RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 ERG28Q9UKR5 140 aa6.65□□□□□ -1.34
LINC01954-201ENST00000607419 PAM16Q9Y3D7 125 aa6.65□□□□□ -1.34
LINC01954-201ENST00000607419 LOC107984640A0A0U1RRK4 108 aa6.64□□□□□ -1.35
LINC01954-201ENST00000607419 S100A12P80511 92 aa6.64□□□□□ -1.35
LINC01954-201ENST00000607419 COX17Q14061 63 aa6.64□□□□□ -1.35
LINC01954-201ENST00000607419 C9orf116Q5BN46 136 aaPredicted RBP6.64□□□□□ -1.35
LINC01954-201ENST00000607419 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
LINC01954-201ENST00000607419 NDUFC2-KCTD14E9PQ53 114 aa6.63□□□□□ -1.35
LINC01954-201ENST00000607419 LINC01620Q4KN68 170 aa6.63□□□□□ -1.35
LINC01954-201ENST00000607419 MEIG1Q5JSS6 88 aa6.63□□□□□ -1.35
LINC01954-201ENST00000607419 SDIM1Q6ZPB5 146 aa6.63□□□□□ -1.35
LINC01954-201ENST00000607419 PCP2Q8IVA1 136 aa6.63□□□□□ -1.35
LINC01954-201ENST00000607419 A0A0J9YXY3 114 aa6.62□□□□□ -1.35
LINC01954-201ENST00000607419 KRTAP29-1A8MX34 341 aaPredicted RBP6.62□□□□□ -1.35
LINC01954-201ENST00000607419 COX8AP10176 69 aa6.62□□□□□ -1.35
LINC01954-201ENST00000607419 PFN2P35080 140 aa6.62□□□□□ -1.35
LINC01954-201ENST00000607419 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
LINC01954-201ENST00000607419 DLEU1O43261 78 aa6.61□□□□□ -1.35
LINC01954-201ENST00000607419 LINC00158P58513 81 aa6.61□□□□□ -1.35
LINC01954-201ENST00000607419 RPL18AQ02543 176 aaKnown RBP6.61□□□□□ -1.35
LINC01954-201ENST00000607419 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
LINC01954-201ENST00000607419 Q6ZRP5 223 aa6.61□□□□□ -1.35
LINC01954-201ENST00000607419 BOD1L2Q8IYS8 172 aa6.61□□□□□ -1.35
LINC01954-201ENST00000607419 TIMM17BO60830 172 aa6.6□□□□□ -1.35
LINC01954-201ENST00000607419 SMIM13P0DJ93 91 aa6.6□□□□□ -1.35
LINC01954-201ENST00000607419 PTTG1IPP53801 180 aa6.6□□□□□ -1.35
LINC01954-201ENST00000607419 GAGE2BQ13066 116 aa6.6□□□□□ -1.35
LINC01954-201ENST00000607419 C14orf144Q96I85 54 aa6.6□□□□□ -1.35
LINC01954-201ENST00000607419 LINC00474Q9P2X8 69 aa6.6□□□□□ -1.35
LINC01954-201ENST00000607419 RNF213Q63HN8 5207 aa6.6□□□□□ -1.35
LINC01954-201ENST00000607419 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
LINC01954-201ENST00000607419 A0A096LNI7 61 aa6.59□□□□□ -1.35
LINC01954-201ENST00000607419 A0A0U1RRA0 63 aa6.59□□□□□ -1.35
LINC01954-201ENST00000607419 GAGE2EQ4V326 116 aa6.59□□□□□ -1.35
LINC01954-201ENST00000607419 SLC25A34Q6PIV7 304 aa6.59□□□□□ -1.35
LINC01954-201ENST00000607419 GAGE2DQ9UEU5 116 aa6.59□□□□□ -1.35
LINC01954-201ENST00000607419 IGKV2-24A0A0C4DH68 120 aa6.58□□□□□ -1.36
LINC01954-201ENST00000607419 TMEM238C9JI98 176 aa6.58□□□□□ -1.36
LINC01954-201ENST00000607419 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
LINC01954-201ENST00000607419 MIR7-3HGQ8N6C7 128 aa6.58□□□□□ -1.36
LINC01954-201ENST00000607419 C12orf57Q99622 126 aa6.58□□□□□ -1.36
LINC01954-201ENST00000607419 FAM30AQ9NZY2 134 aa6.58□□□□□ -1.36
LINC01954-201ENST00000607419 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
LINC01954-201ENST00000607419 Q6ZSA8 131 aa6.57□□□□□ -1.36
LINC01954-201ENST00000607419 SPACA4Q8TDM5 124 aa6.57□□□□□ -1.36
LINC01954-201ENST00000607419 LITAFQ99732 161 aa6.57□□□□□ -1.36
LINC01954-201ENST00000607419 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
LINC01954-201ENST00000607419 C9orf129Q5T035 196 aaKnown RBP6.56□□□□□ -1.36
LINC01954-201ENST00000607419 ADAMTSL4-AS1Q5T5F5 129 aa6.56□□□□□ -1.36
LINC01954-201ENST00000607419 Q6ZVH6 145 aa6.56□□□□□ -1.36
LINC01954-201ENST00000607419 LINC00518Q8N0U6 118 aa6.56□□□□□ -1.36
LINC01954-201ENST00000607419 DPH3Q96FX2 82 aa6.56□□□□□ -1.36
LINC01954-201ENST00000607419 SPANXDQ9BXN6 97 aa6.56□□□□□ -1.36
LINC01954-201ENST00000607419 XAGE1AQ9HD64 81 aa6.56□□□□□ -1.36
LINC01954-201ENST00000607419 SPANXCQ9NY87 97 aa6.56□□□□□ -1.36
LINC01954-201ENST00000607419 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
LINC01954-201ENST00000607419 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
LINC01954-201ENST00000607419 PANO1I0J062 215 aa6.55□□□□□ -1.36
LINC01954-201ENST00000607419 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
LINC01954-201ENST00000607419 DAND5Q8N907 189 aa6.55□□□□□ -1.36
LINC01954-201ENST00000607419 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
LINC01954-201ENST00000607419 HIGD1BQ9P298 99 aa6.55□□□□□ -1.36
LINC01954-201ENST00000607419 UQCR10Q9UDW1 63 aa6.55□□□□□ -1.36
LINC01954-201ENST00000607419 PLA2G2DQ9UNK4 145 aa6.55□□□□□ -1.36
LINC01954-201ENST00000607419 COPS9Q8WXC6 57 aa6.54□□□□□ -1.36
LINC01954-201ENST00000607419 MIEN1Q9BRT3 115 aa6.54□□□□□ -1.36
LINC01954-201ENST00000607419 TP73-AS1Q9UF72 201 aa6.54□□□□□ -1.36
LINC01954-201ENST00000607419 A0A087WYN8 130 aa6.53□□□□□ -1.36
LINC01954-201ENST00000607419 IFITM1P13164 125 aa6.53□□□□□ -1.36
LINC01954-201ENST00000607419 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
LINC01954-201ENST00000607419 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
LINC01954-201ENST00000607419 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
LINC01954-201ENST00000607419 PRO1933Q9H354 126 aa6.53□□□□□ -1.36
LINC01954-201ENST00000607419 PPDPFQ9H3Y8 114 aa6.53□□□□□ -1.36
LINC01954-201ENST00000607419 PLAC8Q9NZF1 115 aa6.53□□□□□ -1.36
LINC01954-201ENST00000607419 A0A1W2PNN7 141 aa6.52□□□□□ -1.37
LINC01954-201ENST00000607419 NPC2P61916 151 aa6.52□□□□□ -1.37
LINC01954-201ENST00000607419 C2orf91Q6ZV80 131 aa6.52□□□□□ -1.37
LINC01954-201ENST00000607419 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
LINC01954-201ENST00000607419 TSTD3H0UI37 97 aa6.51□□□□□ -1.37
LINC01954-201ENST00000607419 KRTAP10-4P60372 401 aaPredicted RBP6.51□□□□□ -1.37
LINC01954-201ENST00000607419 TAL2Q16559 108 aa6.51□□□□□ -1.37
LINC01954-201ENST00000607419 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
LINC01954-201ENST00000607419 SCXQ7RTU7 201 aa6.51□□□□□ -1.37
LINC01954-201ENST00000607419 FAM19A5Q7Z5A7 132 aaPredicted RBP6.51□□□□□ -1.37
LINC01954-201ENST00000607419 MUSTN1Q8IVN3 82 aa6.51□□□□□ -1.37
LINC01954-201ENST00000607419 CIRBP-AS1Q8TBR5 109 aa6.51□□□□□ -1.37
LINC01954-201ENST00000607419 HIST1H4GQ99525 98 aa6.51□□□□□ -1.37
LINC01954-201ENST00000607419 LRP2P98164 4655 aa6.5□□□□□ -1.37
LINC01954-201ENST00000607419 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
LINC01954-201ENST00000607419 NDUFC2O95298 119 aa6.5□□□□□ -1.37
LINC01954-201ENST00000607419 VPREB1P12018 145 aa6.5□□□□□ -1.37
LINC01954-201ENST00000607419 HNRNPA3P51991 378 aaKnown RBP6.5□□□□□ -1.37
LINC01954-201ENST00000607419 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
LINC01954-201ENST00000607419 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
LINC01954-201ENST00000607419 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
LINC01954-201ENST00000607419 TNXBP22105 4242 aa6.49□□□□□ -1.37
LINC01954-201ENST00000607419 M0QXV9 152 aa6.48□□□□□ -1.37
LINC01954-201ENST00000607419 LBHQ53QV2 105 aaPredicted RBP6.48□□□□□ -1.37
LINC01954-201ENST00000607419 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms