RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 A0A0B4J2C4 111 aa7.38□□□□□ -1.23
POLR2A-209ENST00000617998 TMEM258P61165 79 aa7.38□□□□□ -1.23
POLR2A-209ENST00000617998 A0A087WSZ3 146 aa7.38□□□□□ -1.23
POLR2A-209ENST00000617998 FAM236AA0A1B0GUQ0 79 aa7.38□□□□□ -1.23
POLR2A-209ENST00000617998 FAM236BA0A1B0GV22 79 aa7.38□□□□□ -1.23
POLR2A-209ENST00000617998 SMIM11BQ8TCY0 68 aa7.38□□□□□ -1.23
POLR2A-209ENST00000617998 ENHOQ6UWT2 76 aa7.38□□□□□ -1.23
POLR2A-209ENST00000617998 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
POLR2A-209ENST00000617998 J3KT08 172 aa7.36□□□□□ -1.23
POLR2A-209ENST00000617998 BRK1Q8WUW1 75 aa7.36□□□□□ -1.23
POLR2A-209ENST00000617998 Q5VSD8 79 aa7.36□□□□□ -1.23
POLR2A-209ENST00000617998 Q8N9L7 120 aa7.36□□□□□ -1.23
POLR2A-209ENST00000617998 C6orf48Q9UBA6 75 aa7.36□□□□□ -1.23
POLR2A-209ENST00000617998 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
POLR2A-209ENST00000617998 IGKV2-30P06310 120 aa7.35□□□□□ -1.23
POLR2A-209ENST00000617998 CSNK1G2-AS1Q8NCQ2 148 aa7.35□□□□□ -1.23
POLR2A-209ENST00000617998 Q96NJ1 140 aa7.35□□□□□ -1.23
POLR2A-209ENST00000617998 CNFNQ9BYD5 112 aa7.35□□□□□ -1.23
POLR2A-209ENST00000617998 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
POLR2A-209ENST00000617998 HIGD1BQ9P298 99 aa7.33□□□□□ -1.24
POLR2A-209ENST00000617998 hDV103S1A0JD37 113 aa7.33□□□□□ -1.24
POLR2A-209ENST00000617998 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
POLR2A-209ENST00000617998 GAS8-AS1O95177 125 aa7.32□□□□□ -1.24
POLR2A-209ENST00000617998 PSORS1C2Q9UIG4 136 aa7.32□□□□□ -1.24
POLR2A-209ENST00000617998 GCN1Q92616 2671 aaKnown RBP7.32□□□□□ -1.24
POLR2A-209ENST00000617998 SPINK1P00995 79 aa7.32□□□□□ -1.24
POLR2A-209ENST00000617998 NTM-AS1Q6ZSK4 140 aa7.32□□□□□ -1.24
POLR2A-209ENST00000617998 IMUPQ9GZP8 106 aa7.32□□□□□ -1.24
POLR2A-209ENST00000617998 H3BT86 120 aa7.32□□□□□ -1.24
POLR2A-209ENST00000617998 IGIPA6NJ69 53 aa7.31□□□□□ -1.24
POLR2A-209ENST00000617998 MPLKIPQ8TAP9 179 aa7.31□□□□□ -1.24
POLR2A-209ENST00000617998 ZNF861PO60384 105 aa7.31□□□□□ -1.24
POLR2A-209ENST00000617998 C9orf92A6NGG3 77 aa7.31□□□□□ -1.24
POLR2A-209ENST00000617998 NDUFC2O95298 119 aa7.3□□□□□ -1.24
POLR2A-209ENST00000617998 RBM12B-AS1Q9P1G2 102 aa7.3□□□□□ -1.24
POLR2A-209ENST00000617998 FXYD2P54710 66 aa7.29□□□□□ -1.24
POLR2A-209ENST00000617998 WFDC2Q14508 124 aa7.29□□□□□ -1.24
POLR2A-209ENST00000617998 LINC00313P59037 77 aa7.29□□□□□ -1.24
POLR2A-209ENST00000617998 IGLV7-43P04211 117 aa7.29□□□□□ -1.24
POLR2A-209ENST00000617998 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
POLR2A-209ENST00000617998 COL6A5A8TX70 2615 aa7.28□□□□□ -1.24
POLR2A-209ENST00000617998 AMELXQ99217 191 aa7.28□□□□□ -1.24
POLR2A-209ENST00000617998 IGLV7-46A0A075B6I9 117 aa7.28□□□□□ -1.24
POLR2A-209ENST00000617998 DEFB116Q30KQ4 102 aa7.28□□□□□ -1.24
POLR2A-209ENST00000617998 NOTCH1P46531 2555 aa7.27□□□□□ -1.25
POLR2A-209ENST00000617998 UTRNP46939 3433 aa7.26□□□□□ -1.25
POLR2A-209ENST00000617998 FAM19A4Q96LR4 140 aa7.26□□□□□ -1.25
POLR2A-209ENST00000617998 Q6ZSA8 131 aa7.26□□□□□ -1.25
POLR2A-209ENST00000617998 C10orf91Q5T1B1 145 aa7.26□□□□□ -1.25
POLR2A-209ENST00000617998 IGHV3OR16-9A0A0B4J2B5 98 aa7.25□□□□□ -1.25
POLR2A-209ENST00000617998 PRR15LQ9BU68 103 aa7.25□□□□□ -1.25
POLR2A-209ENST00000617998 LINC00575Q6W349 94 aa7.25□□□□□ -1.25
POLR2A-209ENST00000617998 COX8CQ7Z4L0 72 aa7.25□□□□□ -1.25
POLR2A-209ENST00000617998 TEN1Q86WV5 123 aa7.24□□□□□ -1.25
POLR2A-209ENST00000617998 A8MTW9 85 aa7.23□□□□□ -1.25
POLR2A-209ENST00000617998 MT-ATP8P03928 68 aa7.23□□□□□ -1.25
POLR2A-209ENST00000617998 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
POLR2A-209ENST00000617998 CENPEQ02224 2701 aa7.23□□□□□ -1.25
POLR2A-209ENST00000617998 IGLV1-50A0A075B6I6 118 aa7.23□□□□□ -1.25
POLR2A-209ENST00000617998 FAM168BA1KXE4 195 aa7.23□□□□□ -1.25
POLR2A-209ENST00000617998 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
POLR2A-209ENST00000617998 TP73-AS1Q9UF72 201 aa7.22□□□□□ -1.25
POLR2A-209ENST00000617998 TRIAP1O43715 76 aa7.22□□□□□ -1.25
POLR2A-209ENST00000617998 TEX15Q9BXT5 2789 aa7.22□□□□□ -1.25
POLR2A-209ENST00000617998 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.26
POLR2A-209ENST00000617998 KIAA0087Q14695 138 aa7.21□□□□□ -1.26
POLR2A-209ENST00000617998 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
POLR2A-209ENST00000617998 GIG44P09565 113 aaPredicted RBP7.2□□□□□ -1.26
POLR2A-209ENST00000617998 HCG22E2RYF7 251 aa7.2□□□□□ -1.26
POLR2A-209ENST00000617998 ATOX1O00244 68 aa7.19□□□□□ -1.26
POLR2A-209ENST00000617998 KLK9Q2XQG4 91 aa7.19□□□□□ -1.26
POLR2A-209ENST00000617998 C7orf65Q6ZTY9 151 aa7.19□□□□□ -1.26
POLR2A-209ENST00000617998 BPTFQ12830 3046 aa7.19□□□□□ -1.26
POLR2A-209ENST00000617998 CR1P17927 2039 aa7.18□□□□□ -1.26
POLR2A-209ENST00000617998 Q6ZRX8 168 aa7.18□□□□□ -1.26
POLR2A-209ENST00000617998 ST20-AS1Q8NBB2 130 aa7.18□□□□□ -1.26
POLR2A-209ENST00000617998 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
POLR2A-209ENST00000617998 OXTP01178 125 aa7.17□□□□□ -1.26
POLR2A-209ENST00000617998 UNC79Q9P2D8 2635 aa7.16□□□□□ -1.26
POLR2A-209ENST00000617998 ATP5EP2Q5VTU8 51 aa7.16□□□□□ -1.26
POLR2A-209ENST00000617998 TAX1BP3O14907 124 aa7.16□□□□□ -1.26
POLR2A-209ENST00000617998 SDIM1Q6ZPB5 146 aa7.16□□□□□ -1.26
POLR2A-209ENST00000617998 CNBPP62633 177 aaKnown RBP7.16□□□□□ -1.26
POLR2A-209ENST00000617998 ZNF292O60281 2723 aa7.16□□□□□ -1.26
POLR2A-209ENST00000617998 C20orf197Q8N268 126 aa7.15□□□□□ -1.27
POLR2A-209ENST00000617998 LINC00612Q8N6U2 182 aa7.14□□□□□ -1.27
POLR2A-209ENST00000617998 OBSCN-AS1Q96MR7 158 aa7.14□□□□□ -1.27
POLR2A-209ENST00000617998 ANAPC11Q9NYG5 84 aa7.14□□□□□ -1.27
POLR2A-209ENST00000617998 CHD6Q8TD26 2715 aa7.13□□□□□ -1.27
POLR2A-209ENST00000617998 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
POLR2A-209ENST00000617998 COA6Q5JTJ3 125 aaKnown RBP7.13□□□□□ -1.27
POLR2A-209ENST00000617998 IGLV6-57P01721 117 aa7.13□□□□□ -1.27
POLR2A-209ENST00000617998 C15orf56Q8N910 161 aa7.13□□□□□ -1.27
POLR2A-209ENST00000617998 SERTAD4-AS1Q5TG53 156 aa7.12□□□□□ -1.27
POLR2A-209ENST00000617998 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
POLR2A-209ENST00000617998 LINC00208Q96KT6 92 aa7.12□□□□□ -1.27
POLR2A-209ENST00000617998 PRR34Q9NV39 138 aa7.12□□□□□ -1.27
POLR2A-209ENST00000617998 TRBV7-6A0A0J9YX20 115 aa7.11□□□□□ -1.27
POLR2A-209ENST00000617998 PRRC2CQ9Y520 2896 aaKnown RBP7.11□□□□□ -1.27
POLR2A-209ENST00000617998 IGSF10Q6WRI0 2623 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms