q9UIG4 136 aa3.59□□□□□ -1.83
LINC00963-215ENST00000622972 A0A0J9YXY3 114 aa3.58□□□□□ -1.84
LINC00963-215ENST00000622972 VPREB1P12018 145 aa3.58□□□□□ -1.84
LINC00963-215ENST00000622972 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
LINC00963-215ENST00000622972 PYY3Q5JQD4 70 aa3.58□□□□□ -1.84
LINC00963-215ENST00000622972 IGLV5-37A0A075B6J1 123 aa3.57□□□□□ -1.84
LINC00963-215ENST00000622972 S100A2P29034 98 aa3.57□□□□□ -1.84
LINC00963-215ENST00000622972 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
LINC00963-215ENST00000622972 MIR7-3HGQ8N6C7 128 aa3.57□□□□□ -1.84
LINC00963-215ENST00000622972 DIRC1Q969H9 104 aa3.57□□□□□ -1.84
LINC00963-215ENST00000622972 M0QXV9 152 aa3.56□□□□□ -1.84
LINC00963-215ENST00000622972 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
LINC00963-215ENST00000622972 JOSD1Q15040 202 aaPredicted RBP3.56□□□□□ -1.84
LINC00963-215ENST00000622972 MPLKIPQ8TAP9 179 aa3.56□□□□□ -1.84
LINC00963-215ENST00000622972 C22orf24Q9Y442 160 aa3.56□□□□□ -1.84
LINC00963-215ENST00000622972 LOC107984156A0A0G2JMH3 177 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 MYMXA0A1B0GTQ4 84 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 GAGE10A6NGK3 116 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 ZNF815PA8K554 130 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 LGALS3P17931 250 aaKnown RBP3.55□□□□□ -1.84
LINC00963-215ENST00000622972 NMUP48645 174 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 HERVK_113P61574 105 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 NPC2P61916 151 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 ARL17AQ8IVW1 177 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 LINC00167Q96N53 147 aa3.55□□□□□ -1.84
LINC00963-215ENST00000622972 IGKV2-28A0A075B6P5 120 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 LOC105371267A0A1B0GV96 52 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 C20orf202A1L168 122 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 RPL37AP8A6NKH3 93 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 H0Y9J4 135 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 SCGB1D1O95968 90 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 IGKV2D-28P01615 120 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms