RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 ZNF471Q9BX82 626 aaPredicted RBP2.67□□□□□ -1.98
LPCAT3-213ENST00000620843 MAP1LC3BQ9GZQ8 125 aa2.67□□□□□ -1.98
LPCAT3-213ENST00000620843 DPH3P1Q9H4G8 78 aa2.67□□□□□ -1.98
LPCAT3-213ENST00000620843 PKIGQ9Y2B9 76 aa2.67□□□□□ -1.98
LPCAT3-213ENST00000620843 C19orf71A6NCJ1 209 aa2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 M0QY20 66 aa2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 LINC00614P0C842 121 aa2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 IGLC6P0CF74 106 aa2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 TSPEAR-AS2P59090 65 aa2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 HERVK_113P63121 156 aa2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 COX6A2Q02221 97 aa2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 SPANXN1Q5VSR9 72 aa2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 RPL7L1Q6DKI1 246 aaKnown RBP2.66□□□□□ -1.98
LPCAT3-213ENST00000620843 BORCS7-ASMTA0A0B4J1R7 106 aa2.65□□□□□ -1.99
LPCAT3-213ENST00000620843 MGPP08493 103 aa2.65□□□□□ -1.99
LPCAT3-213ENST00000620843 SMIM17P0DL12 118 aa2.65□□□□□ -1.99
LPCAT3-213ENST00000620843 AKR1C8PQ5T2L2 129 aa2.65□□□□□ -1.99
LPCAT3-213ENST00000620843 LINC00474Q9P2X8 69 aa2.65□□□□□ -1.99
LPCAT3-213ENST00000620843 MUC2Q02817 5179 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 MUC21A0A140T8X8 626 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 UBE2L6O14933 153 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 PFDN1O60925 122 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 NKX2-5P52952 324 aaPredicted RBP2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 DEFA1P59665 94 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 DEFA3P59666 94 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 COTL1Q14019 142 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 CARD19Q96LW7 228 aa2.64□□□□□ -1.99
LPCAT3-213ENST00000620843 IGHV1-58A0A0C4DH39 117 aa2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 TINCRA0A1B0GVN0 87 aa2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 NCR2O95944 276 aa2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 TRGC1P0CF51 173 aa2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 ZNF25P17030 456 aaPredicted RBP2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 Q5BKY6 102 aa2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 CNFNQ9BYD5 112 aa2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 NIT2Q9NQR4 276 aa2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 PSORS1C2Q9UIG4 136 aa2.63□□□□□ -1.99
LPCAT3-213ENST00000620843 MUC17Q685J3 4493 aa2.62□□□□□ -1.99
LPCAT3-213ENST00000620843 FXYD6-FXYD2A0A087WZ82 144 aa2.62□□□□□ -1.99
LPCAT3-213ENST00000620843 RPL35P42766 123 aaKnown RBP2.62□□□□□ -1.99
LPCAT3-213ENST00000620843 RAB5CP51148 216 aa2.62□□□□□ -1.99
LPCAT3-213ENST00000620843 RPS20P60866 119 aaKnown RBP2.62□□□□□ -1.99
LPCAT3-213ENST00000620843 BAGE2Q86Y30 109 aa2.62□□□□□ -1.99
LPCAT3-213ENST00000620843 OR5A1Q8NGJ0 315 aa2.62□□□□□ -1.99
LPCAT3-213ENST00000620843 SPANXB1Q9NS25 103 aaPredicted RBP2.62□□□□□ -1.99
LPCAT3-213ENST00000620843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 TRAV26-2A0A0B4J265 109 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 IGKV3OR2-268A0A0C4DH90 116 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 LOC107984640A0A0U1RRK4 108 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 IGKV2-29A2NJV5 120 aaPredicted RBP2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 F2Z2F3 143 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 CCL25O15444 150 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 FGF6P10767 208 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 ZNF345Q14585 488 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 FAM19A5Q7Z5A7 132 aaPredicted RBP2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 OR2D3Q8NGH3 330 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 FAM213BQ8TBF2 198 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 MBD3L1Q8WWY6 194 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 DPH3Q96FX2 82 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 MANBALQ9NQG1 85 aa2.61□□□□□ -1.99
LPCAT3-213ENST00000620843 TRBV20OR9-2A0A075B6H5 130 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 TRBV6-5A0A0K0K1A5 114 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 LINC00959A0A1B0GUT2 108 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 UMAD1C9J7I0 102 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 APOMO95445 188 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 MT-ND6P03923 174 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 BCL2P10415 239 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 XCL1P47992 114 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 LYZL1Q6UWQ5 148 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 KCNRGQ8N5I3 272 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 NUP35Q8NFH5 326 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 DIRC1Q969H9 104 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 RPL39LQ96EH5 51 aaKnown RBP2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 LINC00526Q96FQ7 95 aa2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 PACRGQ96M98 296 aaPredicted RBP2.6□□□□□ -1.99
LPCAT3-213ENST00000620843 A0A1B0GV50 99 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 ARPC5O15511 151 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 GNG4P50150 75 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 EIF5AP63241 154 aaKnown RBP2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 CCL20P78556 96 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 C9orf116Q5BN46 136 aaPredicted RBP2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 EIF5AL1Q6IS14 154 aaKnown RBP2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 C9orf62Q8N4C0 152 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 Q8NDZ9 215 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 SFT2D1Q8WV19 159 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 TMEM242Q9NWH2 141 aa2.59□□□□□ -1.99
LPCAT3-213ENST00000620843 TRAV1-1A0A0B4J248 108 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 C7orf77A4D0Y5 90 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 I3L3M4 83 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 IFNA1P01562 189 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 SPAG11BQ08648 103 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 SS18Q15532 418 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 TEX261Q6UWH6 196 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 PHF5AQ7RTV0 110 aaKnown RBP2.58□□□□□ -2
LPCAT3-213ENST00000620843 TSKUQ8WUA8 353 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 BTF3L4Q96K17 158 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 BIN3Q9NQY0 253 aa2.58□□□□□ -2
LPCAT3-213ENST00000620843 CDC42SE2Q9NRR3 84 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms