RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
SCAMP4-213ENST00000621748 TLX1NBP0CAT3 122 aa11.1□□□□□ -0.63
SCAMP4-213ENST00000621748 PFN2P35080 140 aa11.1□□□□□ -0.63
SCAMP4-213ENST00000621748 LINC00158P58513 81 aa11.1□□□□□ -0.63
SCAMP4-213ENST00000621748 SRSF9Q13242 221 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAMP4-213ENST00000621748 COX17Q14061 63 aa11.1□□□□□ -0.63
SCAMP4-213ENST00000621748 VAMP8Q9BV40 100 aa11.1□□□□□ -0.63
SCAMP4-213ENST00000621748 ERG28Q9UKR5 140 aa11.1□□□□□ -0.63
SCAMP4-213ENST00000621748 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
SCAMP4-213ENST00000621748 PHF5AQ7RTV0 110 aaKnown RBP11.09□□□□□ -0.63
SCAMP4-213ENST00000621748 FAM168BA1KXE4 195 aa11.08□□□□□ -0.64
SCAMP4-213ENST00000621748 GAGE2EQ4V326 116 aa11.08□□□□□ -0.64
SCAMP4-213ENST00000621748 SPINK6Q6UWN8 80 aa11.08□□□□□ -0.64
SCAMP4-213ENST00000621748 GAGE2DQ9UEU5 116 aa11.08□□□□□ -0.64
SCAMP4-213ENST00000621748 ANKRD39Q53RE8 183 aa11.07□□□□□ -0.64
SCAMP4-213ENST00000621748 SCGB1D4Q6XE38 83 aa11.07□□□□□ -0.64
SCAMP4-213ENST00000621748 LINC01600Q96MT4 127 aa11.07□□□□□ -0.64
SCAMP4-213ENST00000621748 PSORS1C2Q9UIG4 136 aa11.07□□□□□ -0.64
SCAMP4-213ENST00000621748 TSPEAR-AS2P59090 65 aa11.06□□□□□ -0.64
SCAMP4-213ENST00000621748 S100A12P80511 92 aa11.06□□□□□ -0.64
SCAMP4-213ENST00000621748 PLA2G2DQ9UNK4 145 aa11.05□□□□□ -0.64
SCAMP4-213ENST00000621748 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
SCAMP4-213ENST00000621748 IGKV2D-26A0A0A0MRZ7 120 aa11.04□□□□□ -0.64
SCAMP4-213ENST00000621748 A0A0U1RRA0 63 aa11.04□□□□□ -0.64
SCAMP4-213ENST00000621748 KRTAP7-1Q8IUC3 87 aa11.04□□□□□ -0.64
SCAMP4-213ENST00000621748 SMIM13P0DJ93 91 aa11.03□□□□□ -0.64
SCAMP4-213ENST00000621748 SPATA45Q537H7 98 aa11.03□□□□□ -0.64
SCAMP4-213ENST00000621748 FAM19A5Q7Z5A7 132 aaPredicted RBP11.03□□□□□ -0.64
SCAMP4-213ENST00000621748 KRTAP11-1Q8IUC1 163 aa11.03□□□□□ -0.64
SCAMP4-213ENST00000621748 PYY3Q5JQD4 70 aa11.02□□□□□ -0.65
SCAMP4-213ENST00000621748 MIEN1Q9BRT3 115 aa11.02□□□□□ -0.65
SCAMP4-213ENST00000621748 UBR4Q5T4S7 5183 aa11.02□□□□□ -0.65
SCAMP4-213ENST00000621748 A0A0J9YXY3 114 aa11.01□□□□□ -0.65
SCAMP4-213ENST00000621748 C1orf137Q5JT78 98 aa11.01□□□□□ -0.65
SCAMP4-213ENST00000621748 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
SCAMP4-213ENST00000621748 REG3GQ6UW15 175 aa11.01□□□□□ -0.65
SCAMP4-213ENST00000621748 XAGE1AQ9HD64 81 aa11□□□□□ -0.65
SCAMP4-213ENST00000621748 TMEM238C9JI98 176 aa10.99□□□□□ -0.65
SCAMP4-213ENST00000621748 KRTAP10-8P60410 259 aa10.99□□□□□ -0.65
SCAMP4-213ENST00000621748 PCP2Q8IVA1 136 aa10.99□□□□□ -0.65
SCAMP4-213ENST00000621748 COPS9Q8WXC6 57 aa10.99□□□□□ -0.65
SCAMP4-213ENST00000621748 TIMM17BO60830 172 aa10.98□□□□□ -0.65
SCAMP4-213ENST00000621748 RPL24P83731 157 aaKnown RBP10.98□□□□□ -0.65
SCAMP4-213ENST00000621748 MIR7-3HGQ8N6C7 128 aa10.98□□□□□ -0.65
SCAMP4-213ENST00000621748 TTTY13Q9BZ97 58 aa10.97□□□□□ -0.65
SCAMP4-213ENST00000621748 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
SCAMP4-213ENST00000621748 M0QXV9 152 aa10.96□□□□□ -0.65
SCAMP4-213ENST00000621748 COX8AP10176 69 aa10.96□□□□□ -0.65
SCAMP4-213ENST00000621748 IGLV7-43P04211 117 aa10.95□□□□□ -0.66
SCAMP4-213ENST00000621748 SMIM6P0DI80 62 aa10.95□□□□□ -0.66
SCAMP4-213ENST00000621748 SLC25A34Q6PIV7 304 aa10.95□□□□□ -0.66
SCAMP4-213ENST00000621748 NKAPP1Q8N9T2 125 aa10.95□□□□□ -0.66
SCAMP4-213ENST00000621748 C14orf144Q96I85 54 aa10.94□□□□□ -0.66
SCAMP4-213ENST00000621748 LOC105371267A0A1B0GV96 52 aa10.93□□□□□ -0.66
SCAMP4-213ENST00000621748 LBHQ53QV2 105 aaPredicted RBP10.93□□□□□ -0.66
SCAMP4-213ENST00000621748 Q6ZVH6 145 aa10.93□□□□□ -0.66
SCAMP4-213ENST00000621748 DLEU1O43261 78 aa10.92□□□□□ -0.66
SCAMP4-213ENST00000621748 UBE2BP63146 152 aa10.92□□□□□ -0.66
SCAMP4-213ENST00000621748 BOD1L2Q8IYS8 172 aa10.92□□□□□ -0.66
SCAMP4-213ENST00000621748 DAND5Q8N907 189 aa10.92□□□□□ -0.66
SCAMP4-213ENST00000621748 NPC2P61916 151 aa10.9□□□□□ -0.66
SCAMP4-213ENST00000621748 C22orf24Q9Y442 160 aa10.9□□□□□ -0.66
SCAMP4-213ENST00000621748 IFITM1P13164 125 aa10.89□□□□□ -0.67
SCAMP4-213ENST00000621748 DIRC1Q969H9 104 aa10.89□□□□□ -0.67
SCAMP4-213ENST00000621748 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
SCAMP4-213ENST00000621748 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
SCAMP4-213ENST00000621748 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
SCAMP4-213ENST00000621748 HIST1H4GQ99525 98 aa10.88□□□□□ -0.67
SCAMP4-213ENST00000621748 H0Y9J4 135 aa10.87□□□□□ -0.67
SCAMP4-213ENST00000621748 LINC00308Q8TCZ7 52 aa10.87□□□□□ -0.67
SCAMP4-213ENST00000621748 LRP2P98164 4655 aa10.87□□□□□ -0.67
SCAMP4-213ENST00000621748 UQCR10Q9UDW1 63 aa10.86□□□□□ -0.67
SCAMP4-213ENST00000621748 MRPL55Q7Z7F7 128 aaKnown RBP10.85□□□□□ -0.67
SCAMP4-213ENST00000621748 LITAFQ99732 161 aa10.85□□□□□ -0.67
SCAMP4-213ENST00000621748 SPANXB1Q9NS25 103 aaPredicted RBP10.85□□□□□ -0.67
SCAMP4-213ENST00000621748 TP73-AS1Q9UF72 201 aa10.85□□□□□ -0.67
SCAMP4-213ENST00000621748 IGLV5-37A0A075B6J1 123 aa10.83□□□□□ -0.68
SCAMP4-213ENST00000621748 LOC107984156A0A0G2JMH3 177 aa10.83□□□□□ -0.68
SCAMP4-213ENST00000621748 M0R378 163 aa10.83□□□□□ -0.68
SCAMP4-213ENST00000621748 NDUFC2O95298 119 aa10.83□□□□□ -0.68
SCAMP4-213ENST00000621748 ARL17AQ8IVW1 177 aa10.83□□□□□ -0.68
SCAMP4-213ENST00000621748 PRR26Q8N8Z3 221 aa10.83□□□□□ -0.68
SCAMP4-213ENST00000621748 C12orf57Q99622 126 aa10.83□□□□□ -0.68
SCAMP4-213ENST00000621748 HIGD1BQ9P298 99 aa10.83□□□□□ -0.68
SCAMP4-213ENST00000621748 GAGE10A6NGK3 116 aa10.82□□□□□ -0.68
SCAMP4-213ENST00000621748 NCR3O14931 201 aa10.82□□□□□ -0.68
SCAMP4-213ENST00000621748 VPREB1P12018 145 aa10.82□□□□□ -0.68
SCAMP4-213ENST00000621748 S100A7L2Q5SY68 101 aa10.82□□□□□ -0.68
SCAMP4-213ENST00000621748 MUSTN1Q8IVN3 82 aa10.82□□□□□ -0.68
SCAMP4-213ENST00000621748 LINC00518Q8N0U6 118 aa10.82□□□□□ -0.68
SCAMP4-213ENST00000621748 TSTD3H0UI37 97 aa10.81□□□□□ -0.68
SCAMP4-213ENST00000621748 KRTAP1-4P0C5Y4 121 aa10.81□□□□□ -0.68
SCAMP4-213ENST00000621748 CBY1Q9Y3M2 126 aa10.81□□□□□ -0.68
SCAMP4-213ENST00000621748 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
SCAMP4-213ENST00000621748 PPDPFQ9H3Y8 114 aa10.8□□□□□ -0.68
SCAMP4-213ENST00000621748 TRBV10-2A0A0K0K1G8 114 aa10.79□□□□□ -0.68
SCAMP4-213ENST00000621748 ZNF861PO60384 105 aa10.79□□□□□ -0.68
SCAMP4-213ENST00000621748 OR13C6PQ8NH95 151 aa10.79□□□□□ -0.68
SCAMP4-213ENST00000621748 PRO1933Q9H354 126 aa10.79□□□□□ -0.68
SCAMP4-213ENST00000621748 RPL37AP8A6NKH3 93 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms