RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
IRF1-211ENST00000613424 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
IRF1-211ENST00000613424 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
IRF1-211ENST00000613424 LINC00587B1AMM8 73 aa10.28□□□□□ -0.76
IRF1-211ENST00000613424 PSORS1C2Q9UIG4 136 aa10.28□□□□□ -0.76
IRF1-211ENST00000613424 UBE2BP63146 152 aa10.27□□□□□ -0.77
IRF1-211ENST00000613424 TP73-AS1Q9UF72 201 aa10.27□□□□□ -0.77
IRF1-211ENST00000613424 MYCBP2O75592 4640 aa10.26□□□□□ -0.77
IRF1-211ENST00000613424 LBHQ53QV2 105 aaPredicted RBP10.26□□□□□ -0.77
IRF1-211ENST00000613424 MRPL55Q7Z7F7 128 aaKnown RBP10.26□□□□□ -0.77
IRF1-211ENST00000613424 ATOH7Q8N100 152 aa10.26□□□□□ -0.77
IRF1-211ENST00000613424 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
IRF1-211ENST00000613424 IGKV2D-26A0A0A0MRZ7 120 aa10.25□□□□□ -0.77
IRF1-211ENST00000613424 AKR1D1P51857 326 aa10.25□□□□□ -0.77
IRF1-211ENST00000613424 MIR7-3HGQ8N6C7 128 aa10.25□□□□□ -0.77
IRF1-211ENST00000613424 FLG2Q5D862 2391 aaPredicted RBP10.25□□□□□ -0.77
IRF1-211ENST00000613424 VPREB1P12018 145 aa10.24□□□□□ -0.77
IRF1-211ENST00000613424 C1orf137Q5JT78 98 aa10.24□□□□□ -0.77
IRF1-211ENST00000613424 LINC00167Q96N53 147 aa10.24□□□□□ -0.77
IRF1-211ENST00000613424 A0A0J9YXY3 114 aa10.23□□□□□ -0.77
IRF1-211ENST00000613424 RPL24P83731 157 aaKnown RBP10.23□□□□□ -0.77
IRF1-211ENST00000613424 NKAPP1Q8N9T2 125 aa10.23□□□□□ -0.77
IRF1-211ENST00000613424 Q8NDZ9 215 aa10.23□□□□□ -0.77
IRF1-211ENST00000613424 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
IRF1-211ENST00000613424 DAND5Q8N907 189 aa10.22□□□□□ -0.77
IRF1-211ENST00000613424 FAT3Q8TDW7 4589 aa10.22□□□□□ -0.77
IRF1-211ENST00000613424 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.77
IRF1-211ENST00000613424 GAGE10A6NGK3 116 aa10.21□□□□□ -0.77
IRF1-211ENST00000613424 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.77
IRF1-211ENST00000613424 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.77
IRF1-211ENST00000613424 RPL37AP8A6NKH3 93 aa10.2□□□□□ -0.78
IRF1-211ENST00000613424 ZNF815PA8K554 130 aa10.2□□□□□ -0.78
IRF1-211ENST00000613424 ADAMTSL4-AS1Q5T5F5 129 aa10.19□□□□□ -0.78
IRF1-211ENST00000613424 BOD1L2Q8IYS8 172 aa10.19□□□□□ -0.78
IRF1-211ENST00000613424 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
IRF1-211ENST00000613424 IGLV7-43P04211 117 aa10.18□□□□□ -0.78
IRF1-211ENST00000613424 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
IRF1-211ENST00000613424 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
IRF1-211ENST00000613424 SCGB1D1O95968 90 aa10.17□□□□□ -0.78
IRF1-211ENST00000613424 IGLV1-50A0A075B6I6 118 aa10.15□□□□□ -0.78
IRF1-211ENST00000613424 IGKV2-28A0A075B6P5 120 aa10.15□□□□□ -0.78
IRF1-211ENST00000613424 TIMM17BO60830 172 aa10.15□□□□□ -0.78
IRF1-211ENST00000613424 IGKV2D-28P01615 120 aa10.15□□□□□ -0.78
IRF1-211ENST00000613424 LITAFQ99732 161 aa10.15□□□□□ -0.78
IRF1-211ENST00000613424 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
IRF1-211ENST00000613424 HSBP1L1C9JCN9 74 aa10.14□□□□□ -0.79
IRF1-211ENST00000613424 M0R378 163 aa10.14□□□□□ -0.79
IRF1-211ENST00000613424 NPC2P61916 151 aa10.14□□□□□ -0.79
IRF1-211ENST00000613424 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
IRF1-211ENST00000613424 OXTP01178 125 aa10.13□□□□□ -0.79
IRF1-211ENST00000613424 SOSTDC1Q6X4U4 206 aa10.13□□□□□ -0.79
IRF1-211ENST00000613424 MIEN1Q9BRT3 115 aa10.13□□□□□ -0.79
IRF1-211ENST00000613424 TMA7Q9Y2S6 64 aaKnown RBP10.13□□□□□ -0.79
IRF1-211ENST00000613424 NCR3O14931 201 aa10.12□□□□□ -0.79
IRF1-211ENST00000613424 EIF4EBP3O60516 100 aaPredicted RBP10.12□□□□□ -0.79
IRF1-211ENST00000613424 SCGB1D4Q6XE38 83 aa10.12□□□□□ -0.79
IRF1-211ENST00000613424 BCE1O60756 84 aa10.11□□□□□ -0.79
IRF1-211ENST00000613424 LINC00308Q8TCZ7 52 aa10.1□□□□□ -0.79
IRF1-211ENST00000613424 TMEM238C9JI98 176 aa10.09□□□□□ -0.79
IRF1-211ENST00000613424 ZNF861PO60384 105 aa10.09□□□□□ -0.79
IRF1-211ENST00000613424 NDUFC2O95298 119 aa10.09□□□□□ -0.79
IRF1-211ENST00000613424 REG3GQ6UW15 175 aa10.09□□□□□ -0.79
IRF1-211ENST00000613424 DIRC1Q969H9 104 aa10.09□□□□□ -0.79
IRF1-211ENST00000613424 J3QL48 77 aa10.08□□□□□ -0.8
IRF1-211ENST00000613424 TMEM126AQ9H061 195 aa10.08□□□□□ -0.8
IRF1-211ENST00000613424 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
IRF1-211ENST00000613424 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
IRF1-211ENST00000613424 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
IRF1-211ENST00000613424 SPANXB1Q9NS25 103 aaPredicted RBP10.07□□□□□ -0.8
IRF1-211ENST00000613424 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
IRF1-211ENST00000613424 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
IRF1-211ENST00000613424 H0Y9J4 135 aa10.06□□□□□ -0.8
IRF1-211ENST00000613424 RPL28P46779 137 aaKnown RBP10.06□□□□□ -0.8
IRF1-211ENST00000613424 LINC01600Q96MT4 127 aa10.05□□□□□ -0.8
IRF1-211ENST00000613424 KCNQ1DNQ9H478 68 aa10.05□□□□□ -0.8
IRF1-211ENST00000613424 TNXBP22105 4242 aa10.04□□□□□ -0.8
IRF1-211ENST00000613424 DDTP30046 118 aa10.04□□□□□ -0.8
IRF1-211ENST00000613424 UBE2AP49459 152 aa10.04□□□□□ -0.8
IRF1-211ENST00000613424 KRTAP13-1Q8IUC0 172 aa10.04□□□□□ -0.8
IRF1-211ENST00000613424 PRYO14603 147 aa10.03□□□□□ -0.8
IRF1-211ENST00000613424 Q6ZVH6 145 aa10.03□□□□□ -0.8
IRF1-211ENST00000613424 FAM19A1Q7Z5A9 133 aa10.03□□□□□ -0.8
IRF1-211ENST00000613424 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
IRF1-211ENST00000613424 IFITM1P13164 125 aa10.02□□□□□ -0.81
IRF1-211ENST00000613424 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
IRF1-211ENST00000613424 HERC1Q15751 4861 aa10.01□□□□□ -0.81
IRF1-211ENST00000613424 IGLV6-57P01721 117 aa10.01□□□□□ -0.81
IRF1-211ENST00000613424 MT1HL1P0DM35 61 aa10.01□□□□□ -0.81
IRF1-211ENST00000613424 COX8AP10176 69 aa10.01□□□□□ -0.81
IRF1-211ENST00000613424 PRLHP81277 87 aa10.01□□□□□ -0.81
IRF1-211ENST00000613424 MUSTN1Q8IVN3 82 aa10.01□□□□□ -0.81
IRF1-211ENST00000613424 PAM16Q9Y3D7 125 aa10.01□□□□□ -0.81
IRF1-211ENST00000613424 SPRR1AP35321 89 aa10□□□□□ -0.81
IRF1-211ENST00000613424 SPATA45Q537H7 98 aa10□□□□□ -0.81
IRF1-211ENST00000613424 COPS9Q8WXC6 57 aa10□□□□□ -0.81
IRF1-211ENST00000613424 S100A12P80511 92 aa9.99□□□□□ -0.81
IRF1-211ENST00000613424 PYY3Q5JQD4 70 aa9.99□□□□□ -0.81
IRF1-211ENST00000613424 VAMP8Q9BV40 100 aa9.99□□□□□ -0.81
IRF1-211ENST00000613424 PPDPFQ9H3Y8 114 aa9.99□□□□□ -0.81
IRF1-211ENST00000613424 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms